Numerical Simulation of non Linear Behavior of Laterally Loaded Pile

International audienceDue to the recent research advances in understanding mechanisms which govern the deep behavior foundations, now the vertical piles can be used to support correctly lateral loads. The paper concerns the development of a computer program for studying non linear behavior of lateral loaded piles taking into account the shear stress at the sand interface layers. Some examples issued from the use of the numerical code are compared with experimental results from centrifuge modelling loaded piles tests. The influence that a shear stress at the soil on the behavior laterally loaded piles was also studied

Specific loop modifications of the thrombin-binding aptamer trigger the formation of parallel structures

Guanine-rich sequences show large structural variability, with folds ranging from duplex to triplex and quadruplex helices. Quadruplexes are polymorphic, and can show multiple stoichiometries, parallel and antiparallel strand alignments, and different topological arrangements. We analyze here the equilibrium between intramolecular antiparallel and intermolecular parallel G-quadruplexes in the thrombin-binding aptamer (TBA) sequence. Our theoretical and experimental studies demonstrate that an apparently simple modification at the loops of TBA induces a large change in the monomeric antiparallel structure of TBA to yield a parallel G-quadruplex showing a novel T-tetrad. The present results illustrate the extreme polymorphism of G-quadruplexes and the ease with which their conformation in solution can be manipulated by nucleotide modification.This work was supported by the Spanish Ministry of Science and Innovation, MICINN (CTQ2010-20541, CTQ2012-38616, BIO2009-10964 and Consolider E-Science), the Generalitat de Catalunya, (2009/SGR/208), the University of Milano (PUR 2009 Funds), the funds de la Recherche ScientifiqueFNRS (VG research associate position and FRFC grant 2.4528.11) and PRIN09 (2009Prot- 2009J54YAP_005). RF is a recipient of a FPI predoctoral contract (MICINN) and a STSM from COST (G4net, MP0802). GP is a recipient of a Sara Borrell postdoctoral fellowship. Collaborative research was funded by a Cost action (G4net, MP0802) and an Italian-Spanish collaborative action (IT2009-0067). CIBER-BBN is an initiative funded by the VI National R&D&i Plan 2008-2011, Iniciativa Ingenio 2010, Consolider Program, CIBER Actions and financed by the Instituto de Salud Carlos III with assistance from the European Regional Development Fund.Peer reviewe