4,116 research outputs found

    Grease to the wheel or a spanner in the works? An investigation of office and industrial occupier displacement and property market filtering in Tyne & Wear using the chaining technique

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    The research uses a chaining technique to study the scale and impact of the displacement of office and industrial occupiers in the Tyne and Wear conurbation. The status and origin of occupiers of 20 office and industrial developments, promoted or assisted by the public sector, have been recorded to determine the distance that they have moved and the number of net new jobs generated. Property chaining reveals the extent to which the filtering effect has resulted in reoccupation of buildings and permits the quantification of the amount of property remaining vacant and its location. Analysis of the recorded chains has revealed that more than half of all occupiers on assisted schemes have relocated within the Tyne and Wear area and one in three occupier chains generated by such relocations result in vacant property elsewhere within the metropolitan area. The displacement of employment and economic activity within the conurbation can be mapped and could be used to inform the action of public agencies to reduce or ameliorate the negative side-effects of their intervention. The chaining technique proves an elegantly simple and robust technique by which to determine the scale and distribution of occupier displacement in property markets

    Florida Coral Reef Damage from Nuclear Submarine Grounding and Proposed Restoration

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    The United States submarine Memphis grounded in approximately 10 m water depth on a tropical coral reef ofT southeast Florida in February, 1993. The grounding caused extensive physical and biological damage to the reef substrate and to the coral community. As part of a claim by the State of Florida against the United States, the impact of the grounding was assessed, and the area of damage was determined through field and photographic studies. A recovery rate for the reef was assigned from literature estimates. The NOAA Habitat Equivalency Model (HEM) was used to calculate the reef area needed to be replaced in order to compensate for damages. A plan devised to restore the reef included: removal of loose rubble generated from the grounding; stabilization of reef faces in danger of collapse: emplacement of six different types of artificial reefs; transplantation of reef-building corals (15% of the number damaged) to bare damaged substrate and to the artificial reefs; and a 20 year monitoring period to assess restoration plan efficacy. Settlement of the claim in April, 1997 resulted in an award of $750,000 to the Ecosystem Management Trust Fund of the State of Florida. Utilization of this fund necessitates a revised plan to restore the damaged reef within economic constraints. This plan will involve rubble removal/stabilization, artificial reef emplacement, stony coral transplantation, and monitoring

    Oligomeric State of β-Coronavirus Non-Structural Protein 10 Stimulators Studied by Small Angle X-ray Scattering

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    The β-coronavirus family, encompassing Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), Severe Acute Respiratory Syndrome Coronavirus (SARS), and Middle East Respiratory Syndrome Coronavirus (MERS), has triggered pandemics within the last two decades. With the possibility of future pandemics, studying the coronavirus family members is necessary to improve knowledge and treatment. These viruses possess 16 non-structural proteins, many of which play crucial roles in viral replication and in other vital functions. One such vital protein is non-structural protein 10 (nsp10), acting as a pivotal stimulator of nsp14 and nsp16, thereby influencing RNA proofreading and viral RNA cap formation. Studying nsp10 of pathogenic coronaviruses is central to unraveling its multifunctional roles. Our study involves the biochemical and biophysical characterisation of full-length nsp10 from MERS, SARS and SARS-CoV-2. To elucidate their oligomeric state, we employed a combination of Multi-detection Size exclusion chromatography (Multi-detection SEC) with multi-angle static light scattering (MALS) and small angle X-ray scattering (SAXS) techniques. Our findings reveal that full-length nsp10s primarily exist as monomers in solution, while truncated versions tend to oligomerise. SAXS experiments reveal a globular shape for nsp10, a trait conserved in all three coronaviruses, although MERS nsp10, diverges most from SARS and SARS-CoV-2 nsp10s. In summary, unbound nsp10 proteins from SARS, MERS, and SARS-CoV-2 exhibit a globular and predominantly monomeric state in solution

    Conformal Properties and Baecklund Transform for the Associated Camassa-Holm Equation

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    Integrable equations exhibit interesting conformal properties and can be written in terms of the so-called conformal invariants. The most basic and important example is the KdV equation and the corresponding Schwarz-KdV equation. Other examples, including the Camassa-Holm equation and the associated Camassa-Holm equation are investigated in this paper. It is shown that the Baecklund transform is related to the conformal properties of these equations. Some particular solutions of the Associated Camassa-Holm Equation are discussed also.Comment: 13 pages, 1 figure. Physics Letters A (accepted

    Investigation of Quantum Phase Transitions using Multi-target DMRG Methods

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    In this paper we examine how the predictions of conformal invariance can be widely exploited to overcome the difficulties of the density-matrix renormalization group near quantum critical points. The main idea is to match the set of low-lying energy levels of the lattice Hamiltonian, as a function of the system's size, with the spectrum expected for a given conformal field theory in two dimensions. As in previous studies this procedure requires an accurate targeting of various excited states. Here we discuss how this can be achieved within the DMRG algorithm by means of the recently proposed Thick-restart Lanczos method. As a nontrivial benchmark we use an anisotropic spin-1 Hamiltonian with special attention to the transitions from the Haldane phase. Nonetheless, we think that this procedure could be generally valid in the study of quantum critical phenomena.Comment: 14 pages, LaTeX2e (svjour class), 8 EPS figures. Same version as the published one, with new references and English corrections of the proofreade

    Identification of fragments binding to SARS-CoV-2 nsp10 reveals ligand-binding sites in conserved interfaces between nsp10 and nsp14/nsp16

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    Since the emergence of SARS-CoV-2 in 2019, Covid-19 has developed into a serious threat to our health, social and economic systems. Although vaccines have been developed in a tour-de-force and are now increasingly available, repurposing of existing drugs has been less successful. There is a clear need to develop new drugs against SARS-CoV-2 that can also be used against future coronavirus infections. Non-structural protein 10 (nsp10) is a conserved stimulator of two enzymes crucial for viral replication, nsp14 and nsp16, exhibiting exoribonuclease and methyltransferase activities. Interfering with RNA proofreading or RNA cap formation represents intervention strategies to inhibit replication. We applied fragment-based screening using nano differential scanning fluorometry and X-ray crystallography to identify ligands targeting SARS-CoV-2 nsp10. We identified four fragments located in two distinct sites: one can be modelled to where it would be located in the nsp14–nsp10 complex interface and the other in the nsp16–nsp10 complex interface. Microscale thermophoresis (MST) experiments were used to quantify fragment affinities for nsp10. Additionally, we showed by MST that the interaction by nsp14 and 10 is weak and thereby that complex formation could be disrupted by small molecules. The fragments will serve as starting points for the development of more potent analogues using fragment growing techniques and structure-based drug design

    The Interplay between Chemistry and Mechanics in the Transduction of a Mechanical Signal into a Biochemical Function

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    There are many processes in biology in which mechanical forces are generated. Force-bearing networks can transduce locally developed mechanical signals very extensively over different parts of the cell or tissues. In this article we conduct an overview of this kind of mechanical transduction, focusing in particular on the multiple layers of complexity displayed by the mechanisms that control and trigger the conversion of a mechanical signal into a biochemical function. Single molecule methodologies, through their capability to introduce the force in studies of biological processes in which mechanical stresses are developed, are unveiling subtle intertwining mechanisms between chemistry and mechanics and in particular are revealing how chemistry can control mechanics. The possibility that chemistry interplays with mechanics should be always considered in biochemical studies.Comment: 50 pages, 18 figure

    Magnetization steps in a diluted Heisenberg antiferromagnetic chain: Theory and experiments on TMMC:Cd

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    A theory for the equilibrium low-temperature magnetization M of a diluted Heisenberg antiferromagnetic chain is presented. The magnetization curve, M versus B, is calculated using the exact contributions of finite chains with 1 to 5 spins, and the "rise and ramp approximation" for longer chains. Some non-equilibrium effects that occur in a rapidly changing B, are also considered. Specific non-equilibrium models based on earlier treatments of the phonon bottleneck, and of spin flips associated with cross relaxation and with level crossings, are discussed. Magnetization data on powders of TMMC diluted with cadmium [i.e., (CH_3)_4NMn_xCd_(1-x)Cl_3, with 0.16<=x<=0.50 were measured at 0.55 K in 18 T superconducting magnets. The field B_1 at the first MST from pairs is used to determine the NN exchange constant, J, which changes from -5.9 K to -6.5 K as x increases from 0.16 to 0.50. The magnetization curves obtained in the superconducting magnets are compared with simulations based on the equilibrium theory. Data for the differential susceptibility, dM/dB, were taken in pulsed magnetic fields (7.4 ms duration) up to 50 T, with the powder samples in a 1.5 K liquid-helium bath. Non-equilibrium effects, which became more severe as x decreased, were observed. The non-equilibrium effects are tentatively interpreted using the "Inadequate Heat Flow Scenario," or to cross-relaxation, and crossings of energy levels, including those of excited states.Comment: 16 pages, 14 figure

    Targeting of low ALK antigen density neuroblastoma using AND logic-gate engineered CAR-T cells

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    Background aims: The targeting of solid cancers with chimeric antigen receptor (CAR) T cells faces many technological hurdles, including selection of optimal target antigens. Promising pre-clinical and clinical data of CAR T-cell activity have emerged from targeting surface antigens such as GD2 and B7H3 in childhood cancer neuroblastoma. Anaplastic lymphoma kinase (ALK) is expressed in a majority of neuroblastomas at low antigen density but is largely absent from healthy tissues. / Methods: To explore an alternate target antigen for neuroblastoma CAR T-cell therapy, the authors generated and screened a single-chain variable fragment library targeting ALK extracellular domain to make a panel of new anti-ALK CAR T-cell constructs. / Results: A lead novel CAR T-cell construct was capable of specific cytotoxicity against neuroblastoma cells expressing low levels of ALK, but with only weak cytokine and proliferative T-cell responses. To explore strategies for amplifying ALK CAR T cells, the authors generated a co-CAR approach in which T cells received signal 1 from a first-generation ALK construct and signal 2 from anti-B7H3 or GD2 chimeric co-stimulatory receptors. The co-CAR approach successfully demonstrated the ability to avoid targeting single-antigen-positive targets as a strategy for mitigating on-target off-tumor toxicity. / Conclusions: These data provide further proof of concept for ALK as a neuroblastoma CAR T-cell target
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