30 research outputs found

    Cases of Lyme Disease Appear to Follow Periodic Cycles Linked to Geography

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    We are studying the spread of Lyme disease through Wisconsin. It is important because the number of people diagnosed with Lyme Disease in the US is around 300,000, annually (CDC 2017). The CDC has collected data of reported Lyme Disease cases since 2001. When looking at the data we noticed that the trends of cases of Lyme disease followed a cyclical pattern. The cycles varied widely. We hypothesized that environmental and geographical factors could affect the main vector of Lyme Disease, Ixodes scapularis (the black-legged tick). After analyzing Lyme Disease data from the CDC and using a map making software (Paint Maps 2018), we found that geographical distribution had a marked effect on the rate at which counties cycled between up and down trends in infection rates. These findings are important because they give us more insight into possible control methods to keep the black-legged tick, and therefore Lyme Disease, at a manageable level

    Dust emission from crusted surfaces: Insights from field measurements and modelling

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    Crusted surfaces can be major sources of mineral dust emission. Quantitative understanding of dust emission from crusted surfaces is limited, because (1) theories on dust emission are not well tested for such surfaces; and (2) modelling is hampered by a lack of input data sufficient to describe the surface conditions. Combining detailed field measurements with physics-based numerical modelling, we present new insights into dust emission from crusted surfaces. Our measurements confirm that crust erodibility and dust-emission intensity can increase or decrease after previous erosion events. To support interpretation of the measurements and to test the applicability of a state-of-the-art parameterisation to simulate dust emission from crusted surfaces, we apply the dust emission scheme of Shao (2004). Saltation flux, which is input to the scheme, is approximated using the parameterisation of Kawamura (1964) and a scaling factor obtained from observations. Limitations of this approach are discussed. Our results show that the dust emission scheme is suitable to estimate dust emission from crusted surfaces if accurate input data and parameters describing the soil-surface condition are provided. The parameters were optimized for each dust event to achieve a best estimate. The variation of the resulting parameter values confirms the observed variability of dust-emission efficiency between the events and provides further evidence that it was caused by variations in crust erodibility. Our study demonstrates that available physics-based dust-emission parameterisations are able to simulate dust emissions under complicated conditions, but also that refined information on the soil-surface conditions are needed as input to the schemes.This study was funded by the German Research Foundation (Deutsche Forschungsgemeinschaft, DFG) grant KL 2932/1-1 awarded as a postdoctoral research fellowship to MK. TEG and RSVP acknowledge support from NASA grant NNX16AH13G. 15 NPW acknowledges support through funding from the Department of Interior, Bureau of Land Management. We thank Ralph Lorenz for providing pressure loggers and the Davis anemometer used on Site F. We also thank Sharalyn Peterson, Justin Van Zee, and Bradley Cooper for field and lab assistance. LPI point data were recorded using DIMA (https://jornada.nmsu.edu/monit-assess/dima). Any use of trade, product, or firm names is for descriptive purposes only and does not imply endorsement by the U.S. Government. The USDA is an equal opportunity provider and employer. We thank two anonymous reviewers for their positive and helpful comments.Peer ReviewedPostprint (author's final draft

    Ground robotic measurement of aeolian processes

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    Models of aeolian processes rely on accurate measurements of the rates of sediment transport by wind, and careful evaluation of the environmental controls of these processes. Existing field approaches typically require intensive, event-based experiments involving dense arrays of instruments. These devices are often cumbersome and logistically difficult to set up and maintain, especially near steep or vegetated dune surfaces. Significant advances in instrumentation are needed to provide the datasets that are required to validate and improve mechanistic models of aeolian sediment transport. Recent advances in robotics show great promise for assisting and amplifying scientists’ efforts to increase the spatial and temporal resolution of many environmental measurements governing sediment transport. The emergence of cheap, agile, human-scale robotic platforms endowed with increasingly sophisticated sensor and motor suites opens up the prospect of deploying programmable, reactive sensor payloads across complex terrain in the service of aeolian science. This paper surveys the need and assesses the opportunities and challenges for amassing novel, highly resolved spatiotemporal datasets for aeolian research using partially-automated ground mobility. We review the limitations of existing measurement approaches for aeolian processes, and discuss how they may be transformed by ground-based robotic platforms, using examples from our initial field experiments. We then review how the need to traverse challenging aeolian terrains and simultaneously make high-resolution measurements of critical variables requires enhanced robotic capability. Finally, we conclude with a look to the future, in which robotic platforms may operate with increasing autonomy in harsh conditions. Besides expanding the completeness of terrestrial datasets, bringing ground-based robots to the aeolian research community may lead to unexpected discoveries that generate new hypotheses to expand the science itself. For more information: Kod*lab (http://kodlab.seas.upenn.edu/

    Enhancing wind erosion monitoring and assessment for U.S. rangelands

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    Wind erosion is a major resource concern for rangeland managers because it can impact soil health, ecosystem structure and function, hydrologic processes, agricultural production, and air quality. Despite its significance, little is known about which landscapes are eroding, by how much, and when. The National Wind Erosion Research Network was established in 2014 to develop tools for monitoring and assessing wind erosion and dust emissions across the United States. The Network, currently consisting of 13 sites, creates opportunities to enhance existing rangeland soil, vegetation, and air quality monitoring programs. Decision-support tools developed by the Network will improve the prediction and management of wind erosion across rangeland ecosystems. © 2017 The Author(s)The Rangelands archives are made available by the Society for Range Management and the University of Arizona Libraries. Contact [email protected] for further information

    New genetic loci link adipose and insulin biology to body fat distribution.

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    Body fat distribution is a heritable trait and a well-established predictor of adverse metabolic outcomes, independent of overall adiposity. To increase our understanding of the genetic basis of body fat distribution and its molecular links to cardiometabolic traits, here we conduct genome-wide association meta-analyses of traits related to waist and hip circumferences in up to 224,459 individuals. We identify 49 loci (33 new) associated with waist-to-hip ratio adjusted for body mass index (BMI), and an additional 19 loci newly associated with related waist and hip circumference measures (P < 5 × 10(-8)). In total, 20 of the 49 waist-to-hip ratio adjusted for BMI loci show significant sexual dimorphism, 19 of which display a stronger effect in women. The identified loci were enriched for genes expressed in adipose tissue and for putative regulatory elements in adipocytes. Pathway analyses implicated adipogenesis, angiogenesis, transcriptional regulation and insulin resistance as processes affecting fat distribution, providing insight into potential pathophysiological mechanisms

    AI is a viable alternative to high throughput screening: a 318-target study

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    : High throughput screening (HTS) is routinely used to identify bioactive small molecules. This requires physical compounds, which limits coverage of accessible chemical space. Computational approaches combined with vast on-demand chemical libraries can access far greater chemical space, provided that the predictive accuracy is sufficient to identify useful molecules. Through the largest and most diverse virtual HTS campaign reported to date, comprising 318 individual projects, we demonstrate that our AtomNet® convolutional neural network successfully finds novel hits across every major therapeutic area and protein class. We address historical limitations of computational screening by demonstrating success for target proteins without known binders, high-quality X-ray crystal structures, or manual cherry-picking of compounds. We show that the molecules selected by the AtomNet® model are novel drug-like scaffolds rather than minor modifications to known bioactive compounds. Our empirical results suggest that computational methods can substantially replace HTS as the first step of small-molecule drug discovery

    Impact of COVID-19 on cardiovascular testing in the United States versus the rest of the world

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    Objectives: This study sought to quantify and compare the decline in volumes of cardiovascular procedures between the United States and non-US institutions during the early phase of the coronavirus disease-2019 (COVID-19) pandemic. Background: The COVID-19 pandemic has disrupted the care of many non-COVID-19 illnesses. Reductions in diagnostic cardiovascular testing around the world have led to concerns over the implications of reduced testing for cardiovascular disease (CVD) morbidity and mortality. Methods: Data were submitted to the INCAPS-COVID (International Atomic Energy Agency Non-Invasive Cardiology Protocols Study of COVID-19), a multinational registry comprising 909 institutions in 108 countries (including 155 facilities in 40 U.S. states), assessing the impact of the COVID-19 pandemic on volumes of diagnostic cardiovascular procedures. Data were obtained for April 2020 and compared with volumes of baseline procedures from March 2019. We compared laboratory characteristics, practices, and procedure volumes between U.S. and non-U.S. facilities and between U.S. geographic regions and identified factors associated with volume reduction in the United States. Results: Reductions in the volumes of procedures in the United States were similar to those in non-U.S. facilities (68% vs. 63%, respectively; p = 0.237), although U.S. facilities reported greater reductions in invasive coronary angiography (69% vs. 53%, respectively; p < 0.001). Significantly more U.S. facilities reported increased use of telehealth and patient screening measures than non-U.S. facilities, such as temperature checks, symptom screenings, and COVID-19 testing. Reductions in volumes of procedures differed between U.S. regions, with larger declines observed in the Northeast (76%) and Midwest (74%) than in the South (62%) and West (44%). Prevalence of COVID-19, staff redeployments, outpatient centers, and urban centers were associated with greater reductions in volume in U.S. facilities in a multivariable analysis. Conclusions: We observed marked reductions in U.S. cardiovascular testing in the early phase of the pandemic and significant variability between U.S. regions. The association between reductions of volumes and COVID-19 prevalence in the United States highlighted the need for proactive efforts to maintain access to cardiovascular testing in areas most affected by outbreaks of COVID-19 infection
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