53 research outputs found

    On the Lebesgue constant of the trigonometric Floater-Hormann rational interpolant at equally spaced nodes

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    It is well known that the classical polynomial interpolation gives bad approximation if the nodes are equispaced. A valid alternative is the family of barycentric rational interpolants introduced by Berrut in [4], analyzed in terms of stability by Berrut and Mittelmann in [5] and their extension done by Floater and Hormann in [8]. In this paper firstly we extend them to the trigonometric case, then as in the Floater-Hormann classical interpolant, we study the growth of the Lebesgue constant on equally spaced points. We show that the growth is logarithmic providing a stable interpolation operato

    Effects of Stearoyl-CoA Desaturase 1 and Sterol Regulatory Element Binding Protein Gene Polymorphisms on Milk Production, Composition and Coagulation Properties of Individual Milk of Brown Swiss Cows

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    Associations between stearoyl-CoA desaturase (SCD) and sterol regulatory element binding protein (SREBP-1) gene polymorphisms and milk production, composition (fat, protein, and casein content), acidity (pH and titratable acidity) and coagulation properties (MCP), namely rennet coagulation time (RCT, min) and curd firmness (a30, mm) were investigated on individual Brown Swiss milk. A total of 294 cows from 16 herds and progeny of 15 sires were milk-sampled once. Th e additive effects of SCD and SREBP-1 genotypes on the aforementioned traits were analyzed through Bayesian linear models. The SCD gene was associated with protein content, casein content and a30. Lower protein, casein and a30 was observed for milk yielded by SCD V than A cows, whereas for other traits the effect was trivial. Animals carrying the L allele of SREBP-1 showed higher fat content than animals carrying the S allele. These results suggest a possible use of these loci in gene-assisted selection programs for the improvement of milk quality traits and MCP in Brown Swiss cattle, although large scale studies in different breeds are required

    Histological verification of positive positron emission tomography findings in the follow-up of patients with mediastinal lymphoma.

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    Background and Objectives Follow-ups of patients with mediastinal lymphoma are not accurate if they rely on computed tomography (CT). Positron emission tomography (PET) has been suggested to be useful in several lymphoma settings, such as initial staging, evaluation of residual masses after therapy, and assessment of response early in the course of treatment. The aim of this retrospective study was to verify the reliability of positive PET scans of the mediastinum in following up patients wirh mediastinal lymphoma, using histological findings as a comparison. Design and Methods From January 2002 to July 2005, 151 patients with mediastinal lymphoma (57 with Hodgkin's disease [HD] and 94 with aggressive non-Hodgkin's lymphoma [NHL]) were followed-up after the end of front-line treatment. Patients with a positive PET scan of the mediastinum underwent CT scanning and surgical biopsy. Results In 30 (21 HD and 9 NHL) out of 151 patients (20%) a suspicion of lymphoma relapse was raised based on positive mediastinal PET scanning. Histology confirmed this suspicion in 17 (10 HD and 7 NHL) out of 30 patients (57%), whereas either benign (9 fibrosis, 3 sarcoid-like granulomatosis) or unrelated neoplastic conditions (1 thymoma) were demonstrated in the remaining 13 patients (43%). SUVmax was significantly higher among patients who had signs of relapse (17 true positive cases) than among those who stayed in remission (13 false positive cases), the median values being 5.95 (range, 3.5–26.9) and 2.90 (range, 1.4–3.3), respectively ( p =0.01). Interpretation and Conclusions We suggest that a positive PET scan of the mediastinum of a patient being followed-up for a mediastinal lymphoma should not be considered sufficient for diagnostic purposes in view of its lack of discrimination. Histological confirmation can safely be carried out with various biopsy techniques, the choice of which should be made on the basis of the findings of the clinical and imaging studies of the individual case

    Genome-wide Analyses Identify KIF5A as a Novel ALS Gene

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    To identify novel genes associated with ALS, we undertook two lines of investigation. We carried out a genome-wide association study comparing 20,806 ALS cases and 59,804 controls. Independently, we performed a rare variant burden analysis comparing 1,138 index familial ALS cases and 19,494 controls. Through both approaches, we identified kinesin family member 5A (KIF5A) as a novel gene associated with ALS. Interestingly, mutations predominantly in the N-terminal motor domain of KIF5A are causative for two neurodegenerative diseases: hereditary spastic paraplegia (SPG10) and Charcot-Marie-Tooth type 2 (CMT2). In contrast, ALS-associated mutations are primarily located at the C-terminal cargo-binding tail domain and patients harboring loss-of-function mutations displayed an extended survival relative to typical ALS cases. Taken together, these results broaden the phenotype spectrum resulting from mutations in KIF5A and strengthen the role of cytoskeletal defects in the pathogenesis of ALS.Peer reviewe

    Common and rare variant association analyses in amyotrophic lateral sclerosis identify 15 risk loci with distinct genetic architectures and neuron-specific biology

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    A cross-ancestry genome-wide association meta-analysis of amyotrophic lateral sclerosis (ALS) including 29,612 patients with ALS and 122,656 controls identifies 15 risk loci with distinct genetic architectures and neuron-specific biology. Amyotrophic lateral sclerosis (ALS) is a fatal neurodegenerative disease with a lifetime risk of one in 350 people and an unmet need for disease-modifying therapies. We conducted a cross-ancestry genome-wide association study (GWAS) including 29,612 patients with ALS and 122,656 controls, which identified 15 risk loci. When combined with 8,953 individuals with whole-genome sequencing (6,538 patients, 2,415 controls) and a large cortex-derived expression quantitative trait locus (eQTL) dataset (MetaBrain), analyses revealed locus-specific genetic architectures in which we prioritized genes either through rare variants, short tandem repeats or regulatory effects. ALS-associated risk loci were shared with multiple traits within the neurodegenerative spectrum but with distinct enrichment patterns across brain regions and cell types. Of the environmental and lifestyle risk factors obtained from the literature, Mendelian randomization analyses indicated a causal role for high cholesterol levels. The combination of all ALS-associated signals reveals a role for perturbations in vesicle-mediated transport and autophagy and provides evidence for cell-autonomous disease initiation in glutamatergic neurons

    Il trasporto di colesterolo mediato dalle lipoproteine nel Sistema Nervoso Centrale come potenziale target farmacologico nella patologia di Alzheimer

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    STATE OF THE ART: AD is a multifactorial neurodegenerative disease clinically characterized by a progressive cognitive impairment. Alterations of cholesterol homeostasis in the central nervous system (CNS) have been associated to various neurodegenerative disorders, including Alzheimer's disease (AD), as shown by genomic-wide association studies that have identified several loci involved in lipid metabolism among AD susceptible genes. Among these, the apoE4 gene is the most important risk factor for Ad onset. Cholesterol synthesis in neurons is very high during embryogenesis, but it gets progressively lost in adult neurons, that rely on cholesterol produced from astrocytes for neuronal plasticity maintenance, synaptogenesis and regeneration after injury. CNS cholesterol trafficking between astrocytes and neurons is mediated by HDL-like particles, similar to plasma HDL, identified in human in the cerebrospinal fluid (CSF) and containing mainly apolipoprotein E (apoE). HDL-like particles interact with membrane cholesterol transporters such as the ATP-binding cassette transporters A1 and G1 (ABCA1 and ABCG1) and convey cholesterol from astrocytes to neurons. In this process, nascent discoidal particles are firstly secreted by astrocytes through the activity of the ABCA1 transporter; nascent particles successively undergo maturation through the activity of remodeling enzymes, such as lecithin cholesterol acyltransferase (LCAT) which esterifies cholesterol and catalyses the conversion of nascent discoidal into mature and spherical particles. Newly generated HDL-like particles can be finally uptaken by neurons through the binding of apoE to the LDL receptor and LDLR family receptors (LRP1, LDLR, VLDLR and apoER2). These receptors are sensitive to the degrading activity of the Proprotein convertase subtilisin/kexin type 9 (PCSK9), a serine protease firstly described to target hepatic low-density lipoprotein receptor (LDLr) but also identified in brain and detected in human cerebrospinal fluid. PCSK9 modified activity might in principle be involved in the derangement of brain cholesterol trafficking, in lipoprotein homeostasis and in AD pathogenesis. The genetic studies conducted so far in humans are not conclusive on the impact of PCSK9 mutations on AD. Although Wollmer and colleagues firstly identified PCSK9 among the cholesterol-related genes that has been matched with AD genes listed in the AlzGene database, no association was found between PCSK9 polymorphism and the risk of AD onset neither in a Japanese nor in a Swedish cohort study. Consistently, in a recent Mendelian randomization analysis, PCSK9 loss-of-function mutations were not associated to a raise in the risk of AD (Hazard Ratio (HR) = 0.50; p = 0.37). To a negative conclusion came also the results of genetic studies among African American REGARDS (Reasons for Geographic and Racial Differences in Stroke) participants with and without the PCSK9 loss-of-function variants C697X or Y142X. The presence of these variants did not affect the primary endpoint of the study, i.e. the neurocognitive performance. In another study conducted in French Canadian subjects, carriers of the PCSK9 loss of function mutations, R46L and InsLEU, did not differ from non-carriers as either AD prevalence or age of disease onset. In addition, two PCSK9 SNPs seems to predispose to increased AD risk although with a gender-specificity. Only few observations suggest that in neurodegenerative diseases cholesterol transport between astrocytes and neurons mediated by HDL-like particles may be altered. AIM: The objective of my PhD project was to establish, through a case-control study, whether the HDL-mediated cholesterol transport from astrocytes to neurons is defective in AD. To achieve this goal, we investigated cholesterol trafficking with a dual approach: from the astrocyte side we measured the ability of CSF HDL to promote cell cholesterol efflux through the transporters ABCA1 and ABCG1 (CSF cholesterol efflux capacity, CSF-CEC). From the neuronal point of view first, we measured PCSK9 levels in CSF of AD patients to evidence potential differences. After that, we also test the hypothesis that PCSK9 could be a pathogenetic factor in AD by studying the impact of PCSK9 on AD using an in vitro approach focusing on cholesterol uptake and expression of receptors modulating cholesterol homeostasis in the brain. MATERIAL AND METHODS: Controls (n=39) and sex and age-matched AD patients (n=37) were recruited. In addition, in order to verify if the potential alteration of cholesterol transport is specific for AD, we included in the analysis also subjects with non-AD-related dementia (DEM non-AD, n=16). CSF capacity to promote cholesterol efflux (CSF-CEC) was evaluated thought a radioisotopic technique analyzing transporters ABCA1 and ABCG1 by using specific cell models expressing the single transporters. CSF total apoE, apoE4, apoA-1 and PCSK9 were performed by ELISA kit. Reconstituted HDL (rHDL) containing apoE, were prepared using the cholate dialysis procedure containing ApoE⁄lecithin⁄cholesterol in molar ratio of 1:100:2. In parallel, liposomes made of PL and free cholesterol but without apolipoprotein E were prepared, to evaluate non-apolipoprotein-mediated uptake of cholesterol. Cholesterol uptake was analyzed in the lysates to determine the amount of labelled cholesterol incorporated by scintillation counting and expressed as CPM/mg proteins. LDLr and apoER2 protein expression was evaluated by Western Blot analyses while apoE-FITC internalization into cells was performed using the confocal laser scanning microscopy. RESULTS: The analysis of CSF total apoE and apoA-1 concentrations did not reveal differences between the three groups; conversely, levels of the isoform apoE4 were higher in CSF of AD subjects compared to controls (+3,9 fold; p=0.0068). CSF-CEC through AD did not differ between the three groups except for a slight but significant decrease in DEM non-AD subject compared to controls (- 40%; p=0,002). CSF- CEC through ABCA1 was reduced in AD patients compared to controls (-73%; p=0,001) while no difference was found with DEM non-AD and also CSF-CEC through ABCG1 was significantly reduced in AD subjects (-33; p=0,004). CSF-CEC in DEM non-AD thought these two pathways was similar to controls. We have also stratified the CSF-CEC values according on their apoE phenotype founding no differences in CSF ABCA1-CEC and ABCG1-CEC between carriers and non- carriers of the apoE4 genotype. We found a positive relationship between ABCG1-CEC with Aβ1-42 amyloid levels (p=0,025; r=0,305). Moreover, we found an inverse relationship between ABCA1-CEC and total Tau and phospho-tau levels (p=0,018; r=0,348 and p=0,048; r=0,294). In addition, the analysis of CSF revealed that PCSK9 levels were significantly higher in AD patients than in controls (+1.65 fold; p=0.0106). With respect to the relationship between PCSK9 and apoE in CSF, considering all samples analyzed, PCSK9 did not significantly correlate with total apoE (p=0.285) but it positively correlated with apoE4 levels (r2=0,445; p=0,0065). Interestingly we found that CSF PCSK9 levels were higher in APOE Ɛ4 carriers among both non-AD and AD subjects, reaching statistical significance in the AD group (+1.53 fold; p=0.05). We also evaluated the modulating effect of exogenous PCSK9 on brain cholesterol homeostasis by in vitro studies. For this reason, apoE containing particles (rHDL- apoE) were prepared and based on previous published data, we expected a size of 0.9nm. Although the size was not directly verified, from literature we know that such particle are able to promote cholesterol efflux through ABCG1 and aqueous diffusion but not through ABCA1. For this reason, ApoE containing particles (rHDL- apoE) functionality was measured for their capacity to promote cholesterol efflux through ABCA1, ABCG1 and aqueous diffusion in different cell models. As expected from the predicted size, apoE-containing sHDL were able to produce a significant cholesterol efflux through ABCG1 pathway and aqueous diffusion. On the other hand, these apoE- containing particles were not able to promote cholesterol efflux through ABCA1 as mentioned for apoAI, the favorite acceptor through this pathway. In order to mimic the degrading effect of PCSK9 on LDLR-family, that internalized rHDL-apoE in neurons, we tested the capacity of rHDL-apoE to be internalized by fibroblast from control patients (ctrl) and from patients with homozygous familiar hypercholesterolemia (FH) that are characterized by the absence of the low-density lipoprotein receptor (LDLR), as it would occur as a consequence of the degrading activity of PACK9. We found that rHDL-apoE (30-60nm) uptake from fibroblast FH was markedly reduced compared to fibroblast ctrl (p<0,0001 for both concentrations) while liposomes prepared without apoE display a similar uptake between fibroblast ctrl and FH. We also evaluated the capacity of rHDL-apoE to be internalized in a macrophage cell line overexpressing PCSK9 (J774 CTRL and J774 PCSK9) and we observed that the uptake of rHDL-apoE was significantly reduced in J774 overexpressing PCSK9 compared to the CTRL ones. Also, in this cellular system, liposomes without apoE are not able to produce a reduction in cholesterol uptake in J774 PCSK9 compared to control J774. We investigated the rHDL-apoE uptake into SH-SY5Y human neuroblastoma cells differentiated into neurons and we found that the uptake was significant and occurred in a concentration-dependent manner. After the generation of a cellular model of SH-SY5Y overexpressing or not PCSK9, we first evaluated the protein expression and the secretion of PCSK9 from these cells. In differentiated SH-SY5Y overexpressing PCSK9, the uptake of rHDL-apoE [60 and 120nM] was reduce compared to control cells (p= 0.0232 and p=0.005 respectively) and dependent from apoE since rHDL without apoE displayed a similar uptake. We analyzed the expression of two receptor involved in PCSK9 degrading activity, LDLr and apoER2, finding that differentiated PCSK9 cells displayed a lower expression of both receptors (for both p<0.05). Moreover, in the same cellular model, we observe the interaction between fluorescinated-apoE and neuronal cells thought confocal laser scanning microscopy. The first event observed was the appearance of granular pattern and widespread fluorescence in both SH-SY5Y control and PCSK9 overexpressing cells. After 90 minutes a morphological evidence between the two cell types were observed with fluorescent grains distributed along the cell membrane to outline the cells that become more evident in the SH- SY5Y control compared to PCSK9. CONCLUSIONS: Our results of the case-control study indicate that, despite no change in CSF apoE concentrations, possibly reflecting no change in HDL levels, an impairment of CSF capacity to promote cholesterol efflux specifically occurs in AD. These findings, together with increased PCSK9 levels in AD patients and the correlations found with the typical neurobiomarkers, reinforce the idea that alterations of brain cholesterol transport may play an important role in AD pathogenesis. With respect to CSF PCSK9 evaluation, our results showed for the first time an alteration of CSF PCSK9 levels in AD and suggest a pathophysiological link between PCSK9, apoE4, and AD. To better understand mechanism involved in the pathophysiological role of PCSK9. In addition, our in vitro findings, although preliminary, indicate that PCSK9 can negatively modulate the uptake of cholesterol possibly by reducing the expression of the apoE-receptors. Future experiments will aim to clarify mechanistic insights on the possible pathogenetic role of PCSK9 in the brain

    Representations of Citizens/hip in 230 Years of American History. A Diachronic Corpus-assisted Approach

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    The paper examines how American presidents have discursively constructed citizens (and citizenship) over more than two hundred years of American political history from an interdisciplinary perspective. As one deeply contested concept in different political arenas (Wiesner et al 2017), involving aspects of collective identities, citizens/hip has been at the very heart of Western democracies since ancient times, although its significance has gradually increased in modern periods (Marshall 1950, Bayley et al. 2013)

    Drug-drug interactions in polypharmacy patients: The impact of renal impairment

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    Chronic kidney disease (CKD) is a long-term condition characterized by a gradual loss of kidney functions, usually accompanied by other comorbidities including cardiovascular diseases (hypertension, heart failure and stroke) and diabetes mellitus. Therefore, multiple pharmacological prescriptions are very common in these patients. Epidemiological and clinical observations have shown that polypharmacy may increase the probability of adverse drug reactions (ADRs), possibly through a higher risk of drug-drug interactions (DDIs). Renal impairment may further worsen this scenario by affecting the physiological and biochemical pathways underlying pharmacokinetics and ultimately modifying the pharmacodynamic responses. It has been estimated that the prevalence of DDIs in CKD patients ranged between 56.9% and 89.1%, accounting for a significant increase in healthcare costs, length and frequency of hospitalization, with a detrimental impact on health and quality of life of these patients. Despite these recognized high-risk conditions, scientific literature released on this topic is still limited. Basing on the most commonly prescribed therapies in patients with CKD, the present short review summarizes the current state of knowledge of the putative DDIs occurring in CKD patients undergoing polytherapy. The most relevant underlying mechanisms and their clinical significance are also debated

    Clustering of gold atoms in ion-implanted silica after thermal annealing in different atmospheres

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    The clustering process of gold atoms in ion-implanted silica, during annealing in different atmospheres, is experimentally investigated and phenomenologically described. With respect to inert (Ar) or reducing (H2-Ar) atmosphere, annealing in oxidizing (air) atmosphere is the most effective in promoting cluster formation above 700\u2013800\ub0C due to a thermally activated correlated diffusion of gold atoms and excess oxygen molecules coming from the atmosphere

    Two stages in the kinetics of gold cluster growth in ion-implanted silica during isothermal annealing in oxidizing atmosphere

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    The growth kinetics of gold clusters, formed by ion implantation in silica, is experimentally investigated. Isothermal sample annealing at 900 \ub0C is performed in air atmosphere for increasing time intervals in the range between 0.5 and 12 h. Two different scaling laws of the cluster average radius with time, t1/2 and t1/3, are evidenced, proving that coarsening, i.e., Ostwald ripening, follows the stage of diffusion limited cluster growth, as the annealing time interval increases. By a comparative analysis of the two regimes of cluster growth, in the framework of linearized models for clustering processes, the value of the surface tension of gold nanoparticles in silica matrix has been evaluated
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