A View from Melrose

An essay by President Vivian A. Bull: Another Linfield \u27Defining Moment.\u2

A View from Melrose

An essay by President Vivian A. Bull: Thirteen Years in Review

Floodwater farming, discontinuous ephemeral streams, and Puebloan abandonment in southwestern Colorado

Geoarchaeological study on the southern piedmont of Sleeping Ute Mountain in southwestern Colorado indicates the presence of discontinuous ephemeral streams that were the foci of episodic Puebloan occupation between A.D. 600s and 1280. Characterized by arroyos, discontinuous ephemeral streams contain alternating aggrading and degrading reaches and are well suited for ak chin floodwater agriculture. Episodic Puebloan abandonment of the southern piedmont correlates with periods of drought but does not appear to be linked to stream entrenchment. We question a priori assumptions of droughts correlated to stream entrenchment and urge caution in the use of drought-arroyo models for settlement shifts in alluvial flood plains without supporting stratigraphic or geomorphic evidence

Dynamic Evolution of Pathogenicity Revealed by Sequencing and Comparative Genomics of 19 Pseudomonas syringae Isolates

Closely related pathogens may differ dramatically in host range, but the molecular, genetic, and evolutionary basis for these differences remains unclear. In many Gram- negative bacteria, including the phytopathogen Pseudomonas syringae, type III effectors (TTEs) are essential for pathogenicity, instrumental in structuring host range, and exhibit wide diversity between strains. To capture the dynamic nature of virulence gene repertoires across P. syringae, we screened 11 diverse strains for novel TTE families and coupled this nearly saturating screen with the sequencing and assembly of 14 phylogenetically diverse isolates from a broad collection of diseased host plants. TTE repertoires vary dramatically in size and content across all P. syringae clades; surprisingly few TTEs are conserved and present in all strains. Those that are likely provide basal requirements for pathogenicity. We demonstrate that functional divergence within one conserved locus, hopM1, leads to dramatic differences in pathogenicity, and we demonstrate that phylogenetics-informed mutagenesis can be used to identify functionally critical residues of TTEs. The dynamism of the TTE repertoire is mirrored by diversity in pathways affecting the synthesis of secreted phytotoxins, highlighting the likely role of both types of virulence factors in determination of host range. We used these 14 draft genome sequences, plus five additional genome sequences previously reported, to identify the core genome for P. syringae and we compared this core to that of two closely related non-pathogenic pseudomonad species. These data revealed the recent acquisition of a 1 Mb megaplasmid by a sub-clade of cucumber pathogens. This megaplasmid encodes a type IV secretion system and a diverse set of unknown proteins, which dramatically increases both the genomic content of these strains and the pan-genome of the species

New genetic loci link adipose and insulin biology to body fat distribution.

Body fat distribution is a heritable trait and a well-established predictor of adverse metabolic outcomes, independent of overall adiposity. To increase our understanding of the genetic basis of body fat distribution and its molecular links to cardiometabolic traits, here we conduct genome-wide association meta-analyses of traits related to waist and hip circumferences in up to 224,459 individuals. We identify 49 loci (33 new) associated with waist-to-hip ratio adjusted for body mass index (BMI), and an additional 19 loci newly associated with related waist and hip circumference measures (P < 5 × 10(-8)). In total, 20 of the 49 waist-to-hip ratio adjusted for BMI loci show significant sexual dimorphism, 19 of which display a stronger effect in women. The identified loci were enriched for genes expressed in adipose tissue and for putative regulatory elements in adipocytes. Pathway analyses implicated adipogenesis, angiogenesis, transcriptional regulation and insulin resistance as processes affecting fat distribution, providing insight into potential pathophysiological mechanisms

Dr. Vivian Bull Interview

Dr. Vivian Bull was president of Linfield College from 1992-2005. During her tenure she worked to increase Linfield\u27s profile and focused on construction projects that resulted in 14 new buildings, roughly doubling the size of Linfield\u27s campus. This interview takes place in the Jereld R. Nicholson Library\u27s Austin Reading Room. Topics covered include campus construction, Title IX, diversity on campus (including gay rights), how the change of technology affected the campus and students, and her life beyond Linfield. For a shareable version of this video, please see the interview on YouTube