Ten millennia of hepatitis B virus evolution

Hepatitis B virus (HBV) has been infecting humans for millennia and remains a global health problem, but its past diversity and dispersal routes are largely unknown. We generated HBV genomic data from 137 Eurasians and Native Americans dated between ~10,500 and ~400 years ago. We date the most recent common ancestor of all HBV lineages to between ~20,000 and 12,000 years ago, with the virus present in European and South American hunter-gatherers during the early Holocene. After the European Neolithic transition, Mesolithic HBV strains were replaced by a lineage likely disseminated by early farmers that prevailed throughout western Eurasia for ~4000 years, declining around the end of the 2nd millennium BCE. The only remnant of this prehistoric HBV diversity is the rare genotype G, which appears to have reemerged during the HIV pandemic

Topological logics with connectedness over Euclidean spaces

We consider the quantifier-free languages, Bc and Bc°, obtained by augmenting the signature of Boolean algebras with a unary predicate representing, respectively, the property of being connected, and the property of having a connected interior. These languages are interpreted over the regular closed sets of Rn (n ≥ 2) and, additionally, over the regular closed semilinear sets of Rn. The resulting logics are examples of formalisms that have recently been proposed in the Artificial Intelligence literature under the rubric Qualitative Spatial Reasoning. We prove that the satisfiability problem for Bc is undecidable over the regular closed semilinear sets in all dimensions greater than 1, and that the satisfiability problem for Bc and Bc° is undecidable over both the regular closed sets and the regular closed semilinear sets in the Euclidean plane. However, we also prove that the satisfiability problem for Bc° is NP-complete over the regular closed sets in all dimensions greater than 2, while the corresponding problem for the regular closed semilinear sets is ExpTime-complete. Our results show, in particular, that spatial reasoning is much harder over Euclidean spaces than over arbitrary topological spaces

Studying Gamow-Teller transitions and the assignment of isomeric and ground states at N=50

Direct mass measurements of neutron-deficient nuclides around the N = 50 shell closure below 100Sn were performed at the FRS Ion Catcher (FRS-IC) at GSI, Germany. The nuclei were produced by projectile fragmentation of 124Xe, separated in the fragment separator FRS and delivered to the FRS-IC. The masses of 14 ground states and two isomers were measured with relative mass uncertainties down to 1 x 10-7 using the multiple-reflection time-of-flight mass spectrometer of the FRS-IC, including the first direct mass measurements of 98Cd , 97Rh. A new QEC = 5437 +/- 67 keV was obtained for 98Cd, resulting in a summed Gamow-Teller (GT) strength for the five observed transitions (0+ --> 1+) as B(GT) = 2.94+0.32 -0.28. Investigation of this result in state-of-the-art shell model approaches accounting for the first time experimentally observed spectrum of GT transitions points to a perfect agreement for N = 50 isotones. The excitation energy of the long-lived isomeric state in 94Rh was determined for the first time to be 293 +/- 21 keV. This, together with the shell model calculations, allows the level ordering in 94Rh to be understood.(c) 2023 The Author(s). Published by Elsevier B.V. This is an open access article under the CC BY license (http://creativecommons .org /licenses /by /4 .0/). Funded by SCOAP3.Peer reviewe

Studying Gamow-Teller transitions and the assignment of isomeric and ground states at N = 50

Direct mass measurements of neutron-deficient nuclides around the N=50 shell closure below 100Sn were performed at the FRS Ion Catcher (FRS-IC) at GSI, Germany. The nuclei were produced by projectile fragmentation of 124Xe, separated in the fragment separator FRS and delivered to the FRS-IC. The masses of 14 ground states and two isomers were measured with relative mass uncertainties down to 1×10−7 using the multiple-reflection time-of-flight mass spectrometer of the FRS-IC, including the first direct mass measurements of 98Cd and 97Rh. A new QEC=5437±67 keV was obtained for 98Cd, resulting in a summed Gamow-Teller (GT) strength for the five observed transitions (0+⟶1+) as B(GT)=2.94−0.28+0.32. Investigation of this result in state-of-the-art shell model approaches accounting for the first time experimentally observed spectrum of GT transitions points to a perfect agreement for N=50 isotones. The excitation energy of the long-lived isomeric state in 94Rh was determined for the first time to be 293±21 keV. This, together with the shell model calculations, allows the level ordering in 94Rh to be understood

The genomic history of southeastern Europe

Farming was first introduced to Europe in the mid-seventh millennium bc, and was associated with migrants from Anatolia who settled in the southeast before spreading throughout Europe. Here, to understand the dynamics of this process, we analysed genome-wide ancient DNA data from 225 individuals who lived in southeastern Europe and surrounding regions between 12000 and 500 bc. We document a west-east cline of ancestry in indigenous hunter-gatherers and, in eastern Europe, the early stages in the formation of Bronze Age steppe ancestry. We show that the first farmers of northern and western Europe dispersed through southeastern Europe with limited hunter-gatherer admixture, but that some early groups in the southeast mixed extensively with hunter-gatherers without the sex-biased admixture that prevailed later in the north and west. We also show that southeastern Europe continued to be a nexus between east and west after the arrival of farmers, with intermittent genetic contact with steppe populations occurring up to 2,000 years earlier than the migrations from the steppe that ultimately replaced much of the population of northern Europe.Iain Mathieson … Wolfgang Haak … David Reic

Nuclear astrophysics with radioactive ions at FAIR

The nucleosynthesis of elements beyond iron is dominated by neutron captures in the s and r processes. However, 32 stable, proton-rich isotopes cannot be formed during those processes, because they are shielded from the s-process flow and r-process β-decay chains. These nuclei are attributed to the p and rp process. For all those processes, current research in nuclear astrophysics addresses the need for more precise reaction data involving radioactive isotopes. Depending on the particular reaction, direct or inverse kinematics, forward or time-reversed direction are investigated to determine or at least to constrain the desired reaction cross sections. The Facility for Antiproton and Ion Research (FAIR) will offer unique, unprecedented opportunities to investigate many of the important reactions. The high yield of radioactive isotopes, even far away from the valley of stability, allows the investigation of isotopes involved in processes as exotic as the r or rp processes