Distribution and habitat connectivity of large carnivores in Sub-Saharan Africa and human-carnivore conflicts in Western Ethiopia

Large carnivores are threatened with habitat fragmentation, prey depletion, and human-carnivore conflicts. Africa has an intact guild of large carnivores but data on their distribution and status are scare. Since large carnivores exist in low densities across large home ranges, traditional mammal survey techniques are impractical. I used a predictive modeling approach to estimate the potential distribution and connectivity between suitable patches for African wild dog (Lycaon pictus), cheetah (Acinonyx jubatus), leopard (Panthera pardus), and lion (P. leo) across sub-Saharan Africa. Ecological niche modeling in Maxent algorithm generated potential distributions of the four carnivores by identifying environmentally suitable conditions. All Maxent models had good predictive capabilities (AUC > 0.80, and testing omission error 88%) of the Maxent prediction. African wild dogs had the most fragmented and isolated patches, while leopards had the most intact patches. Western and central Africa appeared more fragmented, which might have been the natural state of these regions. Least-cost connectivity analysis identified 747 corridors, which could be prioritized based on different criteria. To investigate human-carnivore conflicts, I designed two local scale studies in Kafa Biosphere Reserve (KBR) and Gambella National Park (GNP), in western Ethiopia. Attitudes of local people were assessed towards lions and leopards in KBR and towards lions in GNP. Data were collected using household surveys (KBR and GNP), focus group discussions (KBR only), key informant interviews, and opportunistic informal discussions (GNP only). In Kafa, lions cause more economic damage than leopards, but lions are tolerated because they are respected in the Kafa culture. Although leopards are not given the same respect as lions, they also do not face indiscriminate killing in KBR. The data from GNP revealed that theft and disease are the leading causes of livestock loss, although respondents blame lions to be the main cause of depredation. Economic loss by lions is higher in Kafa than Gambella, but the culture of tolerance in KBR allows for the survival of lions. Participatory conservation approach, guided by Arnstein’s ladder of participation, might foster tolerance in GNP

Evolutionary Relationships of the Critically Endangered Frog \u3cem\u3eEricabatrachus baleensis\u3c/em\u3e Largen, 1991 with Notes on Incorporating Previously Unsampled Taxa into Large-scale Phylogenetic Analyses

Background: The phylogenetic relationships of many taxa remain poorly known because of a lack of appropriate data and/or analyses. Despite substantial recent advances, amphibian phylogeny remains poorly resolved in many instances. The phylogenetic relationships of the Ethiopian endemic monotypic genus Ericabatrachus has been addressed thus far only with phenotypic data and remains contentious. Results: We obtained fresh samples of the now rare and Critically Endangered Ericabatrachus baleensis and generated DNA sequences for two mitochondrial and four nuclear genes. Analyses of these new data using de novo and constrained-tree phylogenetic reconstructions strongly support a close relationship between Ericabatrachus and Petropedetes, and allow us to reject previously proposed alternative hypotheses of a close relationship with cacosternines or Phrynobatrachus. Conclusions: We discuss the implications of our results for the taxonomy, biogeography and conservation of E. baleensis, and suggest a two-tiered approach to the inclusion and analyses of new data in order to assess the phylogenetic relationships of previously unsampled taxa. Such approaches will be important in the future given the increasing availability of relevant mega-alignments and potential framework phylogenies

Long-term data for endemic frog genera reveal potential conservation crisis in the Bale Mountains, Ethiopia

Populations of many frogs have declined alarmingly in recent years, placing nearly one third of the >6,000 species under threat of extinction. Declines have been attributed largely to habitat loss, environmental degradation and/or infectious diseases such as chytridiomycosis. Many frogs undergo dramatic natural population fluctuations such that long-term data are required to determine population trends without undue influence of stochastic factors. We present long-term quantitative data (individuals encountered per person hour of searching) for four monotypic frog genera endemic to an Afromontane region of exceptional importance but growing conservation concern: one endemic to the Ethiopian highlands (Spinophrynoides osgoodi) and three endemic to the Bale Mountains (Altiphrynoides malcolmi, Balebreviceps hillmani, Ericabatrachus baleensis), collected during 15 field trips to the Bale Mountains between 1971 and 2009. Only a single confirmed sighting of S. osgoodi has been made since 1995. The other three species have also declined, at least locally. E. baleensis appears to have been extirpated at its type locality and at the same site B. hillmani has declined. These declines are in association with substantial habitat degradation caused by a growing human population. Chytrid fungus has been found on several frog species in Bale, although no dead or moribund frogs have been encountered. These results expose an urgent need for more amphibian surveys in the Bale Mountains. Additionally, we argue that detrimental human exploitation must be halted immediately in at least some parts of the Harenna Forest if a conservation crisis is to be averte

Evolutionary relationships of the Critically Endangered frog Ericabatrachus baleensis Largen, 1991 with notes on incorporating previously unsampled taxa into large-scale phylogenetic analyses

Background: The phylogenetic relationships of many taxa remain poorly known because of a lack of appropriate data and/or analyses. Despite substantial recent advances, amphibian phylogeny remains poorly resolved in many instances. The phylogenetic relationships of the Ethiopian endemic monotypic genus Ericabatrachus has been addressed thus far only with phenotypic data and remains contentious.Results: We obtained fresh samples of the now rare and Critically Endangered Ericabatrachus baleensis and generated DNA sequences for two mitochondrial and four nuclear genes. Analyses of these new data using de novo and constrained-tree phylogenetic reconstructions strongly support a close relationship between Ericabatrachus and Petropedetes, and allow us to reject previously proposed alternative hypotheses of a close relationship with cacosternines or Phrynobatrachus.Conclusions: We discuss the implications of our results for the taxonomy, biogeography and conservation of E. baleensis, and suggest a two-tiered approach to the inclusion and analyses of new data in order to assess the phylogenetic relationships of previously unsampled taxa. Such approaches will be important in the future given the increasing availability of relevant mega-alignments and potential framework phylogenies.Peer reviewedZoolog

Development and worldwide use of non-lethal, and minimal population-level impact, protocols for the isolation of amphibian chytrid fungi

T.W.J.G., M.C.F., D.S.S., A.L., E.C., F.C.C., J.B., A.A.C., C.M., F.S., B.R.S., S.O., were supported through the Biodiversa project RACE: Risk Assessment of Chytridiomycosis to European Amphibian Biodiversity (NERC standard grant NE/K014455/1 and NE/E006701/1; ANR-08-BDVA-002-03). M.C.F., J.S., C.W., P.G. were supported by the Leverhulme Trust (RPG-2014-273), M.C.F., A.C., C.W. were supported by the Morris Animal Foundation. J.V. was supported by the Bolyai János Research Grant of the Hunagrian Academy of Sciences (BO/00597/14). F.G. and D.G. were supported by the Conservation Leadership Programme Future Conservationist Award. C.S.A. was supported by Fondecyt (No. 1181758). M.C.F. and A.C. were supported by. Mohamed bin Zayed Species Conservation Fund Project (152510704). GMR held a doctoral scholarship (SFRH/BD/69194/2010) from Fundação para a Ciência e a Tecnologia. L.F.T., C.L., L.P.R. K.R.Z., T.Y.J., T.S.J. were supported by São Paulo Research Foundation (FAPESP #2016/25358-3), the National Counsel of Technological and Scientific Development (CNPq #300896/2016–6) and a Catalyzing New International Collaborations grant from the United States NSF (OISE-1159513). C.S.A. was supported by Fondecyt (No. 1181758). T.M.D. was supported by the Royal Geographical Society and the Royal Zoological Society of Scotland. B.W. was supported by the National Research Foundation of Korea (2015R1D1A1A01057282).Peer reviewedPublisher PD

Development and worldwide use of non-lethal, and minimal population-level impact, protocols for the isolation of amphibian chytrid fungi

© The Author(s) 2018.Parasitic chytrid fungi have emerged as a significant threat to amphibian species worldwide, necessitating the development of techniques to isolate these pathogens into culture for research purposes. However, early methods of isolating chytrids from their hosts relied on killing amphibians. We modified a pre-existing protocol for isolating chytrids from infected animals to use toe clips and biopsies from toe webbing rather than euthanizing hosts, and distributed the protocol to researchers as part of the BiodivERsA project RACE; here called the RML protocol. In tandem, we developed a lethal procedure for isolating chytrids from tadpole mouthparts. Reviewing a database of use a decade after their inception, we find that these methods have been applied across 5 continents, 23 countries and in 62 amphibian species. Isolation of chytrids by the non-lethal RML protocol occured in 18% of attempts with 207 fungal isolates and three species of chytrid being recovered. Isolation of chytrids from tadpoles occured in 43% of attempts with 334 fungal isolates of one species (Batrachochytrium dendrobatidis) being recovered. Together, these methods have resulted in a significant reduction and refinement of our use of threatened amphibian species and have improved our ability to work with this group of emerging pathogens.T.W.J.G., M.C.F., D.S.S., A.L., E.C., F.C.C., J.B., A.A.C., C.M., F.S., B.R.S., S.O., were supported through the Biodiversa project RACE: Risk Assessment of Chytridiomycosis to European Amphibian Biodiversity (NERC standard grant NE/K014455/1 and NE/E006701/1; ANR-08-BDVA-002-03). M.C.F., J.S., C.W., P.G. were supported by the Leverhulme Trust (RPG-2014-273), M.C.F., A.C., C.W. were supported by the Morris Animal Foundation. J.V. was supported by the Bolyai János Research Grant of the Hunagrian Academy of Sciences (BO/00597/14). F.G. and D.G. were supported by the Conservation Leadership Programme Future Conservationist Award. C.S.A. was supported by Fondecyt (No. 1181758). M.C.F. and A.C. were supported by. Mohamed bin Zayed Species Conservation Fund Project (152510704). GMR held a doctoral scholarship (SFRH/ BD/69194/2010) from Fundação para a Ciência e a Tecnologia. L.F.T., C.L., L.P.R. K.R.Z., T.Y.J., T.S.J. were supported by São Paulo Research Foundation (FAPESP #2016/25358-3), the National Counsel of Technological and Scientifc Development (CNPq #300896/2016–6) and a Catalyzing New International Collaborations grant from the United States NSF (OISE-1159513). C.S.A. was supported by Fondecyt (No. 1181758). T.M.D. was supported by the Royal Geographical Society and the Royal Zoological Society of Scotland. B.W. was supported by the National Research Foundation of Korea (2015R1D1A1A01057282).Peer Reviewe

Beyond the numbers: Human attitudes and conflict with lions (Panthera leo) in and around Gambella National Park, Ethiopia.

Human-lion conflict is one of the leading threats to lion populations and while livestock loss is a source of conflict, the degree to which livestock depredation is tolerated by people varies between regions and across cultures. Knowledge of local attitudes towards lions and identification of drivers of human-lion conflict can help formulate mitigation measures aimed at promoting coexistence of humans with lions. We assessed locals' attitudes towards lions in and around Gambella National Park and compared the findings with published data from Kafa Biosphere Reserve, both in western Ethiopia. We used household interviews to quantify livestock loss. We found that depredation was relatively low and that disease and theft were the top factors of livestock loss. Remarkably, however, tolerance of lions was lower around Gambella National Park than in Kafa Biosphere Reserve. Multivariate analysis revealed that education level, number of livestock per household, livestock loss due to depredation, and livestock loss due to theft were strong predictors of locals' attitude towards lion population growth and conservation. We show that the amount of livestock depredation alone is not sufficient to understand human-lion conflicts and we highlight the importance of accounting for cultural differences in lion conservation. The low cultural value of lions in the Gambella region corroborate the findings of our study. In combination with growing human population and land-use change pressures, low cultural value poses serious challenges to long-term lion conservation in the Gambella region. We recommend using Arnstein's ladder of participation in conservation education programs to move towards proactive involvement of locals in conservation

First record of white-eared kob (kobus kob leucotis) in Omo National Park, Ethiopia (artiodactyla, bovidae)

White-eared Kob, Kobus kob leucotis, Lichtenstein & Peters, 1853, is known to occur in the Gambela-Boma landscape in western Ethiopia and South Sudan. They live in herds and are generally found near water, in such places as plains, woodlands, swamps, and flood plains. We deployed 36 camera traps in Omo National Park and one of them took two images of a White-eared Kob. This is the first documentation from Omo National Park and showing that its range extends further to Omo than previously known and, therefore, the entire area (Gambella to Omo) can be considered as a range extension