Species Distribution Models at Regional Scale: Cymodocea nodosa Seagrasses

Despite their ecological and socio-economic importance, seagrasses are often overlooked in comparison with terrestrial ecosystems. In the Canarian archipelago (Spain), Cymodocea nodosa is the best-established species, sustaining the most important marine ecosystem and providing ecosystem services (ES) of great relevance. Nevertheless, we lack accurate and standardized information regarding the distribution of this species and its ES supply. As a first step, the use of species distribution models is proposed. Various machine learning algorithms and ensemble model techniques were considered along with freely available remote sensing data to assess Cymodocea nodosa’s potential distribution. In a second step, we used InVEST software to estimate the ES provision by this phanerogam on a regional scale, providing spatially explicit monetary assessments and a habitat degradation characterization due to human impacts. The distribution models presented great predictive capabilities and statistical significance, while the ES estimations were in concordance with previous studies. The proposed methodology is presented as a useful tool for environmental management of important communities sensitive to human activities, such as C. nodosa meadows.En prensa0,64

Effect of the application of nematophagous fungus Purpureocillium lilacinum over nutrients availability on agricultural soil and yield of Avena sativa

Purpureocillium lilacinum effect on oat plants yield Tomo 48 • N° 2 • 2016 Rev. FCA UNCUYO. 2016. 48(2): 1-12. ISSN impreso 0370-4661. ISSN (en línea) 1853-8665. Effect of the application of nematophagous fungus Purpureocillium lilacinum over nutrients availability on agricultural soil and yield of Avena sativa Abstract In the present work the application effect of nematophagous fungus Purpureocillium lilacinum over the availability of soil nutrients and the yield of oats plants, using an agricultural soil was evaluated. Two experiments were conducted under greenhouse conditions, one with soil in natural conditions and other with autoclaved soil. In each experiment were handled two treatments with 20 replicates in a completely randomized design; one with the application of P. lilacinum and the other without the fungus application as a control. The soil chemical characteristics: pH, C, N, P, K, Ca, Fe, Cu and Zn were analyzed at the beginning and at the end of the experiment. The variables evaluated on oat plants were: height, fresh and dry weight, nutrients, number of spikelets per plant and the spikelets weight. There were no significant differences between treatments in plants height, the nutrient content of the soil and plants in both treatments, neither in fresh and dry weight in the experiment with natural conditions soil. The positive effect of fungus application was reflected on the greater fresh and dry weight in the experiment with autoclaved soil and the greater number and weight of spikelets of oat plants in both experiments. Keywords 2 T. Hernández-Leal, D. López-Lima, G. Carrión Revista de la Facultad de Ciencias Agrarias Resumen En el presente trabajo se evaluó el efecto de la aplicación del hongo nematófago Purpureocillium lilacinum sobre la disponibilidad de nutrimentos del suelo y el rendimiento de plantas de avena, utilizando un suelo agrícola. Se realizó dos experimentos bajo condiciones de invernadero, uno con suelo en condiciones naturales y otro con suelo esterilizado en autoclave. En cada experimento se manejó dos tratamientos con 20 repeticiones en un diseño completamente aleatorizado; uno con la aplicación de P. lilacinum y el otro sin aplicación del hongo como control. Las características químicas del suelo: pH, C, N, P, K, Ca, Mg, Na, Fe, Cu y Zn fueron analizadas al inicio y final del experimento. Las variables evaluadas en las plantas de avena fueron: altura, peso fresco y seco, contenido de nutrimentos, número de espiguillas por planta y el peso de espiguillas. No hubo diferencias significativas entre tratamientos en la altura, contenido de nutrimentos del suelo y de las plantas en ambos tratamientos, ni en peso fresco y seco en el experimento con suelo en condiciones naturales. El efecto positivo de la aplicación del hongo se reflejó en el mayor peso fresco y seco en el experimento con suelo esterilizado y en el mayor número y peso de espiguillas por planta en ambos tratamientos. Palabras clave fertilidad del suelo • fósforo • hongos filamentoso

Late Miocene to Quaternary Contourites and Mixed Depositional Systems in the Gulf of Cadiz and West Portugal related to the Mediterranean - Atlantic Exchange evolution: decoding bottom currents behaviour and oceanographic processes associated with gateways

Trabajo presentado en la 4th Deepwater Circulation Research Conference (4DWC), celebrada en Gran Bretaña en mayo de 2023

Late Miocene to Quaternary Contourites Depositional Systems in the Gulf of Cadiz and West Portugal related to the Mediterranean - Atlantic exchange evolution: decoding bottom currents behaviour and oceanographic processes associated with gateways

Trabajo presentado en European Geophysical Union EGU General Assembly 2023, celebrada en Viena (Austria) entre el 23 y el 28 de mayo de 2023.Contourite depositional systems (CDS) represent the sedimentary records of paleoceanographic circulation and paleoclimatic changes throughout the geological timescale. These records offer expanded but contingent information relative to their adjacent marine gateways, documenting changes in the intensity and the direction of modern-day and paleo-current pathways on multicentennial, millennial and million-year timescales. This study investigates the late Miocene to Quaternary CDSs from the Gulf of Cadiz towards the West Iberian margin after the exit of the past Betic and Rifian corridors and most recent Strait of Gibraltar, the key gateways for the Mediterranean – Atlantic exchange trough time. A summary of the key results is presented as a representative study case for decoding the long- and short-term behaviour of oceanographic processes related to gateways and their associated overflows.This project was funded by the JIP#1 within the framework of “The Drifters” Research Group at Royal Holloway University of London and related to the projects, CTM2016-75129-C3 (INPULSE) and PID2021-123825OB-I00 (ALGEMAR)

Identification of clinical variants beyond the exome in inborn errors of metabolism

Inborn errors of metabolism (IEM) constitute a huge group of rare diseases affecting 1 in every 1000 newborns. Next-generation sequencing has transformed the diagnosis of IEM, leading to its proposed use as a second-tier technology for confirming cases detected by clinical/biochemical studies or newborn screening. The diagnosis rate is, however, still not 100%. This paper reports the use of a personalized multi-omics (metabolomic, genomic and transcriptomic) pipeline plus functional genomics to aid in the genetic diagnosis of six unsolved cases, with a clinical and/or biochemical diagnosis of galactosemia, mucopolysaccharidosis type I (MPS I), maple syrup urine disease (MSUD), hyperphenylalaninemia (HPA), citrullinemia, or urea cycle deficiency. Eight novel variants in six genes were identified: six (four of them deep intronic) located in GALE, IDUA, PTS, ASS1 and OTC, all affecting the splicing process, and two located in the promoters of IDUA and PTS, thus affecting these genes’ expression. All the new variants were subjected to functional analysis to verify their pathogenic effects. This work underscores how the combination of different omics technologies and functional analysis can solve elusive cases in clinical practic

De novo design approaches targeting an envelope protein pocket to identify small molecules against dengue virus

Dengue fever is a mosquito-borne viral disease that has become a major public health concern worldwide. This disease presents with a wide range of clinical manifestations, from a mild cold-like illness to the more serious hemorrhagic dengue fever and dengue shock syndrome. Currently, neither an approved drug nor an effective vaccine for the treatment are available to fight the disease. The envelope protein (E) is a major component of the virion surface. This protein plays a key role during the viral entry process, constituting an attractive target for the development of antiviral drugs. The crystal structure of the E protein reveals the existence of a hydrophobic pocket occupied by the detergent n-octyl-β-d-glucoside (β-OG). This pocket lies at the hinge region between domains I and II and is important for the low pH-triggered conformational rearrangement required for the fusion of the virion with the host's cell. Aiming at the design of novel molecules which bind to E and act as virus entry inhibitors, we undertook a de novo design approach by “growing” molecules inside the hydrophobic site (β-OG). From more than 240000 small-molecules generated, the 2,4 pyrimidine scaffold was selected as the best candidate, from which one synthesized compound displayed micromolar activity. Molecular dynamics-based optimization was performed on this hit, and thirty derivatives were designed in silico, synthesized and evaluated on their capacity to inhibit dengue virus entry into the host cell. Four compounds were found to be potent antiviral compounds in the low-micromolar range. The assessment of drug-like physicochemical and in vitro pharmacokinetic properties revealed that compounds 3e and 3h presented acceptable solubility values and were stable in mouse plasma, simulated gastric fluid, simulated intestinal fluid, and phosphate buffered saline solution.Fil: Leal, Emilse Soledad. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Centro de Investigaciones en Bionanociencias "Elizabeth Jares Erijman"; ArgentinaFil: Adler, Natalia Sol. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Centro de Investigaciones en Bionanociencias "Elizabeth Jares Erijman"; Argentina. Universidad Austral. Facultad de Ciencias Biomédicas. Instituto de Investigaciones en Medicina Traslacional. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones en Medicina Traslacional; ArgentinaFil: Fernandez, Gabriela Araceli. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Centro de Investigaciones en Bionanociencias "Elizabeth Jares Erijman"; ArgentinaFil: Gebhard, Leopoldo German. Universidad Nacional de Quilmes. Departamento de Ciencia y Tecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Battini, Leandro. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Centro de Investigaciones en Bionanociencias "Elizabeth Jares Erijman"; ArgentinaFil: Aucar, María Gabriela. Universidad Austral. Facultad de Ciencias Biomédicas. Instituto de Investigaciones en Medicina Traslacional. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones en Medicina Traslacional; ArgentinaFil: Videla, Mariela. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Centro de Investigaciones en Bionanociencias "Elizabeth Jares Erijman"; ArgentinaFil: Monge, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Centro de Investigaciones en Bionanociencias "Elizabeth Jares Erijman"; ArgentinaFil: Hernández de los Ríos, Alejandro. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales; ArgentinaFil: Acosta Dávila, John. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales; ArgentinaFil: Morell, María L.. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales; ArgentinaFil: Cordo, Sandra Myriam. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales; ArgentinaFil: García, Cybele C.. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales; ArgentinaFil: Gamarnik, Andrea Vanesa. Fundación Instituto Leloir; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Cavasotto, Claudio Norberto. Universidad Austral. Facultad de Ciencias Biomédicas. Instituto de Investigaciones en Medicina Traslacional. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones en Medicina Traslacional; Argentina. Universidad Austral; ArgentinaFil: Bollini, Mariela. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Centro de Investigaciones en Bionanociencias "Elizabeth Jares Erijman"; Argentin

High accuracy 234U(n,f) cross section in the resonance energy region

New results are presented of the 234U neutron-induced fission cross section, obtained with high accuracy in the resonance region by means of two methods using the 235U(n,f) as reference. The recent evaluation of the 235U(n,f) obtained with SAMMY by L. C. Leal et al. (these Proceedings), based on previous n-TOF data [1], has been used to calculate the 234U(n,f) cross section through the 234U/235U ratio, being here compared with the results obtained by using the n-TOF neutron flux

Measurement of 73 Ge(n,γ) cross sections and implications for stellar nucleosynthesis

© 2019 The Author(s). Published by Elsevier B.V.73 Ge(n,γ) cross sections were measured at the neutron time-of-flight facility n_TOF at CERN up to neutron energies of 300 keV, providing for the first time experimental data above 8 keV. Results indicate that the stellar cross section at kT=30 keV is 1.5 to 1.7 times higher than most theoretical predictions. The new cross sections result in a substantial decrease of 73 Ge produced in stars, which would explain the low isotopic abundance of 73 Ge in the solar system.Peer reviewe

Neutron cross-sections for advanced nuclear systems : The n-TOF project at CERN

© Owned by the authors, published by EDP Sciences, 2014 This is an Open Access article distributed under the terms of the Creative Commons Attribution License 4.0, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly citedThe study of neutron-induced reactions is of high relevance in a wide variety of fields, ranging from stellar nucleosynthesis and fundamental nuclear physics to applications of nuclear technology. In nuclear energy, high accuracy neutron data are needed for the development of Generation IV fast reactors and accelerator driven systems, these last aimed specifically at nuclear waste incineration, as well as for research on innovative fuel cycles. In this context, a high luminosity Neutron Time Of Flight facility, n-TOF, is operating at CERN since more than a decade, with the aim of providing new, high accuracy and high resolution neutron cross-sections. Thanks to the features of the neutron beam, a rich experimental program relevant to nuclear technology has been carried out so far. The program will be further expanded in the near future, thanks in particular to a new high-flux experimental area, now under construction.Peer reviewedFinal Published versio

The measurement programme at the neutron time-of-flight facility n-TOF at CERN

Neutron-induced reaction cross sections are important for a wide variety of research fields ranging from the study of nuclear level densities, nucleosynthesis to applications of nuclear technology like design, and criticality and safety assessment of existing and future nuclear reactors, radiation dosimetry, medical applications, nuclear waste transmutation, accelerator-driven systems and fuel cycle investigations. Simulations and calculations of nuclear technology applications largely rely on evaluated nuclear data libraries. The evaluations in these libraries are based both on experimental data and theoretical models. CERN's neutron time-of-flight facility n-TOF has produced a considerable amount of experimental data since it has become fully operational with the start of its scientific measurement programme in 2001. While for a long period a single measurement station (EAR1) located at 185 m from the neutron production target was available, the construction of a second beam line at 20 m (EAR2) in 2014 has substantially increased the measurement capabilities of the facility. An outline of the experimental nuclear data activities at n-TOF will be presented