The TRY Database System

The TRY initiative (www.try-db.org) is a network of vegetation scientists providing curated plant trait data for the scientific community. The TRY Database currently contains about 7 million trait records for nearly 3000 different traits. The flexible database structure can hold any number of traits and a generic program can import any kind of data without requiring a template. About 10 million trait records for about 100 requests are released on a monthly basis. This is organized via the TRY Data Portal, which facilitates data contribution, exploration and customized requests. The Dataset Custodian Centre allows managing the status of contributed datasets and monitoring the use of these data from requests to scientific publications. The Request PI Centre allows managing and monitoring requests. Both centres facilitate direct contact of data contributors and users. In addition to the TRY Database we have established a file archive, which facilitates publication and DOIs for else unpublished plant trait datasets. The TRY Data Portal has evolved toward a long-term scientific data infrastructure, which combines the advantages of easy access to curated plant trait data almost ready for analyses, with direct contact of data providers and users, the opportunity for data providers to publish individual datasets and track the use of their data. This presentation will introduce details of the TRY database system

Plant attributes explain the distribution of soil microbial communities in two contrasting regions of the globe

We lack strong empirical evidence for links between plant attributes (plant community attributes and functional traits) and the distribution of soil microbial communities at large spatial scales. Using datasets from two contrasting regions and ecosystem types in Australia and England, we report that aboveground plant community attributes, such as diversity (species richness) and cover, and functional traits can predict a unique portion of the variation in the diversity (number of phylotypes) and community composition of soil bacteria and fungi that cannot be explained by soil abiotic properties and climate. We further identify the relative importance and evaluate the potential direct and indirect effects of climate, soil properties and plant attributes in regulating the diversity and community composition of soil microbial communities. Finally, we deliver a list of examples of common taxa from Australia and England that are strongly related to specific plant traits, such as specific leaf area index, leaf nitrogen and nitrogen fixation. Together, our work provides new evidence that plant attributes, especially plant functional traits, can predict the distribution of soil microbial communities at the regional scale and across two hemispheres

The acquisitive–conservative axis of leaf trait variation emerges even in homogeneous environments

The acquisitive-conservative axis of plant ecological strategies results in a pattern of leaf trait covariation that captures the balance between leaf construction costs and plant growth potential. Studies evaluating trait covariation within species are scarcer, and have mostly dealt with variation in response to environmental gradients. Little work has been published on intraspecific patterns of leaf trait covariation in the absence of strong environmental variation.Methods: We analysed covariation of four leaf functional traits (SLA: specific leaf area, LDMC: leaf dry matter content, Ft: force to tear, and Nm: leaf nitrogen content) in six Poaceae and four Fabaceae species common in the dry Chaco forest of Central Argentina, growing in the field and in a common garden. We compared intraspecific covariation patterns (slopes, correlation and effect size) of leaf functional traits with global interspecific covariation patterns. Additionally, we checked for possible climatic and edaphic factors that could affect the intraspecific covariation pattern.Key Results: We found negative correlations for the LDMC-SLA, Ft-SLA, LDMC-Nm , and Ft-Nm trait pairs. This intraspecific covariation pattern found both in the field and in the common garden and not be explained by climatic or edaphic variation in the field follows the expected acquisitive-conservative axis. At the same time, we found quantitative differences in slopes among different species, and between these intraspecific patterns and the interspecific ones. Many of these differences seem to be idiosyncratic, but some appear consistent among species (e.g.all the intraspecific LDMC-SLA and LDMC-Nm slopes tend to be shallower than the global).Conclusions: Our study indicates that the acquisitive-conservative leaf functional trait covariation pattern occurs at the intraspecific level even in the absence of relevant environmental variation in the field. This suggests a high degree of variation-covariation in leaf functional traits not driven by environmental variables.Fil: Gorne, Lucas Damián. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; Argentina. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales; ArgentinaFil: Díaz, Sandra Myrna. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; Argentina. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales; ArgentinaFil: Minden, Vanessa. University of Oldenburg; Alemania. Vrije Universiteit Brussel; BélgicaFil: Onoda, Yusuke. Kyoto University. School of Agriculture; JapónFil: Kramer, Koen. Wageningen University; Países BajosFil: Muir, Christopher. University Of Hawaii; Estados UnidosFil: Michaletz, Sean T. University of British Columbia; CanadáFil: Lavorel, Sandra. Centre National de la Recherche Scientifique; FranciaFil: Sharpe, Joanne. Sharplex Services, Edgecomb; Estados UnidosFil: Jansen, Steven. Universitat Ulm; AlemaniaFil: Slot, Martijn. Smithsonian Tropical Research Institute; PanamáFil: Chacon, Maximiliano Eduardo. Universidad de Costa Rica; Costa RicaFil: Boenisch, Gerhard. Max Planck Institute For Biogeochemistry; Alemani

Mapping local and global variability in plant trait distributions

Our ability to understand and predict the response of ecosystems to a changing environment depends on quantifying vegetation functional diversity. However, representing this diversity at the global scale is challenging. Typically, in Earth system models, characterization of plant diversity has been limited to grouping related species into plant functional types (PFTs), with all trait variation in a PFT collapsed into a single mean value that is applied globally. Using the largest global plant trait database and state of the art Bayesian modeling, we created fine-grained global maps of plant trait distributions that can be applied to Earth system models. Focusing on a set of plant traits closely coupled to photosynthesis and foliar respiration - specific leaf area (SLA) and dry mass-based concentrations of leaf nitrogen (Nm) and phosphorus (Pm), we characterize how traits vary within and among over 50,000 ∼50×50-km cells across the entire vegetated land surface. We do this in several ways - without defining the PFT of each grid cell and using 4 or 14 PFTs; each model's predictions are evaluated against out-of-sample data. This endeavor advances prior trait mapping by generating global maps that preserve variability across scales by using modern Bayesian spatial statistical modeling in combination with a database over three times larger than that in previous analyses. Our maps reveal that the most diverse grid cells possess trait variability close to the range of global PFT means

Climate-trait relationships exhibit strong habitat specificity in plant communities across Europe

Ecological theory predicts close relationships between macroclimate and functional traits. Yet, global climatic gradients correlate only weakly with the trait composition of local plant communities, suggesting that important factors have been ignored. Here, we investigate the consistency of climate-trait relationships for plant communities in European habitats. Assuming that local factors are better accounted for in more narrowly defined habitats, we assigned > 300,000 vegetation plots to hierarchically classified habitats and modelled the effects of climate on the community-weighted means of four key functional traits using generalized additive models. We found that the predictive power of climate increased from broadly to narrowly defined habitats for specific leaf area and root length, but not for plant height and seed mass. Although macroclimate generally predicted the distribution of all traits, its effects varied, with habitat-specificity increasing toward more narrowly defined habitats. We conclude that macroclimate is an important determinant of terrestrial plant communities, but future predictions of climatic effects must consider how habitats are defined

Unraveling Amazon tree community assembly using Maximum Information Entropy: a quantitative analysis of tropical forest ecology

In a time of rapid global change, the question of what determines patterns in species abundance distribution remains a priority for understanding the complex dynamics of ecosystems. The constrained maximization of information entropy provides a framework for the understanding of such complex systems dynamics by a quantitative analysis of important constraints via predictions using least biased probability distributions. We apply it to over two thousand hectares of Amazonian tree inventories across seven forest types and thirteen functional traits, representing major global axes of plant strategies. Results show that constraints formed by regional relative abundances of genera explain eight times more of local relative abundances than constraints based on directional selection for specific functional traits, although the latter does show clear signals of environmental dependency. These results provide a quantitative insight by inference from large-scale data using cross-disciplinary methods, furthering our understanding of ecological dynamics

Unraveling Amazon tree community assembly using Maximum Information Entropy: a quantitative analysis of tropical forest ecology

In a time of rapid global change, the question of what determines patterns in species abundance distribution remains a priority for understanding the complex dynamics of ecosystems. The constrained maximization of information entropy provides a framework for the understanding of such complex systems dynamics by a quantitative analysis of important constraints via predictions using least biased probability distributions. We apply it to over two thousand hectares of Amazonian tree inventories across seven forest types and thirteen functional traits, representing major global axes of plant strategies. Results show that constraints formed by regional relative abundances of genera explain eight times more of local relative abundances than constraints based on directional selection for specific functional traits, although the latter does show clear signals of environmental dependency. These results provide a quantitative insight by inference from large-scale data using cross-disciplinary methods, furthering our understanding of ecological dynamics

Chronic fertilization and irrigation gradually and increasingly restructure grassland communities

Scientists have known for over a century that resource addition can lead to species loss from plant communities. Recent studies have also shown that resource addition can substantially restructure communities by altering their functional and taxonomic composition—even when species richness remains unchanged. Understanding which aspects of community structure are impacted by different resources and over which timescales will provide insight for management decisions and may also elucidate which measures can act as early warning indicators for subsequent changes in the community. Here, we take advantage of a long‐term factorial experiment to understand how grassland plant communities respond to a decade of nitrogen fertilization (14 g N·m−2·yr−1) and irrigation (25 mm water/week during the growing season). After 10 yr, fertilization and irrigation decreased species richness by 22% and 9%, while functional richness decreased by 31% and 41%. Abundance‐weighted functional distance between treatments and controls increased by 55% and 24%, respectively. We expected that abundance‐weighted measures would shift before presence–absence‐based measures, but found limited evidence for this. Instead, our results suggest that species gains, which can occur quickly because they require the addition of only one individual, may serve as early indicators for subsequent community restructuring in the opposite direction. Overall, both chronic nitrogen fertilization and irrigation tended to have gradual and increasing impacts on community structure, but the magnitude of these effects varied greatly depending on the aspect of community structure investigated. Further study will be needed to determine the extent to which our results can be generalized to other resources or sites in order to develop management strategies to maintain both taxonomic and functional trait diversity in the face of chronic resource changes

A Generic structure for plant trait databases

P>1. Plant traits are fundamental for understanding and predicting vegetation responses to global changes, and they provide a promising basis towards a more quantitative and predictive approach to ecology. As a consequence, information on plant traits is rapidly accumulating, and there is a growing need for efficient database tools that enable the assembly and synthesis of trait data. 2. Plant traits are highly heterogeneous, exhibit a low degree of standardization and are linked and interdependent at various levels of biological organization: tissue, organ, plant and population. Therefore, they often require ancillary data for interpretation, including descriptors of the biotic and abiotic environment, methods and taxonomic relationships. 3. We introduce a generic database structure that is tailored to accommodate plant trait complexity and is consistent with current theoretical approaches to characterize the structure of observational data. The over-arching utility of the proposed database structure is illustrated based on two independent plant trait database projects. 4. The generic database structure proposed here is meant to serve as a flexible blueprint for future plant trait databases, improving data discovery, and ensuring compatibility among them.12 page(s

The acquisitive-conservative axis of leaf trait variation emerges even in homogeneous environments

BACKGROUND AND AIMS: The acquisitive-conservative axis of plant ecological strategies results in a pattern of leaf trait covariation that captures the balance between leaf construction costs and plant growth potential. Studies evaluating trait covariation within species are scarcer, and have mostly dealt with variation in response to environmental gradients. Little work has been published on intraspecific patterns of leaf trait covariation in the absence of strong environmental variation. METHODS: We analysed covariation of four leaf functional traits [specific leaf area (SLA) leaf dry matter content (LDMC), force to tear (Ft) and leaf nitrogen content (Nm)] in six Poaceae and four Fabaceae species common in the dry Chaco forest of Central Argentina, growing in the field and in a common garden. We compared intraspecific covariation patterns (slopes, correlation and effect size) of leaf functional traits with global interspecific covariation patterns. Additionally, we checked for possible climatic and edaphic factors that could affect the intraspecific covariation pattern. KEY RESULTS: We found negative correlations for the LDMC-SLA, Ft-SLA, LDMC-Nm and Ft-Nm trait pairs. This intraspecific covariation pattern found both in the field and in the common garden and not explained by climatic or edaphic variation in the field follows the expected acquisitive-conservative axis. At the same time, we found quantitative differences in slopes among different species, and between these intraspecific patterns and the interspecific ones. Many of these differences seem to be idiosyncratic, but some appear consistent among species (e.g. all the intraspecific LDMC-SLA and LDMC-Nm slopes tend to be shallower than the global pattern). CONCLUSIONS: Our study indicates that the acquisitive-conservative leaf functional trait covariation pattern occurs at the intraspecific level even in the absence of relevant environmental variation in the field. This suggests a high degree of variation-covariation in leaf functional traits not driven by environmental variables