A numerical approach to 14C wiggle-match dating of organic deposits: best fits and confidence intervals

14C wiggle-match dating (WMD) of peat deposits uses the non-linear relationship between 14C age and calendar age to match the shape of a sequence of closely spaced peat 14C dates with the 14C calibration curve. A numerical approach to WMD enables the quantitative assessment of various possible wiggle-match solutions and of calendar year confidence intervals for sequences of 14C dates. We assess the assumptions, advantages, and limitations of the method. Several case-studies show that WMD results in more precise chronologies than when individual 14C dates are calibrated. WMD is most successful during periods with major excursions in the 14C calibration curve (e.g., in one case WMD could narrow down confidence intervals from 230 to 36 yr).

Crop-specific and single-species mycorrhizal inoculation is the best approach to improve crop growth in controlled environments

International audienceAbstractArbuscular mycorrhizal fungi are root symbionts that play a key role in crop growth. A systematic quantitative analysis of the response of crops to arbuscular mycorrhizal inoculation, however, remains to be done. Additionally, little is known regarding the role of mycorrhizal specificity and the diversity of the inoculum on crop growth. Therefore, we collected data from 115 inoculation studies, including 435 experiments. We then used meta-analysis to examine the effect of crop identity, arbuscular mycorrhizal fungus identity, and mycorrhizal diversity on crop biomass increase, following inoculation. Our results show that total crop biomass was on average 34.9 % higher in inoculated versus non-inoculated plants. We found that specific combinations of arbuscular mycorrhizal fungus genera and host plant families were more beneficial for growth promotion as compared to other combinations. Moreover, a single-species inoculum increased crop growth response on average by 41.2 % compared to a multi-species inoculum. Overall, our findings show that a broad range of crops highly benefit from the inoculation with arbuscular mycorrhizal fungi. They also strongly suggest that selecting specific arbuscular mycorrhizal taxa for specific crops is the most promising approach to enhance crop growth. There is no “one-size-fits-all” arbuscular mycorrhizal fungus. Finally, and at least in stable and controlled environments, inoculation with a single arbuscular mycorrhizal species is more effective, compared to inoculation with a mixture of different arbuscular mycorrhizal taxa. This may be explained by fungi superior in extraradical growth, but less beneficial to the host, that outcompete the more mutualistic fungi. Therefore, it may be beneficial to maintain a high dominance of one beneficial arbuscular mycorrhizal taxon in simplified agricultural systems

Vegetation reflectance spectroscopy for biomonitoring of heavy metal pollution in urban soils

Heavy metals in urban soils may impose a threat to public health and may negatively affect urban tree viability. Vegetation spectroscopy techniques applied to bio-indicators bring new opportunities to characterize heavy metal contamination, without being constrained by laborious soil sampling and lab-based sample processing. Here we used Tilia tomentosa trees, sampled across three European cities, as bio-indicators i) to investigate the impacts of elevated concentrations of cadmium (Cd) and lead (Pb) on leaf mass per area (LMA), total chlorophyll content (Chl), chlorophyll a to b ratio (Chla:Chlb) and the maximal PSII photochemical efficiency (Fv/Fm); and ii) to evaluate the feasibility of detecting Cd and Pb contamination using leaf reflectance spectra. For the latter, we used a partial-least-squares discriminant analysis (PLS-DA) to train spectral-based models for the classification of Cd and/or Pb contamination. We show that elevated soil Pb concentrations induced a significant decrease in the LMA and Chla:Chlb, with no decrease in Chl. We did not observe pronounced reductions of Fv/Fm due to Cd and Pb contamination. Elevated Cd and Pb concentrations induced contrasting spectral changes in the red-edge (690–740 nm) region, which might be associated with the proportional changes in leaf pigments. PLS-DA models allowed for the classifications of Cd and Pb contamination, with a classification accuracy of 86% (Kappa = 0.48) and 83% (Kappa = 0.66), respectively. PLS-DA models also allowed for the detection of a collective elevation of soil Cd and Pb, with an accuracy of 66% (Kappa = 0.49). This study demonstrates the potential of using reflectance spectroscopy for biomonitoring of heavy metal contamination in urban soils.info:eu-repo/semantics/acceptedVersio

High soil phosphorus levels overrule the potential benefits of organic farming on arbuscular mycorrhizal diversity in northern vineyards

Organic farming is a key approach to reconcile food production, biodiversity conservation and environmental sustainability. Due to reduced inputs of agrochemicals, the success of organic farming is heavily dependent on the ecosystem services provided by the soil microbial community, and in particular by arbuscular mycorrhizal fungi (AMF). Numerous studies have already shown that also grapevines (Vitis vinifera) depend on AMF for normal growth and development. To what extent organic agriculture benefits the AMF communities on vines at regional scales, however, is still poorly understood. Here, we first quantified the relative importance of organic management, soil chemical characteristics, and geography on vineyard AMF diversity and community composition. Second, we tested whether soil nutrients fundamentally change the host-AMF community dynamics through changing universality of dissimilarity overlap curves. To identify AMF communities, we used high-throughput pyrosequencing on 170 root samples from grapevines originating from 18 conventionally and 16 organically managed Belgian and Dutch vineyards. We found no differences in AMF diversity between conventionally and organically managed vineyards. Soil phosphorus content and soil acidity, however, was strongly negatively associated with AMF diversity. Together with management type (organic vs. conventional), these two soil variables did also explain most of the variation in AMF community composition. The observed accumulation of soil copper, used to control fungal diseases, especially in organically managed vineyards, did not affect AMF communities. We observed, however, that copper concentration in the soil increased with vineyard age, indicating copper accumulation in the soil over time. AMF communities showed a regularity in interactions among taxa and their host. Under high soil P availability, however, interactions became more irregular. The potential benefits of organic vineyard management in terms of a high diversity of AMF are highly compromised by elevated soil phosphorus levels which may jeopardize the role of these symbionts in improving plant health and soil fertility. Decreasing nutrient inputs, even organic, is a key step in developing diverse AMF communities in vineyards

Columbus’ footprint in Hispaniola:A paleoenvironmental record of indigenous and colonial impacts on the landscape of the central Cibao Valley, northern Dominican Republic

The 1100-year sedimentary record of Laguna Biajaca reveals human-driven landscape changes in the central Cibao Valley, Dominican Republic, Hispaniola. This sediment-filled cutoff meander is located in close proximity to pre-Colonial archaeological sites and a Colonial urban hub. It provided a nutrient-rich floodable locus for agricultural activities for indigenous communities and for the first introduction of Old World crops and cattle in the Americas. Integration of paleoecological proxies revealed the formation of a clear-water body surrounded by a palm-rich forested landscape around 1100 cal yr BP. Changes in the drainage system were linked to human-driven deforestation, which also changed the composition of the vegetation and fungal communities around the site between AD 1150 and 1500 (800 and 700 cal yr BP). Pre-Colonial modifications of the landscape were primarily the result of fire-use and small-scale clearings. Crop cultivation developed between AD 1250 and 1450 (700–500 cal yr BP). Within decades after Columbus’ arrival in Hispaniola in AD 1492, the first impacts of European colonization included the abandonment of indigenous sites and the introduction of Old World domesticated animals. During the 15th and 16th centuries the area underwent intensive land-clearing that allowed for larger scale crop cultivation. An increase of aquatic vegetation points to sediment-filling around AD 1700 (250 cal yr BP). At that time, cattle breeding expanded and rapidly provoked eutrophication while, concurrently, monocultures became regionally established. This paper provides a framework of past environmental dynamics and offers an opportunity to place archaeological findings in a context of natural and anthropogenic change

A Systematic Evaluation of Cost-Saving Dosing Regimens for Therapeutic Antibodies and Antibody-Drug Conjugates for the Treatment of Lung Cancer

Background: Expensive novel anticancer drugs put a serious strain on healthcare budgets, and the associated drug expenses limit access to life-saving treatments worldwide. Objective: We aimed to develop alternative dosing regimens to reduce drug expenses. Methods: We developed alternative dosing regimens for the following monoclonal antibodies used for the treatment of lung cancer: amivantamab, atezolizumab, bevacizumab, durvalumab, ipilimumab, nivolumab, pembrolizumab, and ramucirumab; and for the antibody-drug conjugate trastuzumab deruxtecan. The alternative dosing regimens were developed by means of modeling and simulation based on the population pharmacokinetic models developed by the license holders. They were based on weight bands and the administration of complete vials to limit drug wastage. The resulting dosing regimens were developed to comply with criteria used by regulatory authorities for in silico dose development. Results: We found that alternative dosing regimens could result in cost savings that range from 11 to 28%, and lead to equivalent pharmacokinetic exposure with no relevant increases in variability in exposure. Conclusions: Dosing regimens based on weight bands and the use of complete vials to reduce drug wastage result in less expenses while maintaining equivalent exposure. The level of evidence of our proposal is the same as accepted by regulatory authorities for the approval of alternative dosing regimens of other monoclonal antibodies in oncology. The proposed alternative dosing regimens can, therefore, be directly implemented in clinical practice.</p

Global maps of soil temperature

Research in global change ecology relies heavily on global climatic grids derived from estimates of air temperature in open areas at around 2 m above the ground. These climatic grids do not reflect conditions below vegetation canopies and near the ground surface, where critical ecosystem functions occur and most terrestrial species reside. Here, we provide global maps of soil temperature and bioclimatic variables at a 1-km² resolution for 0–5 and 5–15 cm soil depth. These maps were created by calculating the difference (i.e., offset) between in-situ soil temperature measurements, based on time series from over 1200 1-km² pixels (summarized from 8500 unique temperature sensors) across all the world’s major terrestrial biomes, and coarse-grained air temperature estimates from ERA5-Land (an atmospheric reanalysis by the European Centre for Medium-Range Weather Forecasts). We show that mean annual soil temperature differs markedly from the corresponding gridded air temperature, by up to 10°C (mean = 3.0 ± 2.1°C), with substantial variation across biomes and seasons. Over the year, soils in cold and/or dry biomes are substantially warmer (+3.6 ± 2.3°C) than gridded air temperature, whereas soils in warm and humid environments are on average slightly cooler (-0.7 ± 2.3°C). The observed substantial and biome-specific offsets emphasize that the projected impacts of climate and climate change on near-surface biodiversity and ecosystem functioning are inaccurately assessed when air rather than soil temperature is used, especially in cold environments. The global soil-related bioclimatic variables provided here are an important step forward for any application in ecology and related disciplines. Nevertheless, we highlight the need to fill remaining geographic gaps by collecting more in-situ measurements of microclimate conditions to further enhance the spatiotemporal resolution of global soil temperature products for ecological applications