84 research outputs found

    OsTIR1 and OsAFB2 Downregulation via OsmiR393 Overexpression Leads to More Tillers, Early Flowering and Less Tolerance to Salt and Drought in Rice

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    The microRNA miR393 has been shown to play a role in plant development and in the stress response by targeting mRNAs that code for the auxin receptors in Arabidopsis. In this study, we verified that two rice auxin receptor gene homologs (OsTIR1 and OsAFB2) could be targeted by OsmiR393 (Os for Oryza sativa). Two new phenotypes (increased tillers and early flowering) and two previously observed phenotypes (reduced tolerance to salt and drought and hyposensitivity to auxin) were observed in the OsmiR393-overexpressing rice plants. The OsmiR393-overexpressing rice demonstrated hyposensitivity to synthetic auxin-analog treatments. These data indicated that the phenotypes of OsmiR393-overexpressing rice may be caused through hyposensitivity to the auxin signal by reduced expression of two auxin receptor genes (OsTIR1 and OsAFB2). The expression of an auxin transporter (OsAUX1) and a tillering inhibitor (OsTB1) were downregulated by overexpression of OsmiR393, which suggested that a gene chain from OsmiR393 to rice tillering may be from OsTIR1 and OsAFB2 to OsAUX1, which affected the transportation of auxin, then to OsTB1, which finally controlled tillering. The positive phenotypes (increased tillers and early flowering) and negative phenotypes (reduced tolerance to salt and hyposensitivity to auxin) of OsmiR393-overexpressing rice present a dilemma for molecular breeding

    The Rapid Decay of the Optical Emission from GRB 980326 and its Possible Implications

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    We report the discovery of the optical counterpart to GRB 980326. Its rapid optical decay can be characterized by a power law with exponent -2.10 +/- 0.13 and a constant underlying source at R_c=25.5 +/- 0.5. Its optical colours 2.1 days after the burst imply a spectral slope of -0.66 +/- 0.70. The gamma-ray spectrum as observed with BATSE shows that it is among the 4% softest bursts ever recorded. We argue that the rapid optical decay may be a reason for the non-detection of some low-energy afterglows of GRBs.Comment: 13 pages, 3 Postscipt figures, Astrophysical Journal Letters, accepted May 29, 199

    The transverse momentum dependence of charged kaon Bose-Einstein correlations in the SELEX experiment

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    CNPQ - CONSELHO NACIONAL DE DESENVOLVIMENTO CIENTÍFICO E TECNOLÓGICOFAPESP - FUNDAÇÃO DE AMPARO À PESQUISA DO ESTADO DE SÃO PAULOWe report the measurement of the one-dimensional charged kaon correlation functions using 600GeV/c σ-, π- and 540GeV/c p beams from the SELEX (E781) experiment at the Fermilab Tevatron. K±K± correlation functions are studied for three transverse pair momentum, kT, ranges and parameterized by a Gaussian form. The emission source radii, R, and the correlation strength, λ, are extracted. The analysis shows a decrease of the source radii with increasing kaon transverse pair momentum for all beam types. © 2015 The Authors.We report the measurement of the one-dimensional charged kaon correlation functions using 600GeV/c σ-, π- and 540GeV/c p beams from the SELEX (E781) experiment at the Fermilab Tevatron. K±K± correlation functions are studied for three transverse pair momentum, kT, ranges and parameterized by a Gaussian form. The emission source radii, R, and the correlation strength, λ, are extracted. The analysis shows a decrease of the source radii with increasing kaon transverse pair momentum for all beam types.753458464CNPQ - CONSELHO NACIONAL DE DESENVOLVIMENTO CIENTÍFICO E TECNOLÓGICOFAPESP - FUNDAÇÃO DE AMPARO À PESQUISA DO ESTADO DE SÃO PAULOCNPQ - CONSELHO NACIONAL DE DESENVOLVIMENTO CIENTÍFICO E TECNOLÓGICOFAPESP - FUNDAÇÃO DE AMPARO À PESQUISA DO ESTADO DE SÃO PAULOSem informaçãoSem informaçãoRuss, J.S., Akchurin, N., Andreev, V.A., First charm hadroproduction results from SELEX (1998) ICHEP'98 Proc. Int. Conf. on High Energy Physics II, p. 1259. , arxiv:hep-ex/9812031Goldhaber, G., Fowler, W.B., Goldhaber, S., Hoang, T.F., Kalogeropoulos, T.E., Powell, W.M., Pion-pion correlations in antiproton annihilation events (1959) Phys. Rev. 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D, 87. , arxiv:1212.5958v2Khachatryan, V., Measurement of Bose-Einstein correlations in pp collisions at s = 0.9 and 7 TeV (2011) J. High Energy Phys., 5. , arxiv:1101.3518Akkelin, S.V., Sinyukov, Y.M., Deciphering nonfemtoscopic two-pion correlations in p+p collisions with simple analytical models (2012) Phys. Rev. D, 85. , arxiv:1106.5120Lednický, R., Progulova, T.B., Influence of resonances on Bose-Einstein correlations of identical pions (1992) Z. Phys. C, 55, pp. 295-305Lisa, M., Pratt, S., Soltz, R., Wiedemann, U., Femtoscopy in relativistic heavy ion collisions: two decades of progress (2005) Annu. Rev. Nucl. Part. Sci., 55, pp. 357-402. , arxiv:nucl-ex/0505014Pratt, S., Pion interferometry for exploding sources (1984) Phys. Rev. Lett., 53, pp. 1219-1221Abbiendi, G., Bose-Einstein study of position-momentum correlations of charged pions in hadronic Z0 decays (2007) Eur. Phys. J. 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D, 48, pp. 1931-1942Csorgo, T., Kittel, W., Metzger, W.J., Novák, T., Parametrization of Bose-Einstein correlations and reconstruction of the space-time evolution of pion production in e+e- annihilation (2008) Phys. Lett. B, 663, pp. 214-216. , arxiv:0803.3528Bialas, A., Kucharczyk, M., Palka, H., Zalewski, K., Mass dependence of HBT correlations in e+e- annihilation (2000) Phys. Rev. D, 62. , arxiv:hep-ph/0006290Alexander, G., Open questions related to Bose-Einstein correlations in e+e- → hadrons (2004) Acta Phys. Pol. B, 35, pp. 69-76. , arxiv:hep-ph/0311114Alexander, G., Mass and transverse mass effects on the hadron emitter size (2001) Phys. Lett. B, 506, pp. 45-51. , arxiv:hep-ph/0101319The authors are indebted to the staff of Fermi National Accelerator Laboratory and for invaluable technical support from the staffs of collaborating institutions. This project was supported in part by Bundesministerium für Bildung, Wissenschaft, Forschung und Technologie, Consejo Nacional de Ciencia y Tecnología (CONACyT), Conselho Nacional de Desenvolvimento Científico e Tecnológico, Fondo de Apoyo a la Investigación (UASLP), Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP), the Israel Science Foundation founded by the Israel Academy of Sciences and Humanities, Istituto Nazionale di Fisica Nucleare (INFN), the International Science Foundation (ISF), the National Science Foundation, NATO, the Russian Academy of Sciences, the Russian Ministry of Science and Technology, the Russian Foundation for Basic Research (research project No. 11-02-01302-a), the Secretaría de Educación Pública (Mexico), the Turkish Scientific and Technological Research Board (TÜBİTAK), and the U.S. Department of Energy. We thank ITEP and National Research Nuclear University MEPhI (Moscow Engineering Physics Institute) for providing computing powers and support for data analysis and simulations. The authors also would like to thank Prof. Michael Lisa and Prof. Richard Lednický for helpful comments and fruitful discussions

    First Observation of the Cabibbo-suppressed Decays Xi_c+ -> Sigma+ pi- pi+ and Xi_c+ -> Sigma- pi+ pi+ and Measurement of their Branching Ratios

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    We report the first observation of two Cabibbo-suppressed decay modes, Xi_c+ -> Sigma+ pi- pi+ and Xi_c+ -> Sigma- pi+ pi+. We observe 59+/-14 over a background of 87, and 22+/-8 over a background of 13 events, respectively, for the signals. The data were accumulated using the SELEX spectrometer during the 1996-1997 fixed target run at Fermilab, chiefly from a 600GeV/c Sigma- beam. The branching ratios of the decays relative to the Cabibbo--favored Xi_c+ -> Xi- pi+ pi+ are measured to be B(Xi_c+ -> Sigma+ pi- pi+)/B(Xi_c+ -> Xi- pi+ pi+) = 0.48+/-0.20, and B(Xi_c+ -> Sigma- pi+ pi+)/B(Xi_c+ -> Xi- pi+ pi+) = 0.18+/-0.09, respectively. We also report branching ratios for the same decay modes of the Lambda_c+ relative to Lambda_c+ -> p K- pi+.Comment: 15 pages, 5 figures, version 2 as accepted in PL

    Elective Cancer Surgery in COVID-19-Free Surgical Pathways During the SARS-CoV-2 Pandemic: An International, Multicenter, Comparative Cohort Study.

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    PURPOSE: As cancer surgery restarts after the first COVID-19 wave, health care providers urgently require data to determine where elective surgery is best performed. This study aimed to determine whether COVID-19-free surgical pathways were associated with lower postoperative pulmonary complication rates compared with hospitals with no defined pathway. PATIENTS AND METHODS: This international, multicenter cohort study included patients who underwent elective surgery for 10 solid cancer types without preoperative suspicion of SARS-CoV-2. Participating hospitals included patients from local emergence of SARS-CoV-2 until April 19, 2020. At the time of surgery, hospitals were defined as having a COVID-19-free surgical pathway (complete segregation of the operating theater, critical care, and inpatient ward areas) or no defined pathway (incomplete or no segregation, areas shared with patients with COVID-19). The primary outcome was 30-day postoperative pulmonary complications (pneumonia, acute respiratory distress syndrome, unexpected ventilation). RESULTS: Of 9,171 patients from 447 hospitals in 55 countries, 2,481 were operated on in COVID-19-free surgical pathways. Patients who underwent surgery within COVID-19-free surgical pathways were younger with fewer comorbidities than those in hospitals with no defined pathway but with similar proportions of major surgery. After adjustment, pulmonary complication rates were lower with COVID-19-free surgical pathways (2.2% v 4.9%; adjusted odds ratio [aOR], 0.62; 95% CI, 0.44 to 0.86). This was consistent in sensitivity analyses for low-risk patients (American Society of Anesthesiologists grade 1/2), propensity score-matched models, and patients with negative SARS-CoV-2 preoperative tests. The postoperative SARS-CoV-2 infection rate was also lower in COVID-19-free surgical pathways (2.1% v 3.6%; aOR, 0.53; 95% CI, 0.36 to 0.76). CONCLUSION: Within available resources, dedicated COVID-19-free surgical pathways should be established to provide safe elective cancer surgery during current and before future SARS-CoV-2 outbreaks

    Elective cancer surgery in COVID-19-free surgical pathways during the SARS-CoV-2 pandemic: An international, multicenter, comparative cohort study

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    PURPOSE As cancer surgery restarts after the first COVID-19 wave, health care providers urgently require data to determine where elective surgery is best performed. This study aimed to determine whether COVID-19–free surgical pathways were associated with lower postoperative pulmonary complication rates compared with hospitals with no defined pathway. PATIENTS AND METHODS This international, multicenter cohort study included patients who underwent elective surgery for 10 solid cancer types without preoperative suspicion of SARS-CoV-2. Participating hospitals included patients from local emergence of SARS-CoV-2 until April 19, 2020. At the time of surgery, hospitals were defined as having a COVID-19–free surgical pathway (complete segregation of the operating theater, critical care, and inpatient ward areas) or no defined pathway (incomplete or no segregation, areas shared with patients with COVID-19). The primary outcome was 30-day postoperative pulmonary complications (pneumonia, acute respiratory distress syndrome, unexpected ventilation). RESULTS Of 9,171 patients from 447 hospitals in 55 countries, 2,481 were operated on in COVID-19–free surgical pathways. Patients who underwent surgery within COVID-19–free surgical pathways were younger with fewer comorbidities than those in hospitals with no defined pathway but with similar proportions of major surgery. After adjustment, pulmonary complication rates were lower with COVID-19–free surgical pathways (2.2% v 4.9%; adjusted odds ratio [aOR], 0.62; 95% CI, 0.44 to 0.86). This was consistent in sensitivity analyses for low-risk patients (American Society of Anesthesiologists grade 1/2), propensity score–matched models, and patients with negative SARS-CoV-2 preoperative tests. The postoperative SARS-CoV-2 infection rate was also lower in COVID-19–free surgical pathways (2.1% v 3.6%; aOR, 0.53; 95% CI, 0.36 to 0.76). CONCLUSION Within available resources, dedicated COVID-19–free surgical pathways should be established to provide safe elective cancer surgery during current and before future SARS-CoV-2 outbreaks

    Detection of all four dengue serotypes in Aedes aegypti female mosquitoes collected in a rural area in Colombia

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    The Aedes aegypti vector for dengue virus (DENV) has been reported in urban and periurban areas. The information about DENV circulation in mosquitoes in Colombian rural areas is limited, so we aimed to evaluate the presence of DENV in Ae. aegypti females caught in rural locations of two Colombian municipalities, Anapoima and La Mesa. Mosquitoes from 497 rural households in 44 different rural settlements were collected. Pools of about 20 Ae. aegypti females were processed for DENV serotype detection. DENV in mosquitoes was detected in 74% of the analysed settlements with a pool positivity rate of 62%. The estimated individual mosquito infection rate was 4.12% and the minimum infection rate was 33.3/1,000 mosquitoes. All four serotypes were detected; the most frequent being DENV-2 (50%) and DENV-1 (35%). Two-three serotypes were detected simultaneously in separate pools. This is the first report on the co-occurrence of natural DENV infection of mosquitoes in Colombian rural areas. The findings are important for understanding dengue transmission and planning control strategies. A potential latent virus reservoir in rural areas could spill over to urban areas during population movements. Detecting DENV in wild-caught adult mosquitoes should be included in the development of dengue epidemic forecasting models

    Nuclear Dependence Of Charm Production

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    Using data taken by SELEX during the 1996-1997 fixed target run at Fermilab, we study the production of charmed hadrons on copper and carbon targets with ∑ -, p, π -, and π + beams. Parametrizing the dependence of the inclusive production cross section on the atomic number A as A α, we determine α for D +, D 0, D s +, D +(2010), Λ c +, and their respective anti-particles, as a function of their transverse momentum p t and scaled longitudinal momentum x F . Within our statistics there is no dependence of α on x F for any charm species for the interval 0.1<x F <1.0. The average value of α for charm production by pion beams is α meson=0.850±0.028. This is somewhat larger than the corresponding average α baryon=0.755±0.016 for charm production by baryon beams (∑ -, p). © 2009 Springer-Verlag/Società Italiana di Fisica.644637644Cobbaert, H., (1987) Phys. Lett. B, 191, p. 456. , 10.1016/0370-2693(87)90639-3 1987PhLB.191.456CCobbaert, H., (1988) Phys. Lett. B, 206, p. 546. , 10.1016/0370-2693(88)91627-9Cobbaert, H., (1988) Phys. Lett. B, 213, p. 395. , 10.1016/0370-2693(88)91783-2 1988PhLB.213.395CLeitch, M.J., (2000) Phys. Rev. Lett., 84, p. 3256. , 10.1103/PhysRevLett.84.3256 2000PhRvL.84.3256L arXiv:nucl-ex/9909007Alessandro, B., Alexa, C., Arnaldi, R., Atayan, M., Baglin, C., Baldit, A., Beole, S., Willis, N., Charmonium production and nuclear absorption in p-A interactions at 450 GeV (2004) European Physical Journal C, 33 (1), pp. 31-40. , DOI 10.1140/epjc/s2003-01539-yAbt, I., (2009) Eur. Phys. J. C, 60, p. 525. , 10.1140/epjc/s10052-009-0965-7 2009EPJC.60.525A arXiv:0812.0734 [hep-ex]Heller, K.J., (1977) Phys. Rev. D, 16, p. 2737. , 10.1103/PhysRevD.16.2737 1977PhRvD.16.2737HSkubic, P., (1978) Phys. Rev. D, 18, p. 3115. , 10.1103/PhysRevD.18.3115 1978PhRvD.18.3115SAleev, A.N., (1987) Sov. J. Nucl. Phys., 46, p. 657. , [Yad. Fiz. 46, 1127 (1987)]Vecko, M., (1989) Czech. J. Phys. B, 39, p. 297. , 10.1007/BF01597781 1989CzJPh.39.297VAdamovich, M., (1992) Phys. Lett. B, 284, p. 453. , 10.1016/0370-2693(92)90460-L 1992PhLB.284.453AAlves, G.A., (1993) Phys. Rev. Lett., 70, p. 722. , 10.1103/PhysRevLett.70.722 1993PhRvL.70.722AAlves, G.A., (1994) Phys. Rev. D, 49, p. 4317. , 10.1103/PhysRevD.49.R4317 1994PhRvD.49.4317ALeitch, M.J., (1994) Phys. Rev. Lett., 72, p. 2542. , 10.1103/PhysRevLett.72.2542 1994PhRvL.72.2542LAdamovich, M., (1997) Nucl. Phys. B, 495, p. 3. , 10.1016/S0550-3213(97)00223-X 1997NuPhB.495.3AApanasevich, L., (1997) Phys. Rev. D, 56, p. 1391. , 10.1103/PhysRevD.56.1391 1997PhRvD.56.1391A arXiv:hep-ex/9702014Abt, I., (2007) Eur. Phys. J. C, 52, p. 531. , 10.1140/epjc/s10052-007-0427-z 2007EPJC.52.531A arXiv:0708.1443 [hep-ex]Duffy, M.E., (1985) Phys. Rev. Lett., 55, p. 1816. , 10.1103/PhysRevLett.55.1816 1985PhRvL.55.1816DVogt, R., The A dependence of open charm and bottom production (2003) International Journal of Modern Physics E, 12 (2), pp. 211-269. , DOI 10.1142/S0218301303001272Lourenco, C., Wohri, H.K., Heavy-flavour hadro-production from fixed-target to collider energies (2006) Physics Reports, 433 (3), pp. 127-180. , DOI 10.1016/j.physrep.2006.05.005, PII S0370157306001815Frawley, A.D., Ullrich, T., Vogt, R., (2008) Phys. Rept., 462, p. 125. , 10.1016/j.physrep.2008.04.002 2008PhR.462.125F arXiv:0806.1013 [nucl-ex]Russ, J.S., (1998) Proceedings of the 29th International Conference on High Energy Physics II World Scientific Singapore, 1259. , A. Astbury (eds), et al. arXiv:hep-ex/9812031Russ, J.S., (1998) Proceedings of the 29th International Conference on High Energy Physics, 2, p. 1259. , ed. by A. Astbury, et al. (World Scientific, Singapore) arXiv:hep-ex/9812031Engelfried, J., (1999) Nucl. Instrum. Methods A, 431, p. 53. , 10.1016/S0168-9002(99)00043-1 1999NIMPA.431.53E arXiv:hep-ex/9811001Kushnirenko, A., Alkhazov, G., Atamantchouk, A.G., Balatz, M.Y., Bondar, N.F., Cooper, P.S., Dauwe, L.J., Vishnyakov, V.E., Precision measurements of the ∧c+ and D 0 lifetimes (2001) Physical Review Letters, 86 (23), pp. 5243-5246. , DOI 10.1103/PhysRevLett.86.5243Garcia, F.G., (2002) Phys. Lett. B, 528, p. 49. , 10.1016/S0370-2693(01)01484-8 2002PhLB.528.49S arXiv:hep-ex/0109017Kaya, M., (2003) Phys. Lett. B, 558, p. 34. , 10.1016/S0370-2693(03)00246-6 2003PhLB.558.34S arXiv:hep-ex/0302039Brodsky, S.J., Kopeliovich, B., Schmidt, I., Soffer, J., (2006) Phys. Rev. D, 73, p. 113005. , 2006PhRvD.73k3005B arXiv:hep-ph/0603238Adamovich, M.I., (2003) Eur. Phys. J. C, 26, p. 357. , 10.1140/epjc/s2002-01073-6 2003EPJC.26.357WA. Blanco-Covarrubias, et al. (SELEX Collaboration), in preparatio

    Do Spatial Designs Outperform Classic Experimental Designs?.

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    Controlling spatial variation in agricultural field trials is the most important step to compare treatments efficiently and accurately. Spatial variability can be controlled at the experimental design level with the assignment of treatments to experimental units and at the modeling level with the use of spatial corrections and other modeling strategies. The goal of this study was to compare the efficiency of methods used to control spatial variation in a wide range of scenarios using a simulation approach based on real wheat data. Specifically, classic and spatial experimental designs with and without a twodimensional autoregressive spatial correction were evaluated in scenarios that include differing experimental unit sizes, experiment sizes, relationships among genotypes, genotype by environment interaction levels, and trait heritabilities. Fully replicated designs outperformed partially and unreplicated designs in terms of accuracy; the alpha-lattice incomplete block design was best in all scenarios of the medium-sized experiments.However, in terms of response to selection, partially replicated experiments that evaluate large population sizes were superior in most scenarios. The AR1×AR1 spatial correction had little benefit in most scenarios except for the medium-sized experiments with the largest experimental unit size and low GE. Overall, the results from this study provide a guide to researchers designing and analyzing large field experiments. Supplementary materials accompanying this paper appear online
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