3,161 research outputs found
Examining the contributions of automatic speech transcriptions and metadata sources for searching spontaneous conversational speech
The searching spontaneous speech can be enhanced by combining automatic speech transcriptions with semantically
related metadata. An important question is what can be expected from search of such transcriptions and different
sources of related metadata in terms of retrieval effectiveness. The Cross-Language Speech Retrieval (CL-SR) track at recent CLEF workshops provides a spontaneous speech
test collection with manual and automatically derived metadata fields. Using this collection we investigate the comparative search effectiveness of individual fields comprising automated transcriptions and the available metadata. A further important question is how transcriptions and metadata should be combined for the greatest benefit to search accuracy. We compare simple field merging of individual fields with the extended BM25 model for weighted field combination (BM25F). Results indicate that BM25F can produce improved search accuracy, but that it is currently important to set its parameters suitably using a suitable training set
Modeling the IPv6 Internet AS-level Topology
To measure the IPv6 internet AS-level topology, a network topology discovery
system, called Dolphin, was developed. By comparing the measurement result of
Dolphin with that of CAIDA's Scamper, it was found that the IPv6 Internet at AS
level, similar to other complex networks, is also scale-free but the exponent
of its degree distribution is 1.2, which is much smaller than that of the IPv4
Internet and most other scale-free networks. In order to explain this feature
of IPv6 Internet we argue that the degree exponent is a measure of uniformity
of the degree distribution. Then, for the purpose on modeling the networks, we
propose a new model based on the two major factors affecting the exponent of
the EBA model. It breaks the lower bound of degree exponent which is 2 for most
models. To verify the validity of this model, both theoretical and experimental
analyses have been carried out. Finally, we demonstrate how this model can be
successfully used to reproduce the topology of the IPv6 Internet.Comment: 15 pages, 5 figure
Bridgeness: A Local Index on Edge Significance in Maintaining Global Connectivity
Edges in a network can be divided into two kinds according to their different
roles: some enhance the locality like the ones inside a cluster while others
contribute to the global connectivity like the ones connecting two clusters. A
recent study by Onnela et al uncovered the weak ties effects in mobile
communication. In this article, we provide complementary results on document
networks, that is, the edges connecting less similar nodes in content are more
significant in maintaining the global connectivity. We propose an index named
bridgeness to quantify the edge significance in maintaining connectivity, which
only depends on local information of network topology. We compare the
bridgeness with content similarity and some other structural indices according
to an edge percolation process. Experimental results on document networks show
that the bridgeness outperforms content similarity in characterizing the edge
significance. Furthermore, extensive numerical results on disparate networks
indicate that the bridgeness is also better than some well-known indices on
edge significance, including the Jaccard coefficient, degree product and
betweenness centrality.Comment: 10 pages, 4 figures, 1 tabl
A 19-SNP coronary heart disease gene score profile in subjects with type 2 diabetes: the coronary heart disease risk in type 2 diabetes (CoRDia study) study baseline characteristics
Background: The coronary risk in diabetes (CoRDia) trial (n = 211) compares the effectiveness of usual diabetes care with a self-management intervention (SMI), with and without personalised risk information (including genetics), on clinical and behavioural outcomes. Here we present an assessment of randomisation, the cardiac risk genotyping assay, and the genetic characteristics of the recruits. / Methods: Ten-year coronary heart disease (CHD) risk was calculated using the UKPDS score. Genetic CHD risk was determined by genotyping 19 single nucleotide polymorphisms (SNPs) using Randox’s Cardiac Risk Prediction Array and calculating a gene score (GS). Accuracy of the array was assessed by genotyping a subset of pre-genotyped samples (n = 185). / Results: Overall, 10-year CHD risk ranged from 2–72 % but did not differ between the randomisation groups (p = 0.13). The array results were 99.8 % concordant with the pre-determined genotypes. The GS did not differ between the Caucasian participants in the CoRDia SMI plus risk group (n = 66) (p = 0.80) and a sample of UK healthy men (n = 1360). The GS was also associated with LDL-cholesterol (p = 0.05) and family history (p = 0.03) in a sample of UK healthy men (n = 1360). / Conclusions: CHD risk is high in this group of T2D subjects. The risk array is an accurate genotyping assay, and is suitable for estimating an individual’s genetic CHD risk. / Trial registration: This study has been registered at ClinicalTrials.gov; registration identifier NCT0189178
Recommender Systems
The ongoing rapid expansion of the Internet greatly increases the necessity
of effective recommender systems for filtering the abundant information.
Extensive research for recommender systems is conducted by a broad range of
communities including social and computer scientists, physicists, and
interdisciplinary researchers. Despite substantial theoretical and practical
achievements, unification and comparison of different approaches are lacking,
which impedes further advances. In this article, we review recent developments
in recommender systems and discuss the major challenges. We compare and
evaluate available algorithms and examine their roles in the future
developments. In addition to algorithms, physical aspects are described to
illustrate macroscopic behavior of recommender systems. Potential impacts and
future directions are discussed. We emphasize that recommendation has a great
scientific depth and combines diverse research fields which makes it of
interests for physicists as well as interdisciplinary researchers.Comment: 97 pages, 20 figures (To appear in Physics Reports
Targeting tumour re-wiring by triple blockade of mTORC1, epidermal growth factor, and oestrogen receptor signalling pathways in endocrine-resistant breast cancer
Background
Endocrine therapies are the mainstay of treatment for oestrogen receptor (ER)-positive (ER+) breast cancer (BC). However, resistance remains problematic largely due to enhanced cross-talk between ER and growth factor pathways, circumventing the need for steroid hormones. Previously, we reported the anti-proliferative effect of everolimus (RAD001-mTORC1 inhibitor) with endocrine therapy in resistance models; however, potential routes of escape from treatment via ERBB2/3 signalling were observed. We hypothesised that combined targeting of three cellular nodes (ER, ERBB, and mTORC1) may provide enhanced long-term clinical utility.
Methods
A panel of ER+ BC cell lines adapted to long-term oestrogen deprivation (LTED) and expressing ESR1wt or ESR1Y537S, modelling acquired resistance to an aromatase-inhibitor (AI), were treated in vitro with a combination of RAD001 and neratinib (pan-ERBB inhibitor) in the presence or absence of oestradiol (E2), tamoxifen (4-OHT), or fulvestrant (ICI182780). End points included proliferation, cell signalling, cell cycle, and effect on ER-mediated transactivation. An in-vivo model of AI resistance was treated with monotherapies and combinations to assess the efficacy in delaying tumour progression. RNA-seq analysis was performed to identify changes in global gene expression as a result of the indicated therapies.
Results
Here, we show RAD001 and neratinib (pan-ERBB inhibitor) caused a concentration-dependent decrease in proliferation, irrespective of the ESR1 mutation status. The combination of either agent with endocrine therapy further reduced proliferation but the maximum effect was observed with a triple combination of RAD001, neratinib, and endocrine therapy. In the absence of oestrogen, RAD001 caused a reduction in ER-mediated transcription in the majority of the cell lines, which associated with a decrease in recruitment of ER to an oestrogen-response element on the TFF1 promoter. Contrastingly, neratinib increased both ER-mediated transactivation and ER recruitment, an effect reduced by the addition of RAD001. In-vivo analysis of an LTED model showed the triple combination of RAD001, neratinib, and fulvestrant was most effective at reducing tumour volume. Gene set enrichment analysis revealed that the addition of neratinib negated the epidermal growth factor (EGF)/EGF receptor feedback loops associated with RAD001.
Conclusions
Our data support the combination of therapies targeting ERBB2/3 and mTORC1 signalling, together with fulvestrant, in patients who relapse on endocrine therapy and retain a functional ER
Emergence of scale-free close-knit friendship structure in online social networks
Despite the structural properties of online social networks have attracted
much attention, the properties of the close-knit friendship structures remain
an important question. Here, we mainly focus on how these mesoscale structures
are affected by the local and global structural properties. Analyzing the data
of four large-scale online social networks reveals several common structural
properties. It is found that not only the local structures given by the
indegree, outdegree, and reciprocal degree distributions follow a similar
scaling behavior, the mesoscale structures represented by the distributions of
close-knit friendship structures also exhibit a similar scaling law. The degree
correlation is very weak over a wide range of the degrees. We propose a simple
directed network model that captures the observed properties. The model
incorporates two mechanisms: reciprocation and preferential attachment. Through
rate equation analysis of our model, the local-scale and mesoscale structural
properties are derived. In the local-scale, the same scaling behavior of
indegree and outdegree distributions stems from indegree and outdegree of nodes
both growing as the same function of the introduction time, and the reciprocal
degree distribution also shows the same power-law due to the linear
relationship between the reciprocal degree and in/outdegree of nodes. In the
mesoscale, the distributions of four closed triples representing close-knit
friendship structures are found to exhibit identical power-laws, a behavior
attributed to the negligible degree correlations. Intriguingly, all the
power-law exponents of the distributions in the local-scale and mesoscale
depend only on one global parameter -- the mean in/outdegree, while both the
mean in/outdegree and the reciprocity together determine the ratio of the
reciprocal degree of a node to its in/outdegree.Comment: 48 pages, 34 figure
Statistical Inference for Valued-Edge Networks: Generalized Exponential Random Graph Models
Across the sciences, the statistical analysis of networks is central to the
production of knowledge on relational phenomena. Because of their ability to
model the structural generation of networks, exponential random graph models
are a ubiquitous means of analysis. However, they are limited by an inability
to model networks with valued edges. We solve this problem by introducing a
class of generalized exponential random graph models capable of modeling
networks whose edges are valued, thus greatly expanding the scope of networks
applied researchers can subject to statistical analysis
REFERQUAL: A pilot study of a new service quality assessment instrument in the GP Exercise Referral scheme setting
Background
The development of an instrument accurately assessing service quality in the GP Exercise Referral Scheme (ERS) industry could potentially inform scheme organisers of the factors that affect adherence rates leading to the implementation of strategic interventions aimed at reducing client drop-out.
Methods
A modified version of the SERVQUAL instrument was designed for use in the ERS setting and subsequently piloted amongst 27 ERS clients.
Results
Test re-test correlations were calculated via Pearson's 'r' or Spearman's 'rho', depending on whether the variables were Normally Distributed, to show a significant (mean r = 0.957, SD = 0.02, p < 0.05; mean rho = 0.934, SD = 0.03, p < 0.05) relationship between all items within the questionnaire. In addition, satisfactory internal consistency was demonstrated via Cronbach's 'α'. Furthermore, clients responded favourably towards the usability, wording and applicability of the instrument's items.
Conclusion
REFERQUAL is considered to represent promise as a suitable tool for future evaluation of service quality within the ERS community. Future research should further assess the validity and reliability of this instrument through the use of a confirmatory factor analysis to scrutinise the proposed dimensional structure
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