The Dissociation of Vibrationally Excited CH3OSO Radicals and Their Photolytic Precurson, Methoxysulfinyl Chloride

I developed a synthesis of an unstable molecule that undergoes cleavage when exposed to light. Laurie Butler, in her lab at the University of Chicago, studied the rate of decay/bond dissociation for this molecule. It serves as a model for bond dissociation processes that occur with pollutant molecules in the upper atmosphere. --author-supplied descriptio

A Molecular Precursor to Phosphaethyne and Its Application in Synthesis of the Aromatic 1,2,3,4-Phosphatriazolate Anion

Dibenzo-7-phosphanorbornadiene Ph[subscript 3]PC(H)PA (1, A = C[subscript 14]H[subscript 10], anthracene) is reported here as a molecular precursor to phosphaethyne (HC≡P), produced together with anthracene and triphenylphosphine. HCP generated by thermolysis of 1 has been observed by molecular beam mass spectrometry, laser-induced fluorescence, microwave spectroscopy, and nuclear magnetic resonance (NMR) spectroscopy. In toluene, fragmentation of 1 has been found to proceed with activation parameters of ΔH[superscript ⧧] = 25.5 kcal/mol and ΔS[superscript ⧧] = −2.43 eu and is accompanied by formation of an orange insoluble precipitate. Results from computational studies of the mechanism of HCP generation are in good agreement with experimental data. This high-temperature method of HCP generation has pointed to new reaction chemistry with azide anion to produce the 1,2,3,4-phosphatriazolate anion, HCPN3–, for which structural data have been obtained in a single-crystal X-ray diffraction study. Negative-ion photoelectron spectroscopy has shown the adiabatic detachment energy for this anion to be 3.555(10) eV. The aromaticity of HCPN[subscript 3]– has been assessed using nucleus-independent chemical shift, quantum theory of atoms in molecules, and natural bond orbital methods.National Science Foundation (U.S.) (NSF grant CHE-1362118)United States. Department of Energy (grant DE-FG0287ER13671)United States. National Aeronautics and Space Administration (NASA grant NNX13AE59G)Smithsonian Astrophysical Observatory (Harvard-Smithsonian Center for Astrophysics, CfA Postdoctoral Fellowship

Wintertime Spatial Distribution of Ammonia and its Emission Sources in the Great Salt Lake Region

Ammonium-containing aerosols are a major component of wintertime air pollution in many densely populated regions around the world. Especially in mountain basins, the formation of persistent cold-air pools (PCAPs) can enhance particulate matter with diameters less than 2.5 µm (PM2.5) to levels above air quality standards. Under these conditions, PM2.5 in the Great Salt Lake region of northern Utah has been shown to be primarily composed of ammonium nitrate; however, its formation processes and sources of its precursors are not fully understood. Hence, it is key to understanding the emission sources of its gas phase precursor, ammonia (NH3). To investigate the formation of ammonium nitrate, a suite of trace gases and aerosol composition were sampled from the NOAA Twin Otter aircraft during the Utah Winter Fine Particulate Study (UWFPS) in January and February 2017. NH3 was measured using a quantum cascade tunable infrared laser differential absorption spectrometer (QC-TILDAS), while aerosol composition, including particulate ammonium (pNH4), was measured with an aerosol mass spectrometer (AMS). The origin of the sampled air masses was investigated using the Stochastic Time-Inverted Lagrangian Transport (STILT) model and combined with an NH3 emission inventory to obtain model-predicted NHx (=NH3+pNH4) enhancements. Enhancements represent the increase in NH3 mixing ratios within the last 24 h due to emissions within the model footprint. Comparison of these NHx enhancements with measured NHx from the Twin Otter shows that modelled values are a factor of 1.6 to 4.4 lower for the three major valleys in the region. Among these, the underestimation is largest for Cache Valley, an area with intensive agricultural activities. We find that one explanation for the underestimation of wintertime emissions may be the seasonality factors applied to NH3 emissions from livestock. An investigation of inter-valley exchange revealed that transport of NH3 between major valleys was limited and PM2.5 in Salt Lake Valley (the most densely populated area in Utah) was not significantly impacted by NH3 from the agricultural areas in Cache Valley. We found that in Salt Lake Valley around two thirds of NHx originated within the valley, while about 30 % originated from mobile sources and 60 % from area source emissions in the region. For Cache Valley, a large fraction of NOx potentially leading to PM2.5 formation may not be locally emitted but mixed in from other counties

Complex refractive indices in the ultraviolet and visible spectral region for highly absorbing non-spherical biomass burning aerosol

Biomass burning aerosol is a major source of PM2.5, and significantly affects Earth's radiative budget. The magnitude of its radiative effect is poorly quantified due to uncertainty in the optical properties of aerosol formed from biomass burning. Using a broadband cavity-enhanced spectrometer with a recently increased spectral range (360&ndash;720&thinsp;nm) coupled to a size-selecting aerosol inlet, we retrieve complex refractive indices of aerosol throughout the near-ultraviolet and visible spectral region. We demonstrate refractive index retrievals for two standard aerosol samples: polystyrene latex spheres and ammonium sulfate. We then retrieve refractive indices for biomass burning aerosol from 13 controlled fires during the 2016 Missoula Fire Science Laboratory Study. We demonstrate that the technique is highly sensitive to the accuracy of the aerosol size distribution method and find that while we can constrain the optical properties of brown carbon aerosol for many fires, fresh smoke dominated by fractal-like black carbon aerosol presents unique challenges and is not well-represented by Mie theory. For the 13 fires, we show that the accuracy of Mie theory retrievals decreases as the fraction of black carbon mass increases. At 475&thinsp;nm, the average refractive index is 1.635 (&plusmn;0.056) +0.06 (&plusmn;0.12)i, and at 365&thinsp;nm, the average refractive index is 1.605 (&plusmn;0.041) +0.038 (&plusmn;0.074)i. &nbsp;</p

Nighttime and daytime dark oxidation chemistry in wildfire plumes: an observation and model analysis of FIREX-AQ aircraft data

Wildfires are increasing in size across the western US, leading to increases in human smoke exposure and associated negative health impacts. The impact of biomass burning (BB) smoke, including wildfires, on regional air quality depends on emissions, transport, and chemistry, including oxidation of emitted BB volatile organic compounds (BBVOCs) by the hydroxyl radical (OH), nitrate radical (NO3), and ozone (O3). During the daytime, when light penetrates the plumes, BBVOCs are oxidized mainly by O3 and OH. In contrast, at night or in optically dense plumes, BBVOCs are oxidized mainly by O3 and NO3. This work focuses on the transition between daytime and nighttime oxidation, which has significant implications for the formation of secondary pollutants and loss of nitrogen oxides () and has been understudied. We present wildfire plume observations made during FIREX-AQ (Fire Influence on Regional to Global Environments and Air Quality), a field campaign involving multiple aircraft, ground, satellite, and mobile platforms that took place in the United States in the summer of 2019 to study both wildfire and agricultural burning emissions and atmospheric chemistry. We use observations from two research aircraft, the NASA DC-8 and the NOAA Twin Otter, with a detailed chemical box model, including updated phenolic mechanisms, to analyze smoke sampled during midday, sunset, and nighttime. Aircraft observations suggest a range of NO3 production rates (0.1&ndash;1.5&thinsp;ppbv&thinsp;h&minus;1) in plumes transported during both midday and after dark. Modeled initial instantaneous reactivity toward BBVOCs for NO3, OH, and O3 is 80.1&thinsp;%, 87.7&thinsp;%, and 99.6&thinsp;%, respectively. Initial NO3 reactivity is 10&ndash;104 times greater than typical values in forested or urban environments, and reactions with BBVOCs account for &gt;97&thinsp;% of NO3 loss in sunlit plumes (jNO2 up to ), while conventional photochemical NO3 loss through reaction with NO and photolysis are minor pathways. Alkenes and furans are mostly oxidized by OH and O3 (11&thinsp;%&ndash;43&thinsp;%, 54&thinsp;%&ndash;88&thinsp;% for alkenes; 18&thinsp;%&ndash;55&thinsp;%, 39&thinsp;%&ndash;76&thinsp;%, for furans, respectively), but phenolic oxidation is split between NO3, O3, and OH (26&thinsp;%&ndash;52&thinsp;%, 22&thinsp;%&ndash;43&thinsp;%, 16&thinsp;%&ndash;33&thinsp;%, respectively). Nitrate radical oxidation accounts for 26&thinsp;%&ndash;52&thinsp;% of phenolic chemical loss in sunset plumes and in an optically thick plume. Nitrocatechol yields varied between 33&thinsp;% and 45&thinsp;%, and NO3 chemistry in BB plumes emitted late in the day is responsible for 72&thinsp;%&ndash;92&thinsp;% (84&thinsp;% in an optically thick midday plume) of nitrocatechol formation and controls nitrophenolic formation overall. As a result, overnight nitrophenolic formation pathways account for 56&thinsp;%&plusmn;2&thinsp;% of NOx loss by sunrise the following day. In all but one overnight plume we modeled, there was remaining NOx (13&thinsp;%&ndash;57&thinsp;%) and BBVOCs (8&thinsp;%&ndash;72&thinsp;%) at sunrise. &nbsp;</p

The genetic architecture of the human cerebral cortex

The cerebral cortex underlies our complex cognitive capabilities, yet little is known about the specific genetic loci that influence human cortical structure. To identify genetic variants that affect cortical structure, we conducted a genome-wide association meta-analysis of brain magnetic resonance imaging data from 51,665 individuals. We analyzed the surface area and average thickness of the whole cortex and 34 regions with known functional specializations. We identified 199 significant loci and found significant enrichment for loci influencing total surface area within regulatory elements that are active during prenatal cortical development, supporting the radial unit hypothesis. Loci that affect regional surface area cluster near genes in Wnt signaling pathways, which influence progenitor expansion and areal identity. Variation in cortical structure is genetically correlated with cognitive function, Parkinson's disease, insomnia, depression, neuroticism, and attention deficit hyperactivity disorder

Finishing the euchromatic sequence of the human genome

The sequence of the human genome encodes the genetic instructions for human physiology, as well as rich information about human evolution. In 2001, the International Human Genome Sequencing Consortium reported a draft sequence of the euchromatic portion of the human genome. Since then, the international collaboration has worked to convert this draft into a genome sequence with high accuracy and nearly complete coverage. Here, we report the result of this finishing process. The current genome sequence (Build 35) contains 2.85 billion nucleotides interrupted by only 341 gaps. It covers ∼99% of the euchromatic genome and is accurate to an error rate of ∼1 event per 100,000 bases. Many of the remaining euchromatic gaps are associated with segmental duplications and will require focused work with new methods. The near-complete sequence, the first for a vertebrate, greatly improves the precision of biological analyses of the human genome including studies of gene number, birth and death. Notably, the human enome seems to encode only 20,000-25,000 protein-coding genes. The genome sequence reported here should serve as a firm foundation for biomedical research in the decades ahead

Observation of the simplest Criegee intermediate CH[subscript 2]OO in the gas-phase ozonolysis of ethylene

Ozonolysis is one of the dominant oxidation pathways for tropospheric alkenes. Although numerous studies have confirmed a 1,3-cycloaddition mechanism that generates a Criegee intermediate (CI) with form R[subscript 1]R[subscript 2]COO, no small CIs have ever been directly observed in the ozonolysis of alkenes because of their high reactivity. We present the first experimental detection of CH[subscript 2]OO in the gas-phase ozonolysis of ethylene, using Fourier transform microwave spectroscopy and a modified pulsed nozzle, which combines high reactant concentrations with rapid sampling and sensitive detection. Nine other product species of the O[subscript 3] + C[subscript 2]H[subscript 4] reaction were also detected, including formaldehyde, formic acid, dioxirane, and ethylene ozonide. The presence of all these species can be attributed to the unimolecular and bimolecular reactions of CH[subscript 2]OO, and their abundances are in qualitative agreement with published mechanisms and rate constants.National Science Foundation (U.S.) (CHE-1058063)Camille & Henry Dreyfus Foundation (Postdoctoral Program in Environmental Chemistry