MRI/TRUS data fusion for brachytherapy

BACKGROUND: Prostate brachytherapy consists in placing radioactive seeds for tumour destruction under transrectal ultrasound imaging (TRUS) control. It requires prostate delineation from the images for dose planning. Because ultrasound imaging is patient- and operator-dependent, we have proposed to fuse MRI data to TRUS data to make image processing more reliable. The technical accuracy of this approach has already been evaluated. METHODS: We present work in progress concerning the evaluation of the approach from the dosimetry viewpoint. The objective is to determine what impact this system may have on the treatment of the patient. Dose planning is performed from initial TRUS prostate contours and evaluated on contours modified by data fusion. RESULTS: For the eight patients included, we demonstrate that TRUS prostate volume is most often underestimated and that dose is overestimated in a correlated way. However, dose constraints are still verified for those eight patients. CONCLUSIONS: This confirms our initial hypothesis

Impact of sheep grazing on juvenile sea bass, Dicentrarchus labrax L., in tidal salt marshes

The diet of young of the year sea bass, Dicentrarchus labrax L., from sheep grazed and ungrazed tidal salt marshes were com-pared qualitatively and quantitatively in Mont Saint-Michel Bay. In areas without grazing pressure, the vegetation gradient changes from a pioneer Puccinellia maritima dominated community at the tidal ¯at boundaries through a Atriplex portulacoides dominated community in the middle of the marsh to a mature Elymus pungens dominated community at the landward edge. The A. portula-coides community is highly productive and provides important quantities of litter which provides a habitat and good supply to substain high densities of the detrivorous amphipod Orchestia gammarellus. In the grazed areas, the vegetation is replaced by P. maritima communities, a low productive grass plant, and food availability and habitat suitability are reduced for O. gammarellus. Juvenile sea bass colonise the salt marsh at ¯ood during 43% of the spring tides which inundate the salt marsh creeks. They forage inside the marsh and feed mainly on O. gammarellus in the ungrazed marshes. In grazed areas, this amphipod is replaced by other species and juvenile sea bass consume less food from the marsh. This illustrates a direct effect of a terrestrial herbivore on a coastal food web, and suggests that management of salt marsh is complex and promotion of one component of their biota could involve reductions in other species

Assessment of a percutaneous iliosacral screw insertion simulator.

International audienceBACKGROUND: Navigational simulator use for specialized training purposes is rather uncommon in orthopaedic and trauma surgery. However, it reveals providing a valuable tool to train orthopaedic surgeons and help them to plan complex surgical procedures. PURPOSE: This work's objective was to assess educational efficiency of a path simulator under fluoroscopic guidance applied to sacroiliac joint percutaneous screw fixation. MATERIALS AND METHODS: We evaluated 23 surgeons' accuracy inserting a guide-wire in a human cadaver experiment, following a pre-established procedure. These medical trainees were defined in three prospective respects: novice or skilled; with or without theoretical knowledge; with or without surgical procedure familiarity. Analysed criteria for each tested surgeon included the number of intraoperative X-rays taken in order to achieve the surgical procedure as well as an iatrogenic index reflecting the surgeon's ability to detect any hazardous trajectory at the time of performing said procedure. RESULTS: An average number of 13 X-rays was required for wire implantation by the G1 group. G2 group, assisted by the simulator use, required an average of 10 X-rays. A substantial difference was especially observed within the novice sub-group (N), with an average of 12.75 X-rays for the G1 category and an average of 8.5 X-rays for the G2 category. As far as the iatrogenic index is concerned, we were unable to observe any significant difference between the groups

Composition of fish communities in macrotidal salt marshes of the Mont Saint-Michel bay (France)

At least 100 fish species are known to be present in the intertidal areas (estuaries, mudflats and salt marshes) of Mont Saint-Michel Bay. These and other comparable shallow marine coastal waters, such as estuaries and lagoons, play a nursery role for many fish species. However, in Europe little attention has been paid to the value of tidal salt marshes for fishes. Between March 1996 and April 1999, 120 tides were sampled in a tidal creek. A total of 31 species were caught. This community was largely dominated by mullets (Liza ramada represent 87% of the total biomass) and sand gobies(Pomatoschistus minutus and P. lozanoi represent 82% of the total numbers). These species and also Gasterosteus aculeatus, Syngnathus rostellatus, Dicentrarchus labrax, Mugil spp., Liza aurata and Sprattus sprattus were the most frequent species (>50% of monthly frequency of occurrence). In Europe, salt marshes and their creeks are flooded only during high spring tides. So, fishes only invade this environment during short immersion periods, and no species can be considered as marsh resident. But, the salt marsh was colonized by fish every time the tide reached the creek, and during the short time of flood, dominant fishes fed actively and exploited the high productivity. Nevertheless, this study shows that there is little interannual variation in the fish community and there are three ‘ seasons ’ in the fish fauna of the marsh. Marine straggler and marine estuarine dependent species colonize marshes between spring (recruitment period in the bay) and autumn before returning into deeper adjacent waters. Estuarine fishes are present all year round with maximum abundances in the end of summer. The presence of fishes confirms that this kind of wetland plays an important trophic and nursery role for these species. Differences in densities and stages distribution of these species into Mont Saint-Michel systems (tidal mudflats, estuaries and tidal salt marshes) can reduce the trophic competition

Decontamination of 16S rRNA gene amplicon sequence datasets based on bacterial load assessment by qPCR

Identification of unexpected taxa in 16S rRNA surveys of low-density microbiota, diluted mock communities and cultures demonstrated that a variable fraction of sequence reads originated from exogenous DNA. The sources of these contaminants are reagents used in DNA extraction, PCR, and next-generation sequencing library preparation, and human (skin, oral and respiratory) microbiota from the investigators

Shape analysis and hand preshaping for grasping

Observations of human grasping show two phases. During the reaching phase of grasping, the hand preshapes in order to prepare for the second phases which is shape-matching with the object. Planning of grasping with dextrous robot hands cannot be summarized to these two phases. It is necessary to split the grasping process into several phases (frequently overlapped), and to consider problems such as object recognition, planning accessibility, task planning, initial touch and grab phase, and stable grasp phase. These are consciously or unconsciously generated by a human being. A major issue is to integrate a part of these components in preshaping, and in particular in automatic planning accessibility and preshaping of objects to be grasped. The system is based on 2D analysis of slices extracted from an octree representation of objects