Indications of strong adaptive population genetic structure in albacore tuna (Thunnus alalunga) in the southwest and central Pacific Ocean

Albacore tuna (Thunnus alalunga) has a distinctly complex life history in which juveniles and adults separate geographically but at times inhabit the same spaces sequentially. The species also migrates long distances and presumably experiences varied regimes of physical stress over a lifetime. There are, therefore, many opportunities for population structure to arise based on stochastic differences or environmental factors that promote local adaptation. However, with the extent of mobility consistently demonstrated by tagged individuals, there is also a strong argument for panmixia within an ocean basin. It is important to confirm such assumptions from a population genetics standpoint for this species in particular because albacore is one of the principal market tuna species that sustains massive global fisheries and yet is also a slow‐growing temperate tuna. Consequently, we used 1,837 neutral SNP loci and 89 loci under potential selection to analyze population genetic structure among five sample groups collected from the western and central South Pacific. We found no evidence to challenge panmixia at neutral loci, but strong indications of structuring at adaptive loci. One population sample, from French Polynesia in 2004, was particularly differentiated. Unfortunately, the current study cannot infer whether the divergence is geographic or temporal, or possibly caused by sample distribution. We encourage future studies to include potentially adaptive loci and to continue fine scale observations within an ocean basin, and not to assume genome‐wide panmixia

Target strength of skipjack tuna (Katsuwanus pelamis) associated with fish aggregating devices (FADs)

[EN] This paper presents measures of target strength (TS; dB re 1 m(2)) and models of TS vs. fork length (L; cm), i.e. TS = 20log(L) + b(20), for skip-jack tuna associated with fish aggregating devices (FADs) in the Central Pacific Ocean. Measurements were made using 38-, 120-, and 200-kHz split-beam echosounders on a purse-seine workboat during fishing operations. To mitigate potential bias due to unresolved targets, TS measurements were rejected if they were not simultaneously detected with multiple echosounder frequencies in approximately the same location. The filtered TS and concomitantly sampled L data were used to estimate b(20) = -76, -71, and -70.5 dB for 38, 120, and 200 kHz, respectively, using the method of least squares. For comparison, quasi-independent estimates of TS and b(20) were calculated from acoustic echo-integration and catch data representing entire aggregations around the FADs. The results differed by <= 1 dB for all three frequencies. The sensitivities of these results to variations in fish morphology and behaviour were explored using a simulation of TS for fish without swimbladders. The utility of the results on acoustic properties of skipjack tuna and next research steps to achieve selective fishing at FADs are discussed.We thank the following organizations and people for their support of this work: the governments of Kiribati, Tuvalu, and Tokelau which permitted this research in their EEZs; Albacora for allowing this work aboard F/V ALBATUN TRES; Fishing Master Euken Mujika; the captain and crew; the scientists and divers J. Filmalter and F. Forget are thanked for invaluable insight about fish behaviour, vertical stratification and non-target species composition at FADs; Hector Pena for providing instruction on the sonar setup and analysis; Yolanda Lacalle for the illustration in Figure 2; and Andres Uriarte for advice concerning transmission of statistical errors. The research reported in the present document was funded by the International Seafood Sustainability Foundation (ISSF) and conducted independently by the authors. The report and its results, professional opinions and conclusions are solely the work of the authors. This paper is contribution 843 from AZTI (Marine or Food Research).Boyra, G..; Moreno, G.; Sobradillo, B.; Pérez Arjona, I.; Sancristóbal, I.; Demer, D. (2018). Target strength of skipjack tuna (Katsuwanus pelamis) associated with fish aggregating devices (FADs). ICES Journal of Marine Science. 75(5):1790-1802. https://doi.org/10.1093/icesjms/fsy041S1790180275