Divergence-time estimates for hominins provide insight into encephalization and body mass trends in human evolution

Quantifying speciation times during human evolution is fundamental as it provides a timescale to test for the correlation between key evolutionary transitions and extrinsic factors such as climatic or environmental change. Here, we applied a total evidence dating approach to a hominin phylogeny to estimate divergence times under different topological hypotheses. The time-scaled phylogenies were subsequently used to perform ancestral state reconstructions of body mass and phylogenetic encephalization quotient (PEQ). Our divergence-time estimates are consistent with other recent studies that analysed extant species. We show that the origin of the genus Homo probably occurred between 4.30 and 2.56 million years ago. The ancestral state reconstructions show a general trend towards a smaller body mass before the emergence of Homo, followed by a trend towards a greater body mass. PEQ estimations display a general trend of gradual but accelerating encephalization evolution. The obtained results provide a rigorous temporal framework for human evolution

Evolution of arboreality and fossoriality in squirrels and aplodontid rodents: Insights from the semicircular canals of fossil rodents

Reconstructing locomotor behaviour for fossil animals is typically done with postcranial elements. However, for species only known from cranial material, locomotor behaviour is difficult to reconstruct. The semicircular canals (SCCs) in the inner ear provide insight into an animal's locomotor agility. A relationship exists between the size of the SCCs relative to body mass and the jerkiness of an animal's locomotion. Additionally, studies have also demonstrated a relationship between SCC orthogonality and angular head velocity. Here, we employ two metrics for reconstructing locomotor agility, radius of curvature dimensions and SCC orthogonality, in a sample of twelve fossil rodents from the families Ischyromyidae, Sciuridae and Aplodontidae. The method utilizing radius of curvature dimensions provided a reconstruction of fossil rodent locomotor behaviour that is more consistent with previous studies assessing fossil rodent locomotor behaviour compared to the method based on SCC orthogonality. Previous work on ischyromyids suggests that this group displayed a variety of locomotor modes. Members of Paramyinae and Ischyromyinae have relatively smaller SCCs and are reconstructed to be relatively slower compared to members of Reithroparamyinae. Early members of the Sciuroidea clade including the sciurid Cedromus wilsoni and the aplodontid Prosciurus relictus are reconstructed to be more agile than ischyromyids, in the range of extant arboreal squirrels. This reconstruction supports previous inferences that arboreality was likely an ancestral trait for this group. Derived members of Sciuridae and Aplodontidae vary in agility scores. The fossil squirrel Protosciurus cf. rachelae is inferred from postcranial material as arboreal, which is in agreement with its high agility, in the range of extant arboreal squirrels. In contrast, the fossil aplodontid Mesogaulus paniensis has a relatively low agility score, similar to the fossorial Aplodontia rufa, the only living aplodontid rodent. This result is in agreement with its postcranial reconstruction as fossorial and with previous indications that early aplodontids were more arboreal than their burrowing descendants

Familial hypercholesterolaemia in children and adolescents from 48 countries: a cross-sectional study

Background: Approximately 450 000 children are born with familial hypercholesterolaemia worldwide every year, yet only 2·1% of adults with familial hypercholesterolaemia were diagnosed before age 18 years via current diagnostic approaches, which are derived from observations in adults. We aimed to characterise children and adolescents with heterozygous familial hypercholesterolaemia (HeFH) and understand current approaches to the identification and management of familial hypercholesterolaemia to inform future public health strategies. Methods: For this cross-sectional study, we assessed children and adolescents younger than 18 years with a clinical or genetic diagnosis of HeFH at the time of entry into the Familial Hypercholesterolaemia Studies Collaboration (FHSC) registry between Oct 1, 2015, and Jan 31, 2021. Data in the registry were collected from 55 regional or national registries in 48 countries. Diagnoses relying on self-reported history of familial hypercholesterolaemia and suspected secondary hypercholesterolaemia were excluded from the registry; people with untreated LDL cholesterol (LDL-C) of at least 13·0 mmol/L were excluded from this study. Data were assessed overall and by WHO region, World Bank country income status, age, diagnostic criteria, and index-case status. The main outcome of this study was to assess current identification and management of children and adolescents with familial hypercholesterolaemia. Findings: Of 63 093 individuals in the FHSC registry, 11 848 (18·8%) were children or adolescents younger than 18 years with HeFH and were included in this study; 5756 (50·2%) of 11 476 included individuals were female and 5720 (49·8%) were male. Sex data were missing for 372 (3·1%) of 11 848 individuals. Median age at registry entry was 9·6 years (IQR 5·8-13·2). 10 099 (89·9%) of 11 235 included individuals had a final genetically confirmed diagnosis of familial hypercholesterolaemia and 1136 (10·1%) had a clinical diagnosis. Genetically confirmed diagnosis data or clinical diagnosis data were missing for 613 (5·2%) of 11 848 individuals. Genetic diagnosis was more common in children and adolescents from high-income countries (9427 [92·4%] of 10 202) than in children and adolescents from non-high-income countries (199 [48·0%] of 415). 3414 (31·6%) of 10 804 children or adolescents were index cases. Familial-hypercholesterolaemia-related physical signs, cardiovascular risk factors, and cardiovascular disease were uncommon, but were more common in non-high-income countries. 7557 (72·4%) of 10 428 included children or adolescents were not taking lipid-lowering medication (LLM) and had a median LDL-C of 5·00 mmol/L (IQR 4·05-6·08). Compared with genetic diagnosis, the use of unadapted clinical criteria intended for use in adults and reliant on more extreme phenotypes could result in 50-75% of children and adolescents with familial hypercholesterolaemia not being identified. Interpretation: Clinical characteristics observed in adults with familial hypercholesterolaemia are uncommon in children and adolescents with familial hypercholesterolaemia, hence detection in this age group relies on measurement of LDL-C and genetic confirmation. Where genetic testing is unavailable, increased availability and use of LDL-C measurements in the first few years of life could help reduce the current gap between prevalence and detection, enabling increased use of combination LLM to reach recommended LDL-C targets early in life

Mortality and pulmonary complications in patients undergoing surgery with perioperative SARS-CoV-2 infection: an international cohort study

Background: The impact of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) on postoperative recovery needs to be understood to inform clinical decision making during and after the COVID-19 pandemic. This study reports 30-day mortality and pulmonary complication rates in patients with perioperative SARS-CoV-2 infection. Methods: This international, multicentre, cohort study at 235 hospitals in 24 countries included all patients undergoing surgery who had SARS-CoV-2 infection confirmed within 7 days before or 30 days after surgery. The primary outcome measure was 30-day postoperative mortality and was assessed in all enrolled patients. The main secondary outcome measure was pulmonary complications, defined as pneumonia, acute respiratory distress syndrome, or unexpected postoperative ventilation. Findings: This analysis includes 1128 patients who had surgery between Jan 1 and March 31, 2020, of whom 835 (74·0%) had emergency surgery and 280 (24·8%) had elective surgery. SARS-CoV-2 infection was confirmed preoperatively in 294 (26·1%) patients. 30-day mortality was 23·8% (268 of 1128). Pulmonary complications occurred in 577 (51·2%) of 1128 patients; 30-day mortality in these patients was 38·0% (219 of 577), accounting for 81·7% (219 of 268) of all deaths. In adjusted analyses, 30-day mortality was associated with male sex (odds ratio 1·75 [95% CI 1·28–2·40], p\textless0·0001), age 70 years or older versus younger than 70 years (2·30 [1·65–3·22], p\textless0·0001), American Society of Anesthesiologists grades 3–5 versus grades 1–2 (2·35 [1·57–3·53], p\textless0·0001), malignant versus benign or obstetric diagnosis (1·55 [1·01–2·39], p=0·046), emergency versus elective surgery (1·67 [1·06–2·63], p=0·026), and major versus minor surgery (1·52 [1·01–2·31], p=0·047). Interpretation: Postoperative pulmonary complications occur in half of patients with perioperative SARS-CoV-2 infection and are associated with high mortality. Thresholds for surgery during the COVID-19 pandemic should be higher than during normal practice, particularly in men aged 70 years and older. Consideration should be given for postponing non-urgent procedures and promoting non-operative treatment to delay or avoid the need for surgery. Funding: National Institute for Health Research (NIHR), Association of Coloproctology of Great Britain and Ireland, Bowel and Cancer Research, Bowel Disease Research Foundation, Association of Upper Gastrointestinal Surgeons, British Association of Surgical Oncology, British Gynaecological Cancer Society, European Society of Coloproctology, NIHR Academy, Sarcoma UK, Vascular Society for Great Britain and Ireland, and Yorkshire Cancer Research

First virtual endocasts of a fossil rodent: <i>Ischyromys typus</i> (Ischyromyidae, Oligocene) and brain evolution in rodents

<p>The evolution of the brain in rodents has rarely been studied from the perspective of the fossil record. Here we describe the first virtual endocast of a fossil rodent, pertaining to <i>Ischyromys typus</i> (ROMV 1007; Orellan North American Land Mammal Age [NALMA], Nebraska), and form comparisons with partial and complete natural endocasts pertaining to the same genus, and with the virtual endocast of a closely related extant rodent (<i>Sciurus carolinensis</i>; AMNH 258346). These data allow us to formulate the first hypotheses informed by the fossil record concerning changes in brain size and shape through time in rodents, and to make comparisons with other euarchontoglirans, including Primates. <i>Ischyromys</i> exhibits several aspects of brain morphology that can be inferred to be primitive, in part based on their presence in plesiadapiform primates (e.g., exposed midbrain), although variation exists within the genus <i>Ischyromys</i> with respect to the visibility of the inferior colliculi. There is some evidence that neocorticalization occurred in rodents through time but to a lesser degree than in Primates. Arboreality might be linked to increases in the encephalization quotient and specializations related to vision in rodents, which contrasts with the situation in Primates. Finally, Oligocene rodents had smaller olfactory bulbs compared with plesiadapiform primates from the Eocene, meaning that olfaction might have been less critical in the early evolution of rodents. These results show that the evolution of the brain in mammals does not always follow the same evolutionary trajectories and demonstrates the importance of considering ecological factors when looking at brain size.</p> <p>SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at <a href="http://www.tandfonline.com/UJVP" target="_blank">www.tandfonline.com/UJVP</a></p> <p>Citation for this article: Bertrand, O. C., and M. T. Silcox. 2016. First virtual endocasts of a fossil rodent: <i>Ischyromys typus</i> (Ischyromyidae, Oligocene) and brain evolution in rodents. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2016.1096275.</p

Data from: Virtual endocasts of fossil Sciuroidea: brain size reduction in the evolution of fossoriality

Aplodontia rufa (Mountain Beaver) is the only extant member of Aplodontidae. The fossil record indicates that this family displayed greater taxonomic and ecological diversity in the past, and that the burrowing adaptations of Aplodontia might be derived. We describe the first virtual endocasts of A. rufa and of three fossil aplodontids: Prosciurus relictus and Pros. aff. saskatchewaensis (Early Oligocene), and Mesogaulus paniensis (late Miocene). Our results show that the endocasts of early aplodontid rodents are more similar to those of early arboreal squirrels than to the later occurring aplodontids in terms of both relative size and morphology. The endocranial features observed in sciurids and early aplodontids, missing in later aplodontids, have been associated with better vision and the development of arboreality in squirrels. Basal Aplodontidae known from postcrania have been described as generalists with some features for arboreality, which may provide a basis for these similarities. In contrast, the relatively small endocasts of the later occurring aplodontids, which lack traits related to visual specialization, may reflect their burrowing adaptations, as they would be less reliant on visual cues. When integrated with data from the most primitive fossil rodents, the Ischyromyidae, these new data suggest early squirrels and aplodontids diverged from more terrestrial ischyromyids to become more arboreal, with relatively larger brains showing traits for improved vision. Recent Aplodontidae with fossorial adaptations returned to a more ischyromyid-like condition in their endocranial features. These results are consistent with previous observations that changes in locomotion are reflected in the endocranial anatomy of rodents

Cranial dimensions as estimators of body mass and locomotor habits in extant and fossil rodents

<p>Estimating body mass and locomotor habits of fossil rodents is challenging for taxa without available postcranial material. Although equations exist to estimate body mass from dental dimensions based on extant rodents, the applicability of such equations is doubtful given that modern rodents have evolved highly specialized teeth, whereas fossil taxa often exhibit a much less derived condition. For the present study, 11 cranial variables from a sample of 203 extant rodents of known body mass representing a range of taxonomic groups were assessed using reduced major axis (RMA) regression. The results show a strong correlation between body mass and each of the 11 cranial variables. The best estimators for body mass are skull length and cheek-tooth area, whereas the least reliable measures are palate length, and foramen magnum, as well as braincase and occipital condyle dimensions. We estimated body mass for specimens of five fossil Ischyromyidae rodents for which body mass had never been estimated (<i>Paramys copei, P. delicatus, Reithroparamys delicatissimus, Rapamys atramontis</i>, and <i>Ischyromys typus</i>). Principal components and canonical variates analyses based on 10 cranial dimensions for 103 members of Sciuromorpha demonstrate that a relationship exists between locomotor habits and cranial variables in this suborder. In these analyses, early ischyromyids are all placed in the terrestrial group with <i>Aplodontia, Marmota, Cynomys</i>, and <i>Spermophilus</i>. This contradicts previous hypotheses regarding early rodent locomotion, which suggested that they were arboreal or more generalized in their habits.</p> <p>SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP</p> <p>Citation for this article: Bertrand, O. C., M. A. Schillaci, and M. T. Silcox. 2015. Cranial dimensions as estimators of body mass and locomotor habits in extant and fossil rodents. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2015.1014905.</p

Locomotor behavior and hearing sensitivity in an early lagomorph reconstructed from the bony labyrinth

The structure of the bony labyrinth is highly informative with respect to locomotor agility (semicircular canals [SCC]) and hearing sensitivity (cochlear and oval windows). Here, we reconstructed the agility and hearing sensitivity of the stem lagomorph Megalagus turgidus from the early Oligocene of the Brule Formation of Nebraska (USA). Megalagus has proportionally smaller SCCs with respect to its body mass compared with most extant leporids but within the modern range of variability, suggesting that it was less agile than most of its modern relatives. A level of agility for Megalagus within the range of modern rabbits is consistent with the evidence from postcranial elements. The hearing sensitivity for Megalagus is in the range of extant lagomorphs for both low- and high-frequency sounds. Our data show that by the early Oligocene stem lagomorphs had already attained fundamentally rabbit-like hearing sensitivity and locomotor behavior, even though Megalagus was not a particularly agile lagomorph. This is likely because Megalagus was more of a woodland dweller than an open-habitat runner. The study of sensory evolution in Lagomorpha is practically unknown, and these results provide first advances in understanding the primitive stages for the order and how the earliest members of this clade perceived their environment