Observational and model evidence for a prominent stratospheric influence on variability in tropospheric nitrous oxide

The literature presents different views on how the stratosphere influences variability in surface nitrous oxide (N2O) and on whether that influence is outweighed by surface emission changes driven by the El Niño–Southern Oscillation (ENSO). These questions are investigated using a chemistry–climate model with a stratospheric N2O tracer; surface and aircraft-based N2O measurements; and indices for ENSO, polar lower stratospheric temperature (PLST), and the stratospheric quasi-biennial oscillation (QBO). The model simulates well-defined seasonal cycles in tropospheric N2O that are caused mainly by the seasonal descent of N2O-poor stratospheric air in polar regions with subsequent cross-tropopause transport and mixing. Similar seasonal cycles are identified in recently available N2O data from aircraft. A correlation analysis between the N2O atmospheric growth rate (AGR) anomaly in long-term surface monitoring data and the ENSO, PLST, and QBO indices reveals hemispheric differences. In the Northern Hemisphere, the surface N2O AGR is negatively correlated with winter (January–March) PLST. This correlation is consistent with an influence from the Brewer–Dobson circulation, which brings N2O-poor air from the middle and upper stratosphere into the lower stratosphere with associated warming due to diabatic descent. In the Southern Hemisphere, the N2O AGR is better correlated to QBO and ENSO indices. These different hemispheric influences on the N2O AGR are consistent with known atmospheric dynamics and the complex interaction of the QBO with the Brewer-Dobson circulation. More airborne surveys extending to the tropopause would help elucidate the stratospheric influence on tropospheric N2O, allowing for better understanding of surface sources.This research has been supported by the Earth Sciences Division (grant no. 80NSSC17K0350)

UAS Chromatograph for Atmospheric Trace Species (UCATS) – a versatile instrument for trace gas measurements on airborne platforms

UCATS (the UAS Chromatograph for Atmospheric Trace Species) was designed and built for observations of important atmospheric trace gases from unmanned aircraft systems (UAS) in the upper troposphere and lower stratosphere (UTLS). Initially it measured major chlorofluorocarbons (CFCs) and the stratospheric transport tracers nitrous oxide (N2O) and sulfur hexafluoride (SF6), using gas chromatography with electron capture detection. Compact commercial absorption spectrometers for ozone (O3) and water vapor (H2O) were added to enhance its capabilities on platforms with relatively small payloads. UCATS has since been reconfigured to measure methane (CH4), carbon monoxide (CO), and molecular hydrogen (H2) instead of CFCs and has undergone numerous upgrades to its subsystems. It has served as part of large payloads on stratospheric UAS missions to probe the tropical tropopause region and transport of air into the stratosphere; in piloted aircraft studies of greenhouse gases, transport, and chemistry in the troposphere; and in 2021 is scheduled to return to the study of stratospheric ozone and halogen compounds, one of its original goals. Each deployment brought different challenges, which were largely met or resolved. The design, capabilities, modifications, and some results from UCATS are shown and described here, including changes for future missions.Support was provided for HIPPO by NSF award no. AGS-0628452, for ATTREX by NASA Earth Venture program award no. NNA11AA55I, and for ATom by NASA award no. NNH17AE26I; additional support was provided by NASA Upper Atmosphere Research Program award no. NNH13AV69I. This work was also supported in part by the NOAA Cooperative Agreement with CIRES, NA17OAR4320101

The state of the Martian climate

60°N was +2.0°C, relative to the 1981–2010 average value (Fig. 5.1). This marks a new high for the record. The average annual surface air temperature (SAT) anomaly for 2016 for land stations north of starting in 1900, and is a significant increase over the previous highest value of +1.2°C, which was observed in 2007, 2011, and 2015. Average global annual temperatures also showed record values in 2015 and 2016. Currently, the Arctic is warming at more than twice the rate of lower latitudes

Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

Funder: NCI U24CA211006Abstract: The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) curated consensus somatic mutation calls using whole exome sequencing (WES) and whole genome sequencing (WGS), respectively. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, which aggregated whole genome sequencing data from 2,658 cancers across 38 tumour types, we compare WES and WGS side-by-side from 746 TCGA samples, finding that ~80% of mutations overlap in covered exonic regions. We estimate that low variant allele fraction (VAF < 15%) and clonal heterogeneity contribute up to 68% of private WGS mutations and 71% of private WES mutations. We observe that ~30% of private WGS mutations trace to mutations identified by a single variant caller in WES consensus efforts. WGS captures both ~50% more variation in exonic regions and un-observed mutations in loci with variable GC-content. Together, our analysis highlights technological divergences between two reproducible somatic variant detection efforts

Chloromethanes in the North American Troposphere and Lower Stratosphere Over the Past Two Decades

Abstract Aircraft observations of the four chloromethanes: carbon tetrachloride (CCl4), methyl chloride (CH3Cl), dichloromethane (CH2Cl2), and chloroform (CHCl3), collected over North America between 2000 and 2022, were used to evaluate their vertical distributions and temporal trends in the atmosphere. We examine the vertical profiles, from the surface to the lower stratosphere (LS), of these increasingly important contributors to ozone‐depleting chlorine in both altitude and potential temperature space. Airborne chloromethane trends were compared with those measured at long‐term, ground‐based monitoring stations. Below 20 km altitude, CCl4 trends were decreasing at all levels studied in the North American atmosphere (−1.1 ppt yr−1). CHCl3 and CH2Cl2 airborne observations were comparable to ground network measurements: CHCl3 increased between 2000 and 2018 and then decreased leading to a negligible trend over the 22 years studied and CH2Cl2 has been increasing at all levels in the troposphere (+2.41 ppt yr−1, 2000–2022, <20 km)