Linajes de Trypanosoma cruzi en pacientes con enfermedad de Chagas y coinfección por VIH

Introducción. Las poblaciones naturales de T. cruzi han sido clasificadas en seis linajes filogenéticos o unidades de tipificación discreta: T. cruzi I, IIa, IIb, IIc, IId y IIe, que pueden jugar un rol en el tropismo tisular y patogénesis de la enfermedad de Chagas. El impacto de la infección por VIH en la diversidad genética de T. cruzi en pacientes coinfectados es un campo poco explorado en parasitología. Objetivo. Caracterizar linajes de poblaciones parasitarias naturales en muestras clínicas de pacientes coinfectados por T. cruzi y VIH. Materiales y Métodos. Se analizaron muestras de sangre y/o lesiones de 25 pacientes residentes en Argentina: 8 pediátricos nacidos de 7 madres coinfectadas, 3 adultos con Chagas indeterminado y VIH y 7 con encefalitis chagásica por SIDA. El diagnóstico molecular y seguimiento de tratamiento etiológico se realizó por PCR hacia secuencias del minicírculo y/o satélite. Los linajes de T. cruzi fueron identificados por PCR para fragmentos de genes para miniexón y ARN ribosomal 24s. La diversidad infra-linaje fue caracterizada por polimorfismo de fragmentos de restricción de las regiones variables del minicírculo. Resultados. De las 7 madres coinfectadas, 2 transmitieron tanto VIH como T. cruzi a sus hijos y 4 sólo transmitieron T. cruzi. El otro caso fue una mujer embarazada que al entrar en coma por presentar un cuadro de Chagas cerebral fue tratada con Benznidazol y no transmitió ni Chagas ni VIH a su hija. En los casos tratados se observó la negativización de la PCR. La mayoría de las poblaciones parasitarias sanguíneas fueron T. cruzi IId, con perfiles de minicírculos particulares de cada paciente, excepto en pares madre-niño infectados, en que resultaron idénticas. Se hallaron poblaciones mixtas con T. cruzi I-IId. En pacientes con reactivación chagásica se encontró tropismo diferencial de T. cruzi IIb y T. cruzi I en lesiones. En estos pacientes los perfiles de minicírculos mostraron patrones complejos sugiriendo poblaciones policlonales. Conclusiones. La elevada proporción de muestras PCR positivas es indicativa de cargas parasitarias más elevadas que en población chagásica sin VIH. Esta exacerbación estaría también implicada en la alta tasa de transmisión vertical. La prevalencia de linaje IId en sangre periférica concuerda con lo hallado en población chagásica en la región. La asociación de linajes infrecuentes en lesiones asociadas a encefalitis chagásica sugiere tropismo diferencial. El análisis directo de linajes parasitarios en muestras clínicas permitió detectar una mayor prevalencia de infecciones mixtas que la detectada a partir de aislamientos en cultivo.Background. Natural populations of T. cruzi have been classified into six phylogenetic lineages or discrete typing units, T. cruzi I, IIa, IIb, IIc, IId, and IIe, believed to play a role in tissue tropism and disease pathogenesis. The impact of HIV infection in the T. cruzi genetic diversity in coinfected patients is a scarcely explored field of parasitology. Objective. To characterize parasitic lineages in clinical samples from patients co-infected with T. cruzi and HIV Materials and Methods. We analyzed blood and lesions samples from 25 patients residing in Argentina, namely 8 infants born to 7 HIV - T. cruzi co-infected mothers, 3 indeterminate adult chagasic patients with HIV co-infection and 7 presenting cerebral Chagas due to AIDS. Molecular diagnosis and monitoring of etiological treatment was carried out by PCR targeted to kinetoplastid (kDNA) and/or satellite sequences. T. cruzi lineages were identified by means of PCR targeted to the intergenic spacer of miniexon gene and 24s ribosomal ARN genes. To characterize the infra-lineage diversity, restriction fragment length polymorphism (RFLP) of KDNA amplicons was carried out. Results. Out of the 7 co-infected mothers, two transmitted both HIV and T. cruzi to their siblings, four transmitted only T. cruzi. The remaining case was a pregnant woman with cerebral Chagas disease who entered into a coma being treated with benznidazole; she did not transmit congenital Chagas disease nor HIV to her newborn. Most bloodstream populations belonged to T. cruzi IId, with unique minicircle signatures for each patient´s strain, but identical signatures between strains from mothers and their congenitally infected infants. Mixtures of lineages T. cruzi I and T. cruzi IId were also detected. Differential tissue tropism of T. cruzi IIb and T. cruzi I was found in patients with cerebral chagas. Minicircle signatures showed complex patterns suggestive of polyclonal populations. Conclusions. The higher proportion of PCR positive samples suggests higher parasite loads that in chagasic population without HIV. The higher prevalence of T. cruzi IId in bloodstream is in agreement with previous findings in this region. The association of rare lineages at sites of encephalytis suggests differential tropism. The direct characterization of parasite lineages in clinical samples allowed identification of a higher prevalence of mixed infections, than previously assumed, from studies based on culture isolates.Fil: Bisio, Margarita María Catalina. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; ArgentinaFil: Cura, Carolina Inés. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; ArgentinaFil: Duffy, Tomás. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; ArgentinaFil: Altcheh, Jaime Marcelo. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Gobierno de la Ciudad de Buenos Aires. Hospital General de Niños "Ricardo Gutiérrez"; ArgentinaFil: Giganti, Salvador Óscar. Servicios de Neurocirugía y Clínica Médica; ArgentinaFil: Begher, Sandra. Gobierno de la Ciudad de Buenos Aires. Hospital de Agudos "Ignacio Pirovano"; ArgentinaFil: Scapellato, Pablo Gustavo. Gobierno de la Ciudad de Buenos Aires. Hospital de Agudos "D. F. Santojanni"; ArgentinaFil: Burgos, Juan Miguel. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; ArgentinaFil: Levin, Mariano Jorge. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; ArgentinaFil: Schreck, Ricardo. Servicios de Neurocirugía y Clínica Médica; ArgentinaFil: Freilij, Hector León. Gobierno de la Ciudad de Buenos Aires. Hospital General de Niños "Ricardo Gutiérrez"; ArgentinaFil: Schijman, Alejandro Gabriel. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; Argentin

The state of the Martian climate

60°N was +2.0°C, relative to the 1981–2010 average value (Fig. 5.1). This marks a new high for the record. The average annual surface air temperature (SAT) anomaly for 2016 for land stations north of starting in 1900, and is a significant increase over the previous highest value of +1.2°C, which was observed in 2007, 2011, and 2015. Average global annual temperatures also showed record values in 2015 and 2016. Currently, the Arctic is warming at more than twice the rate of lower latitudes

DETC Induces Leishmania Parasite Killing in Human In Vitro and Murine In Vivo Models: A Promising Therapeutic Alternative in Leishmaniasis

Background: Chemotherapy remains the primary tool for treatment and control of human leishmaniasis. However, currently available drugs present serious problems regarding side-effects, variable efficacy, and cost. Affordable and less toxic drugs are urgently needed for leishmaniasis. Methodology/Principal Findings: We demonstrate, by microscopy and viability assays, that superoxide dismutase inhibitor diethyldithiocarbamate (DETC) dose-dependently induces parasite killing (p,0.001) and is able to ??????sterilize?????? Leishmania amazonensis infection at 2 mM in human macrophages in vitro. We also show that DETC-induced superoxide production (p,0.001) and parasite destruction (p,0.05) were reverted by the addition of the antioxidant N-acetylcysteine, indicating that DETC-induced killing occurs through oxidative damage. Furthermore, ultrastructural analysis by electron microscopy demonstrates a rapid and highly selective destruction of amastigotes in the phagosome upon DETC treatment, without any apparent damage to the host cell, including its mitochondria. In addition, DETC significantly induced parasite killing in Leishmania promastigotes in axenic culture. In murine macrophages infected with Leishmania braziliensis, DETC significantly induced in vitro superoxide production (p = 0.0049) and parasite killing (p = 0.0043). In vivo treatment with DETC in BALB/C mice infected with Leishmania braziliensis caused a significant decrease in lesion size (p,0.0001), paralleled by a 100-fold decrease (p = 0.0087) in parasite burden. Conclusions/Significance: Due to its strong leishmanicidal effect in human macrophages in vitro, its in vivo effectiveness in a murine model, and its previously demonstrated in vivo safety profile in HIV treatment, DETC treatment might be considered as a valuable therapeutic option in human leishmaniasis, including HIV/Leishmania co-infection

State of the climate in 2018

In 2018, the dominant greenhouse gases released into Earth’s atmosphere—carbon dioxide, methane, and nitrous oxide—continued their increase. The annual global average carbon dioxide concentration at Earth’s surface was 407.4 ± 0.1 ppm, the highest in the modern instrumental record and in ice core records dating back 800 000 years. Combined, greenhouse gases and several halogenated gases contribute just over 3 W m−2 to radiative forcing and represent a nearly 43% increase since 1990. Carbon dioxide is responsible for about 65% of this radiative forcing. With a weak La Niña in early 2018 transitioning to a weak El Niño by the year’s end, the global surface (land and ocean) temperature was the fourth highest on record, with only 2015 through 2017 being warmer. Several European countries reported record high annual temperatures. There were also more high, and fewer low, temperature extremes than in nearly all of the 68-year extremes record. Madagascar recorded a record daily temperature of 40.5°C in Morondava in March, while South Korea set its record high of 41.0°C in August in Hongcheon. Nawabshah, Pakistan, recorded its highest temperature of 50.2°C, which may be a new daily world record for April. Globally, the annual lower troposphere temperature was third to seventh highest, depending on the dataset analyzed. The lower stratospheric temperature was approximately fifth lowest. The 2018 Arctic land surface temperature was 1.2°C above the 1981–2010 average, tying for third highest in the 118-year record, following 2016 and 2017. June’s Arctic snow cover extent was almost half of what it was 35 years ago. Across Greenland, however, regional summer temperatures were generally below or near average. Additionally, a satellite survey of 47 glaciers in Greenland indicated a net increase in area for the first time since records began in 1999. Increasing permafrost temperatures were reported at most observation sites in the Arctic, with the overall increase of 0.1°–0.2°C between 2017 and 2018 being comparable to the highest rate of warming ever observed in the region. On 17 March, Arctic sea ice extent marked the second smallest annual maximum in the 38-year record, larger than only 2017. The minimum extent in 2018 was reached on 19 September and again on 23 September, tying 2008 and 2010 for the sixth lowest extent on record. The 23 September date tied 1997 as the latest sea ice minimum date on record. First-year ice now dominates the ice cover, comprising 77% of the March 2018 ice pack compared to 55% during the 1980s. Because thinner, younger ice is more vulnerable to melting out in summer, this shift in sea ice age has contributed to the decreasing trend in minimum ice extent. Regionally, Bering Sea ice extent was at record lows for almost the entire 2017/18 ice season. For the Antarctic continent as a whole, 2018 was warmer than average. On the highest points of the Antarctic Plateau, the automatic weather station Relay (74°S) broke or tied six monthly temperature records throughout the year, with August breaking its record by nearly 8°C. However, cool conditions in the western Bellingshausen Sea and Amundsen Sea sector contributed to a low melt season overall for 2017/18. High SSTs contributed to low summer sea ice extent in the Ross and Weddell Seas in 2018, underpinning the second lowest Antarctic summer minimum sea ice extent on record. Despite conducive conditions for its formation, the ozone hole at its maximum extent in September was near the 2000–18 mean, likely due to an ongoing slow decline in stratospheric chlorine monoxide concentration. Across the oceans, globally averaged SST decreased slightly since the record El Niño year of 2016 but was still far above the climatological mean. On average, SST is increasing at a rate of 0.10° ± 0.01°C decade−1 since 1950. The warming appeared largest in the tropical Indian Ocean and smallest in the North Pacific. The deeper ocean continues to warm year after year. For the seventh consecutive year, global annual mean sea level became the highest in the 26-year record, rising to 81 mm above the 1993 average. As anticipated in a warming climate, the hydrological cycle over the ocean is accelerating: dry regions are becoming drier and wet regions rainier. Closer to the equator, 95 named tropical storms were observed during 2018, well above the 1981–2010 average of 82. Eleven tropical cyclones reached Saffir–Simpson scale Category 5 intensity. North Atlantic Major Hurricane Michael’s landfall intensity of 140 kt was the fourth strongest for any continental U.S. hurricane landfall in the 168-year record. Michael caused more than 30 fatalities and $25 billion (U.S. dollars) in damages. In the western North Pacific, Super Typhoon Mangkhut led to 160 fatalities and$6 billion (U.S. dollars) in damages across the Philippines, Hong Kong, Macau, mainland China, Guam, and the Northern Mariana Islands. Tropical Storm Son-Tinh was responsible for 170 fatalities in Vietnam and Laos. Nearly all the islands of Micronesia experienced at least moderate impacts from various tropical cyclones. Across land, many areas around the globe received copious precipitation, notable at different time scales. Rodrigues and Réunion Island near southern Africa each reported their third wettest year on record. In Hawaii, 1262 mm precipitation at Waipā Gardens (Kauai) on 14–15 April set a new U.S. record for 24-h precipitation. In Brazil, the city of Belo Horizonte received nearly 75 mm of rain in just 20 minutes, nearly half its monthly average. Globally, fire activity during 2018 was the lowest since the start of the record in 1997, with a combined burned area of about 500 million hectares. This reinforced the long-term downward trend in fire emissions driven by changes in land use in frequently burning savannas. However, wildfires burned 3.5 million hectares across the United States, well above the 2000–10 average of 2.7 million hectares. Combined, U.S. wildfire damages for the 2017 and 2018 wildfire seasons exceeded $40 billion (U.S. dollars)

Characterization of esterase activity from an Acetomicrobium hydrogeniformans enzyme with high structural stability in extreme conditions

The biotechnological and industrial uses of thermostable and organic solvent-tolerant enzymes are extensive and the investigation of such enzymes from microbiota present in oil reservoirs is a promising approach. Searching sequence databases for esterases from such microbiota, we have identified in silico a potentially secreted esterase from Acetomicrobium hydrogeniformans, named AhEst. The recombinant enzyme was produced in E. coli to be used in biochemical and biophysical characterization studies. AhEst presented hydrolytic activity on short-acyl-chain p-nitrophenyl ester substrates. AhEst activity was high and stable in temperatures up to 75 °C. Interestingly, high salt concentration induced a significant increase of catalytic activity. AhEst still retained ~ 50% of its activity in 30% concentration of several organic solvents. Synchrotron radiation circular dichroism and fluorescence spectroscopies confirmed that AhEst displays high structural stability in extreme conditions of temperature, salinity, and organic solvents. The enzyme is a good emulsifier agent and is able to partially reverse the wettability of an oil-wet carbonate substrate, making it of potential interest for use in enhanced oil recovery. All the traits observed in AhEst make it an interesting candidate for many industrial applications, such as those in which a significant hydrolytic activity at high temperatures is required

Oregon\u27s Fish and Wildlife in a Changing Climate

Chapter 7 in: The Oregon Climate Change Assessment Report Oregon\u27s fish and wildlife include animals on land, fish and other species in rivers and lakes, and various kinds of sea life in estuaries and coastal ocean. Oregon is one of the most ecologically diverse states in the country. The state’s robust biodiversity, some of which is already threatened or endangered -- inhabits complex and dynamic ecosystems that we have only begun to understand, let alone examine in terms of climate change.It is clear that the abundance and distribution of species are shifting already and will shift more rapidly as habitats on land, in freshwater, and in the sea are altered due to increasing temperatures and related environmental changes. It remains to be seen if past changes are all tied to global climate change or if they are a result of some other variability, but they represent a proxy for how species may shift in a warmer climate. Among the observed species changes: Insects are moving in from the south of Oregon, frogs are reproducing earlier in the year and land birds are shifting their distributions northward and migrating earlier. Freshwater fish are losing their cool-water habitats. In the marine environment, algal blooms have increased (figure 11) and the highly predatory Humboldt squid have shifted their distribution from subtropical and tropical regions, making an appearance off the coast of Oregon in the last few years. In a warmer climate, plant and animal species may have to shift upward or northward on land or deeper at sea for survival. Rare or endangered species may become less abundant or extinct; insect pests, invasive species and harmful algal blooms may become more abundant. Declines in the abundance of species may be caused directly by physiological stress related to changes in temperature, water availability, and other environmental shifts, and/or indirectly by habitat degradation and negative interactions with species that are benefited by climate change (diseases, parasites, predators, and competitors). Understanding the responses of Oregon’s fish and wildlife to climate change will require a better understanding of smaller organisms and insects and ocean species. Knowledge of ecological interactions will be crucial for understanding the related effects of climate change (increased predation or competition, for example). Management and natural resource polices that protect intact ecosystems are a tool for adaptation; native species can live and migrate to these safe refugia

Trypanosoma cruzi discrete typing units in Chagas disease patients with HIV co-infection

Background. Natural populations of T. cruzi have been classified into six phylogenetic lineages or discrete typing units, T. cruzi I, IIa, IIb, IIc, IId, and IIe, believed to play a role in tissue tropism and disease pathogenesis. The impact of HIV infection in the T. cruzi genetic diversity in coinfected patients is a scarcely explored field of parasitology. Objective. To characterize parasitic lineages in clinical samples from patients co-infected with T. cruzi and HIV Materials and Methods. We analyzed blood and lesions samples from 25 patients residing in Argentina, namely 8 infants born to 7 HIV - T. cruzi co-infected mothers, 3 indeterminate adult chagasic patients with HIV co-infection and 7 presenting cerebral Chagas due to AIDS. Molecular diagnosis and monitoring of etiological treatment was carried out by PCR targeted to kinetoplastid (kDNA) and/or satellite sequences. T. cruzi lineages were identified by means of PCR targeted to the intergenic spacer of miniexon gene and 24s ribosomal ARN genes. To characterize the infra-lineage diversity, restriction fragment length polymorphism (RFLP) of KDNA amplicons was carried out. Results. Out of the 7 co-infected mothers, two transmitted both HIV and T. cruzi to their siblings, four transmitted only T. cruzi. The remaining case was a pregnant woman with cerebral Chagas disease who entered into a coma being treated with benznidazole; she did not transmit congenital Chagas disease nor HIV to her newborn. Most bloodstream populations belonged to T. cruzi IId, with unique minicircle signatures for each patient´s strain, but identical signatures between strains from mothers and their congenitally infected infants. Mixtures of lineages T. cruzi I and T. cruzi IId were also detected. Differential tissue tropism of T. cruzi IIb and T. cruzi I was found in patients with cerebral chagas. Minicircle signatures showed complex patterns suggestive of polyclonal populations. Conclusions. The higher proportion of PCR positive samples suggests higher parasite loads that in chagasic population without HIV. The higher prevalence of T. cruzi IId in bloodstream is in agreement with previous findings in this region. The association of rare lineages at sites of encephalytis suggests differential tropism. The direct characterization of parasite lineages in clinical samples allowed identification of a higher prevalence of mixed infections, than previously assumed, from studies based on culture isolates.Introducción. Las poblaciones naturales de T. cruzi han sido clasificadas en seis linajes filogenéticos o unidades de tipificación discreta: T. cruzi I, IIa, IIb, IIc, IId y IIe, que pueden jugar un rol en el tropismo tisular y patogénesis de la enfermedad de Chagas. El impacto de la infección por VIH en la diversidad genética de T. cruzi en pacientes coinfectados es un campo poco explorado en parasitología. Objetivo. Caracterizar linajes de poblaciones parasitarias naturales en muestras clínicas de pacientes coinfectados por T. cruzi y VIH. Materiales y Métodos. Se analizaron muestras de sangre y/o lesiones de 25 pacientes residentes en Argentina: 8 pediátricos nacidos de 7 madres coinfectadas, 3 adultos con Chagas indeterminado y VIH y 7 con encefalitis chagásica por SIDA. El diagnóstico molecular y seguimiento de tratamiento etiológico se realizó por PCR hacia secuencias del minicírculo y/o satélite. Los linajes de T. cruzi fueron identificados por PCR para fragmentos de genes para miniexón y ARN ribosomal 24s. La diversidad infra-linaje fue caracterizada por polimorfismo de fragmentos de restricción de las regiones variables del minicírculo. Resultados. De las 7 madres coinfectadas, 2 transmitieron tanto VIH como T. cruzi a sus hijos y 4 sólo transmitieron T. cruzi. El otro caso fue una mujer embarazada que al entrar en coma por presentar un cuadro de Chagas cerebral fue tratada con Benznidazol y no transmitió ni Chagas ni VIH a su hija. En los casos tratados se observó la negativización de la PCR. La mayoría de las poblaciones parasitarias sanguíneas fueron T. cruzi IId, con perfiles de minicírculos particulares de cada paciente, excepto en pares madre-niño infectados, en que resultaron idénticas. Se hallaron poblaciones mixtas con T. cruzi I-IId. En pacientes con reactivación chagásica se encontró tropismo diferencial de T. cruzi IIb y T. cruzi I en lesiones. En estos pacientes los perfiles de minicírculos mostraron patrones complejos sugiriendo poblaciones policlonales. Conclusiones. La elevada proporción de muestras PCR positivas es indicativa de cargas parasitarias más elevadas que en población chagásica sin VIH. Esta exacerbación estaría también implicada en la alta tasa de transmisión vertical. La prevalencia de linaje IId en sangre periférica concuerda con lo hallado en población chagásica en la región. La asociación de linajes infrecuentes en lesiones asociadas a encefalitis chagásica sugiere tropismo diferencial. El análisis directo de linajes parasitarios en muestras clínicas permitió detectar una mayor prevalencia de infecciones mixtas que la detectada a partir de aislamientos en cultivo