Crop Updates 2010 - Genetically Modified Crops, Nutrition and Soils

GENETICALLY MODIFIED CROPS 1. Evaluation of the environmental and economic impact of Roundup Ready® canola in the Western Australian crop production system, James Fisher and Désirée Futures, York, Western Australia, Peter Tozer, PRT Consulting, Armidale NSW 2. Controlling wild radish (Raphanus raphanistrum) in Roundup Ready®1 Canola: Outcomes from the Nufarm 2009 Roundup Ready small plot trial Program, Mike Jackson, Nufarm Australia Limited 3. Weed strategies for glyphosate tolerant crops, John Moore, Department of Agriculture and Food 4. Results of the 2009 Western Australia Roundup Ready® canola trials, Dr James Neilsen, Canola Systems Specialist, Monsanto Australia NUTRITION 5. Modelling P runoff losses from agricultural systems, Geoff Anderson1, Wen Chen1, 2, Richard Bell2 and Ross Brennan1, 1Department of Agriculture and Food, 2School of Environmental Science, Murdoch University 6. Evaluation of deep banded biochars or biochar-mineral complex for increasing wheat yield or replacing fertiliser, Paul Blackwell, Allan Herbert and Stephen Davies, Department of Agriculture and Food 7. Improving fertiliser management: Redefining soil test-crop response relationships for canola in Western Australia, Wen Chen1, 2, Ross Brennan2, Richard Bell1, Mike Bolland2 and Geoff Anderson2, 1School of Environmental Science, Murdoch University, 2Department of Agriculture and Food 8. Phosphorus placement for wheat and lupins in WA cropping systems, 1School of Environmental Science, Murdoch University, 2Department of Agriculture and Food 9. The benefits of fertilising pastures for following crops, James Easton, Ryan Guthrie and Rowan Maddern, CSBP 10. Good nutrition produces high quality wheat in the high rainfall zone of Western Australia, Darren Hughes, Adveco Fertilisers; Wagga Wagga, Robert Belford, Curtin University of Technology, Wal Anderson, Department of Agriculture and Food, and Ian Edwards, Edstar Genetics, Perth 11. Lime to get maximum benefit from soil phosphorus, Reg Lunt and Bill Bowden, Department of Agriculture and Food 12. Variable rate top up N – Is it worth the trouble? Nigel Metz, South East Premium Wheat Growers Association (SEPWA) SOILS 13. Impact of soil inversion, soil dilution and claying on non-wetting sandplain soils, Stephen Davies, Peter Newman and Breanne Best, Department of Agriculture and Food 14. Long term effects of lime application on soil p, crop yields and annual ryegrass competition, Chris Gazey, Department of Agriculture and Food, Joel Andrew, Precision SoilTech, Belmont, Western Australi

Some New Results on Complex-Temperature Singularities in Potts Models on the Square Lattice

We report some new results on the complex-temperature (CT) singularities of $q$-state Potts models on the square lattice. We concentrate on the problematic region $Re(a) < 0$ (where $a=e^K$) in which CT zeros of the partition function are sensitive to finite lattice artifacts. From analyses of low-temperature series expansions for $3 \le q \le 8$, we establish the existence, in this region, of complex-conjugate CT singularities at which the magnetization and susceptibility diverge. From calculations of zeros of the partition function, we obtain evidence consistent with the inference that these singularities occur at endpoints $a_e, \ a_e^*$ of arcs protruding into the (complex-temperature extension of the) FM phase. Exponents for these singularities are determined; e.g., for $q=3$, we find $\beta_e=-0.125(1)$, consistent with $\beta_e=-1/8$. By duality, these results also imply associated arcs extending to the (CT extension of the) symmetric PM phase. Analytic expressions are suggested for the positions of some of these singularities; e.g., for $q=5$, our finding is consistent with the exact value $a_e,a_e^*=2(-1 \mp i)$. Further discussions of complex-temperature phase diagrams are given.Comment: 26 pages, latex, with eight epsf figure

Earthquakes: from chemical alteration to mechanical rupture

In the standard rebound theory of earthquakes, elastic deformation energy is progressively stored in the crust until a threshold is reached at which it is suddenly released in an earthquake. We review three important paradoxes, the strain paradox, the stress paradox and the heat flow paradox, that are difficult to account for in this picture, either individually or when taken together. Resolutions of these paradoxes usually call for additional assumptions on the nature of the rupture process (such as novel modes of deformations and ruptures) prior to and/or during an earthquake, on the nature of the fault and on the effect of trapped fluids within the crust at seismogenic depths. We review the evidence for the essential importance of water and its interaction with the modes of deformations. Water is usually seen to have mainly the mechanical effect of decreasing the normal lithostatic stress in the fault core on one hand and to weaken rock materials via hydrolytic weakening and stress corrosion on the other hand. We also review the evidences that water plays a major role in the alteration of minerals subjected to finite strains into other structures in out-of-equilibrium conditions. This suggests novel exciting routes to understand what is an earthquake, that requires to develop a truly multidisciplinary approach involving mineral chemistry, geology, rupture mechanics and statistical physics.Comment: 44 pages, 1 figures, submitted to Physics Report

Signal Grass (Brachiaria decumbens) Toxicity in Grazing Ruminants

Signal grass (Brachiaria decumbens) is a highly productive tropical grass that is widespread through South America, Australia, Indonesia, Vanuatu and Malaysia due to its adaptation to a wide range of soil types and environments. Animal production from these B. decumbens pastures is highly variable due to sporadic outbreaks of photosensitisation associated with low growth rates of young animals, anorexia and wasting. The identification of B. decumbens toxicity through clinical signs may grossly underestimate the impact and severity of the disease. Affected animals without clinical signs have elevated serum liver enzyme concentrations resulting from blockage of the bile ducts by birefringent crystals, identified as calcium salts of steroidal saponins found in leaves and stems. The concentrations of the steroidal saponins vary through the year and within the plant. Young, green leaves contain 5–10 times the saponin concentration of mature leaves indicating that B. decumbens pastures are likely to be more toxic during sprouting and early growth. Previous exposure, selective grazing, and avoiding toxic leaves may partly explain apparent resistance of some animals to B. decumbens toxicity. Further research is needed to define growing conditions that produce elevated saponin levels and to investigate the impact of B. decumbens on rumen function

Sotigalimab and/or nivolumab with chemotherapy in first-line metastatic pancreatic cancer: clinical and immunologic analyses from the randomized phase 2 PRINCE trial

Chemotherapy combined with immunotherapy has improved the treatment of certain solid tumors, but effective regimens remain elusive for pancreatic ductal adenocarcinoma (PDAC). We conducted a randomized phase 2 trial evaluating the efficacy of nivolumab (nivo; anti-PD-1) and/or sotigalimab (sotiga; CD40 agonistic antibody) with gemcitabine/nab-paclitaxel (chemotherapy) in patients with first-line metastatic PDAC (NCT03214250). In 105 patients analyzed for efficacy, the primary endpoint of 1-year overall survival (OS) was met for nivo/chemo (57.7%, P = 0.006 compared to historical 1-year OS of 35%, n = 34) but was not met for sotiga/chemo (48.1%, P = 0.062, n = 36) or sotiga/nivo/chemo (41.3%, P = 0.223, n = 35). Secondary endpoints were progression-free survival, objective response rate, disease control rate, duration of response and safety. Treatment-related adverse event rates were similar across arms. Multi-omic circulating and tumor biomarker analyses identified distinct immune signatures associated with survival for nivo/chemo and sotiga/chemo. Survival after nivo/chemo correlated with a less suppressive tumor microenvironment and higher numbers of activated, antigen-experienced circulating T cells at baseline. Survival after sotiga/chemo correlated with greater intratumoral CD4 T cell infiltration and circulating differentiated CD4 T cells and antigen-presenting cells. A patient subset benefitting from sotiga/nivo/chemo was not identified. Collectively, these analyses suggest potential treatment-specific correlates of efficacy and may enable biomarker-selected patient populations in subsequent PDAC chemoimmunotherapy trials

No Intra-Locus Sexual Conflict over Reproductive Fitness or Ageing in Field Crickets

Differences in the ways in which males and females maximize evolutionary fitness can lead to intra-locus sexual conflict in which genes delivering fitness benefits to one sex are costly when expressed in the other. Trade-offs between current reproductive effort and future reproduction and survival are fundamental to the evolutionary biology of ageing. This leads to the prediction that sex differences in the optimization of age-dependent reproductive effort may generate intra-locus sexual conflict over ageing rates. Here we test for intra-locus sexual conflict over age-dependent reproductive effort and longevity in the black field cricket, Teleogryllus commodus. Using a half-sib breeding design, we show that the most important components of male and female reproductive effort (male calling effort and the number of eggs laid by females) were positively genetically correlated, especially in early adulthood. However, the genetic relationships between longevity and reproductive effort were different for males and females, leading to low genetic covariation between male and female longevity. The apparent absence of intra-locus sexual conflict over ageing suggests that male and female longevity can evolve largely independently of one another

A Rapid, Strong, and Convergent Genetic Response to Urban Habitat Fragmentation in Four Divergent and Widespread Vertebrates

Urbanization is a major cause of habitat fragmentation worldwide. Ecological and conservation theory predicts many potential impacts of habitat fragmentation on natural populations, including genetic impacts. Habitat fragmentation by urbanization causes populations of animals and plants to be isolated in patches of suitable habitat that are surrounded by non-native vegetation or severely altered vegetation, asphalt, concrete, and human structures. This can lead to genetic divergence between patches and in turn to decreased genetic diversity within patches through genetic drift and inbreeding.We examined population genetic patterns using microsatellites in four common vertebrate species, three lizards and one bird, in highly fragmented urban southern California. Despite significant phylogenetic, ecological, and mobility differences between these species, all four showed similar and significant reductions in gene flow over relatively short geographic and temporal scales. For all four species, the greatest genetic divergence was found where development was oldest and most intensive. All four animals also showed significant reduction in gene flow associated with intervening roads and freeways, the degree of patch isolation, and the time since isolation.Despite wide acceptance of the idea in principle, evidence of significant population genetic changes associated with fragmentation at small spatial and temporal scales has been rare, even in smaller terrestrial vertebrates, and especially for birds. Given the striking pattern of similar and rapid effects across four common and widespread species, including a volant bird, intense urbanization may represent the most severe form of fragmentation, with minimal effective movement through the urban matrix

Fundamental Reform of Payment for Adult Primary Care: Comprehensive Payment for Comprehensive Care

Primary care is essential to the effective and efficient functioning of health care delivery systems, yet there is an impending crisis in the field due in part to a dysfunctional payment system. We present a fundamentally new model of payment for primary care, replacing encounter-based imbursement with comprehensive payment for comprehensive care. Unlike former iterations of primary care capitation (which simply bundled inadequate fee-for-service payments), our comprehensive payment model represents new investment in adult primary care, with substantial increases in payment over current levels. The comprehensive payment is directed to practices to include support for the modern systems and teams essential to the delivery of comprehensive, coordinated care. Income to primary physicians is increased commensurate with the high level of responsibility expected. To ensure optimal allocation of resources and the rewarding of desired outcomes, the comprehensive payment is needs/risk-adjusted and performance-based. Our model establishes a new social contract with the primary care community, substantially increasing payment in return for achieving important societal health system goals, including improved accessibility, quality, safety, and efficiency. Attainment of these goals should help offset and justify the costs of the investment. Field tests of this and other new models of payment for primary care are urgently needed