Perinatal aspects on the covid-19 pandemic: a practical resource for perinatal-neonatal specialists.

BackgroundLittle is known about the perinatal aspects of COVID-19.ObjectiveTo summarize available evidence and provide perinatologists/neonatologists with tools for managing their patients.MethodsAnalysis of available literature on COVID-19 using Medline and Google scholar.ResultsFrom scant data: vertical transmission from maternal infection during the third trimester probably does not occur or likely it occurs very rarely. Consequences of COVID-19 infection among women during early pregnancy remain unknown. We cannot conclude if pregnancy is a risk factor for more severe disease in women with COVID-19. Little is known about disease severity in neonates, and from very few samples, the presence of SARS-CoV-2 has not been documented in human milk. Links to websites of organizations with updated COVID-19 information are provided. Infographics summarize an approach to the pregnant woman or neonate with suspected or confirmed COVID-19.ConclusionsAs the pandemic continues, more data will be available that could lead to changes in current knowledge and recommendations

Influence of Sea Surface Temperature on the Gonadal development of Sea urchin Temnopleurus toreumaticus from the Gulf of Mannar, South East Coast of India

This study was conducted for a 20 months period from October 2013 to May 2015 in Gulf of Mannar, south east coast of India. During the investigation the abiotic factors viz., Sea surface temperature (SST), Daylight photoperiod and atmospheric temperature data were collected from International comprehensive Ocean Atmospheric Database (ICOADS) and the reproductive cycle of the sea urchin was studied from the monthly sampling of sea urchin collected from Vedalai landing centre in Gulf of Mannar. The gonads were studied to calculate Gonad index as well histological to categories them into four different stages of the development and this data was compared with abiotic factors to study the influence of it on the reproductive behaviour of sea urchin. The data were analyzed statistically through Pearson correlation and it was found negative between mean monthly gonad index and day length photoperiod, as well as with SST. This clearly indicates that the gonadal development in sea urchin is very much influenced by these two abiotic factors; however other nutritional factors might play greater role in the development gonad

भारत में शूलचर्मी पालन में संभावनाएं

Prospects of Echiniculture in Indi

Geometry of gene regulatory dynamics

Embryonic development leads to the reproducible and ordered appearance of complexity from egg to adult. The successive differentiation of different cell types that elaborate this complexity results from the activity of gene networks and was likened by Waddington to a flow through a landscape in which valleys represent alternative fates. Geometric methods allow the formal representation of such landscapes and codify the types of behaviors that result from systems of differential equations. Results from Smale and coworkers imply that systems encompassing gene network models can be represented as potential gradients with a Riemann metric, justifying the Waddington metaphor. Here, we extend this representation to include parameter dependence and enumerate all three-way cellular decisions realizable by tuning at most two parameters, which can be generalized to include spatial coordinates in a tissue. All diagrams of cell states vs. model parameters are thereby enumerated. We unify a number of standard models for spatial pattern formation by expressing them in potential form (i.e., as topographic elevation). Turing systems appear nonpotential, yet in suitable variables the dynamics are low dimensional and potential. A time-independent embedding recovers the original variables. Lateral inhibition is described by a saddle point with many unstable directions. A model for the patterning of the Drosophila eye appears as relaxation in a bistable potential. Geometric reasoning provides intuitive dynamic models for development that are well adapted to fit time-lapse data

Echinoid landings at Mandapam, south-east coast of India with a note on gonadal maturity of two species of sea urchins

The sea urchins, belonging to phylum Echinodermata, are a good source of “roe”, (gonads) and are being consumed by humans since pre-historic times. In many countries of the world, it is a delicacy among the food items and in retail markets in Japan, it is sold at prices as high as US$ 600 kg-1. Among the 800 species of echinoids, 105 species are found along the east coast of India and 30 species are recorded along the coast of Tamil Nadu. There is a paucity of information on the biology and ecology of sea urchins and lack of studies on its edibility and palatability. The sea urchin aquaculture called as echiniculture is picking up in subtropics and temperate areas. Importantly, the tropical marine ecosystem of India, which supports diverse flora and fauna is a suitable environment for echiniculture, and the future research needs to be focused to find out the potential species and developing techniques for their aquaculture. The present investigation analysed the landings of echinoderms in the Gulf of Mannar and Palk Bay along the south-east coast of India and also studied the gonadal maturity of two species of sea urchins viz., Salmacis virgulata and Temnopleurus toreumaticus in order to assess their suitability for echiniculture. S. virgulata and T. toreumaticus formed 70 and 30% respectively of the sea urchins landings at Vedalai and Pampan landing centres. The overall sex ratio of both the species did not deviate significantly from 1:1. In S. virgulata the mean monthly gonad index was highest (9.62±0.46) during September 2014 and for T. toreumaticus, the peak GSI was observed during December 2013. Further studies on captive maturation and breeding are needed to explore the potential of these species for echiniculture

Studies on the Influence of Abiotic Factors in the Gonadal Index of Sea urchin Salmacis virgulata from the Gulf of Mannar, South East Coast of India

The present study was conducted to find out whether the abiotic factors in Gulf of Mannar viz., Sea Surface Temperature (SST) and Day light photoperiod would have an effect on the Gonado somatic index of the dominant sea urchin species Salmacis virgulata. A sampling survey for 20 months was conducted from October-2013 to May-2015 in Vedalai landing centre, along the Gulf of Mannar. The freshly collected sea urchin were brought to Mandapam CMFRI and their Gonado Somatic Index (GSI) was estimated. The remote sensing data of the SST from Gulf of Mannar sourced from ICOADS and the daylight photoperiod were compared with the GSI data for 20 months in order to assess the synchrony among the three parameters. The pearson correlation coefficient of the association among the GSI, SST and Photoperiod revealed that there was no significant correlation (p>0.001). The result of the present study revealed that the Gonado Somatic Index of S. virgulata is independent of abiotic factors, which is in contrast to the temperate sea urchin species, where SST and Photoperiod play a major role in gonadal development

Correlates of the molecular vaginal microbiota composition of African women.

BACKGROUND: Sociodemographic, behavioral and clinical correlates of the vaginal microbiome (VMB) as characterized by molecular methods have not been adequately studied. VMB dominated by bacteria other than lactobacilli may cause inflammation, which may facilitate HIV acquisition and other adverse reproductive health outcomes. METHODS: We characterized the VMB of women in Kenya, Rwanda, South Africa and Tanzania (KRST) using a 16S rDNA phylogenetic microarray. Cytokines were quantified in cervicovaginal lavages. Potential sociodemographic, behavioral, and clinical correlates were also evaluated. RESULTS: Three hundred thirteen samples from 230 women were available for analysis. Five VMB clusters were identified: one cluster each dominated by Lactobacillus crispatus (KRST-I) and L. iners (KRST-II), and three clusters not dominated by a single species but containing multiple (facultative) anaerobes (KRST-III/IV/V). Women in clusters KRST-I and II had lower mean concentrations of interleukin (IL)-1α (p < 0.001) and Granulocyte Colony Stimulating Factor (G-CSF) (p = 0.01), but higher concentrations of interferon-γ-induced protein (IP-10) (p < 0.01) than women in clusters KRST-III/IV/V. A lower proportion of women in cluster KRST-I tested positive for bacterial sexually transmitted infections (STIs; ptrend = 0.07) and urinary tract infection (UTI; p = 0.06), and a higher proportion of women in clusters KRST-I and II had vaginal candidiasis (ptrend = 0.09), but these associations did not reach statistical significance. Women who reported unusual vaginal discharge were more likely to belong to clusters KRST-III/IV/V (p = 0.05). CONCLUSION: Vaginal dysbiosis in African women was significantly associated with vaginal inflammation; the associations with increased prevalence of STIs and UTI, and decreased prevalence of vaginal candidiasis, should be confirmed in larger studies

Assessing the carcinogenic potential of low-dose exposures to chemical mixtures in the environment: the challenge ahead.

Lifestyle factors are responsible for a considerable portion of cancer incidence worldwide, but credible estimates from the World Health Organization and the International Agency for Research on Cancer (IARC) suggest that the fraction of cancers attributable to toxic environmental exposures is between 7% and 19%. To explore the hypothesis that low-dose exposures to mixtures of chemicals in the environment may be combining to contribute to environmental carcinogenesis, we reviewed 11 hallmark phenotypes of cancer, multiple priority target sites for disruption in each area and prototypical chemical disruptors for all targets, this included dose-response characterizations, evidence of low-dose effects and cross-hallmark effects for all targets and chemicals. In total, 85 examples of chemicals were reviewed for actions on key pathways/mechanisms related to carcinogenesis. Only 15% (13/85) were found to have evidence of a dose-response threshold, whereas 59% (50/85) exerted low-dose effects. No dose-response information was found for the remaining 26% (22/85). Our analysis suggests that the cumulative effects of individual (non-carcinogenic) chemicals acting on different pathways, and a variety of related systems, organs, tissues and cells could plausibly conspire to produce carcinogenic synergies. Additional basic research on carcinogenesis and research focused on low-dose effects of chemical mixtures needs to be rigorously pursued before the merits of this hypothesis can be further advanced. However, the structure of the World Health Organization International Programme on Chemical Safety 'Mode of Action' framework should be revisited as it has inherent weaknesses that are not fully aligned with our current understanding of cancer biology

Pan-Cancer Analysis of lncRNA Regulation Supports Their Targeting of Cancer Genes in Each Tumor Context

Long noncoding RNAs (lncRNAs) are commonly dys-regulated in tumors, but only a handful are known toplay pathophysiological roles in cancer. We inferredlncRNAs that dysregulate cancer pathways, onco-genes, and tumor suppressors (cancer genes) bymodeling their effects on the activity of transcriptionfactors, RNA-binding proteins, and microRNAs in5,185 TCGA tumors and 1,019 ENCODE assays.Our predictions included hundreds of candidateonco- and tumor-suppressor lncRNAs (cancerlncRNAs) whose somatic alterations account for thedysregulation of dozens of cancer genes and path-ways in each of 14 tumor contexts. To demonstrateproof of concept, we showed that perturbations tar-geting OIP5-AS1 (an inferred tumor suppressor) andTUG1 and WT1-AS (inferred onco-lncRNAs) dysre-gulated cancer genes and altered proliferation ofbreast and gynecologic cancer cells. Our analysis in-dicates that, although most lncRNAs are dysregu-lated in a tumor-specific manner, some, includingOIP5-AS1, TUG1, NEAT1, MEG3, and TSIX, synergis-tically dysregulate cancer pathways in multiple tumorcontexts

Pan-cancer Alterations of the MYC Oncogene and Its Proximal Network across the Cancer Genome Atlas

Although theMYConcogene has been implicated incancer, a systematic assessment of alterations ofMYC, related transcription factors, and co-regulatoryproteins, forming the proximal MYC network (PMN),across human cancers is lacking. Using computa-tional approaches, we define genomic and proteo-mic features associated with MYC and the PMNacross the 33 cancers of The Cancer Genome Atlas.Pan-cancer, 28% of all samples had at least one ofthe MYC paralogs amplified. In contrast, the MYCantagonists MGA and MNT were the most frequentlymutated or deleted members, proposing a roleas tumor suppressors.MYCalterations were mutu-ally exclusive withPIK3CA,PTEN,APC,orBRAFalterations, suggesting that MYC is a distinct onco-genic driver. Expression analysis revealed MYC-associated pathways in tumor subtypes, such asimmune response and growth factor signaling; chro-matin, translation, and DNA replication/repair wereconserved pan-cancer. This analysis reveals insightsinto MYC biology and is a reference for biomarkersand therapeutics for cancers with alterations ofMYC or the PMN