Exploring local immunological adaptation of two stickleback ecotypes by experimental infection and transcriptome-wide digital gene expression analysis

Understanding the extent of local adaptation in natural populations and the mechanisms that allow individuals to adapt to their native environment is a major avenue in molecular ecology research. Evidence for the frequent occurrence of diverging ecotypes in species that inhabit multiple ecological habitats is accumulating, but experimental approaches to understanding the biological pathways as well as the underlying genetic mechanisms are still rare. Parasites are invoked as one of the major selective forces driving evolution and are themselves dependent on the ecological conditions in a given habitat. Immunological adaptation to local parasite communities is therefore expected to be a key component of local adaptation in natural populations. Here, we use next-generation sequencing technology to compare the transcriptome-wide response of experimentally infected three-spined sticklebacks from a lake and a river population, which are known to evolve under selection by distinct parasite communities. By comparing overall gene expression levels as well as the activation of functional pathways in response to parasite exposure, we identified potential differences between the two stickleback populations at several levels. Our results suggest locally adapted patterns of gene regulation in response to parasite exposure, which may reflect different local optima in the trade-off between the benefits and the disadvantages of mounting an immune response because of quantitative differences of the local parasite communities

The star formation rate history in the FORS Deep and GOODS South Fields

We measure the star formation rate (SFR) as a function of redshift z up to z \~4.5, based on B, I and (I+B) selected galaxy catalogues from the FORS Deep Field (FDF) and the K-selected catalogue from the GOODS-South field. Distances are computed from spectroscopically calibrated photometric redshifts accurate to (Delta_z / (z_spec+1)) ~0.03 for the FDF and ~0.056 for the GOODS-South field. The SFRs are derived from the luminosities at 1500 Angstroem. We find that the total SFR estimates derived from B, I and I+B catalogues agree very well (\lsim 0.1 dex) while the SFR from the K catalogue is lower by ~0.2 dex. We show that the latter is solely due to the lower star-forming activity of K-selected intermediate and low luminosity (L<L_*) galaxies. The SFR of bright (L>L_*) galaxies is independent of the selection band, i.e. the same for B, I, (I+B), and K-selected galaxy samples. At all redshifts, luminous galaxies (L>L_*) contribute only ~1/3 to the total SFR. There is no evidence for significant cosmic variance between the SFRs in the FDF and GOODs-South field, ~0.1 dex, consistent with theoretical expectations. The SFRs derived here are in excellent agreement with previous measurements provided we assume the same faint-end slope of the luminosity function as previous works (alpha ~ -1.6). However, our deep FDF data indicate a shallower slope of alpha=-1.07, implying a SFR lower by ~0.3 dex. We find the SFR to be roughly constant up to z ~4 and then to decline slowly beyond, if dust extinctions are assumed to be constant with redshift.Comment: 6 pages, 2 figures, Accepted for publication in ApJ

The Comoving Infrared Luminosity Density: Domination of Cold Galaxies across 0<z<1

In this paper we examine the contribution of galaxies with different infrared (IR) spectral energy distributions (SEDs) to the comoving infrared luminosity density, a proxy for the comoving star formation rate (SFR) density. We characterise galaxies as having either a cold or hot IR SED depending upon whether the rest-frame wavelength of their peak IR energy output is above or below 90um. Our work is based on a far-IR selected sample both in the local Universe and at high redshift, the former consisting of IRAS 60um-selected galaxies at z<0.07 and the latter of Spitzer 70um selected galaxies across 0.1<z<1. We find that the total IR luminosity densities for each redshift/luminosity bin agree well with results derived from other deep mid/far-IR surveys. At z<0.07 we observe the previously known results: that moderate luminosity galaxies (L_IR<10^11 Lsun) dominate the total luminosity density and that the fraction of cold galaxies decreases with increasing luminosity, becoming negligible at the highest luminosities. Conversely, above z=0.1 we find that luminous IR galaxies (L_IR>10^11 Lsun), the majority of which are cold, dominate the IR luminosity density. We therefore infer that cold galaxies dominate the IR luminosity density across the whole 0<z<1 range, hence appear to be the main driver behind the increase in SFR density up to z~1 whereas local luminous galaxies are not, on the whole, representative of the high redshift population.Comment: 5 pages, 3 figures, accepted for publication in MNRA

MOIRCS Deep Survey IV: Evolution of Galaxy Stellar Mass Function Back to z ~ 3

We use very deep near-infrared (NIR) imaging data obtained in MOIRCS Deep Survey (MODS) to investigate the evolution of the galaxy stellar mass function back to z~3. The MODS data reach J=24.2, H=23.1, K=23.1 (5sigma, Vega magnitude) over 103 arcmin^2 (wide) and J=25.1, H=23.7, K=24.1 over 28 arcmin^2 (deep) in the GOODS-North region. The wide and very deep NIR data allow us to measure the number density of galaxies down to low stellar mass (10^9-10^10 Msun) even at high redshift with high statistical accuracy. The normalization of the mass function decreases with redshift and the integrated stellar mass density becomes ~ 8-18% of the local value at z~2 and ~ 4-9% at z~3, which are consistent with results of previous studies in general fields. Furthermore, we found that the low-mass slope becomes steeper with redshift from alpha ~- 1.3 at z~1 to alpha ~- 1.6 at z~3, and that the evolution of the number density of low-mass (10^9-10^10 Msun) galaxies is weaker than that of M* (~10^11 Msun) galaxies. This indicates that the contribution of low-mass galaxies to the total stellar mass density has been significant at high redshift. The steepening of the low-mass slope with redshift is opposite trend expected from the stellar mass dependence of the specific star formation rate reported in previous studies. The present result suggests that the hierarchical merging process overwhelmed the effect of the stellar mass growth by star formation and was very important for the stellar mass assembly of these galaxies at 1<~z<~3.Comment: 21 pages, 18 figures, accepted for publication in Ap

Star formation history of galaxies from z=0 to z=0.7 A backward approach to the evolution of star-forming galaxies

We investigate whether the mean star formation activity of star-forming galaxies from z=0 to z=0.7 in the GOODS-S field can be reproduced by simple evolution models of these systems. In this case, such models might be used as first order references for studies at higher z to decipher when and to what extent a secular evolution is sufficient to explain the star formation history in galaxies. We selected star-forming galaxies at z=0 and at z=0.7 in IR and in UV to have access to all the recent star formation. We focused on galaxies with a stellar mass ranging between 10^{10} and 10^{11} M_sun for which the results are not biased by the selections. We compared the data to chemical evolution models developed for spiral galaxies and originally built to reproduce the main characteristics of the Milky Way and nearby spirals without fine-tuning them for the present analysis. We find a shallow decrease in the specific star formation rate (SSFR) when the stellar mass increases. The evolution of the SSFR characterizing both UV and IR selected galaxies from z=0 to z=0.7 is consistent with the models built to reproduce the present spiral galaxies. There is no need to strongly modify of the physical conditions in galaxies to explain the average evolution of their star formation from z=0 to z=0.7. We use the models to predict the evolution of the star formation rate and the metallicity on a wider range of redshift and we compare these predictions with the results of semi-analytical models.Comment: 14 pages, 10 figures. accepted for publication in Astronomy & Astrophysic

Genomics of Divergence along a Continuum of Parapatric Population Differentiation

MM received funding from the Max Planck innovation funds for this project. PGDF was supported by a Marie Curie European Reintegration Grant (proposal nr 270891). CE was supported by German Science Foundation grants (DFG, EI 841/4-1 and EI 841/6-1)

The star formation history of mass-selected galaxies in the COSMOS field

We explore the evolution of the specific star formation rate (SSFR) for 3.6um-selected galaxies of different M_* in the COSMOS field. The average SFR for sub-sets of these galaxies is estimated with stacked 1.4GHz radio continuum emission. We separately consider the total sample and a subset of galaxies (SF) that shows evidence for substantive recent star formation in the rest-frame optical SED. At 0.2<z<3 both populations show a strong and M_*-independent decrease in their SSFR towards z=0.2, best described by a power- law (1+z)^n, where n~4.3 for all galaxies and n~3.5 for SF sources. The decrease appears to have started at z>2, at least above 4x10^10M_Sun where our conclusions are most robust. We find a tight correlation with power-law dependence, SSFR (M_*)^beta, between SSFR and M_* at all z. It tends to flatten below ~10^10M_Sun if quiescent galaxies are included; if they are excluded a shallow index beta_SFG -0.4 fits the correlation. On average, higher M_* objects always have lower SSFRs, also among SF galaxies. At z>1.5 there is tentative evidence for an upper SSFR-limit that an average galaxy cannot exceed. It is suggested by a flattening of the SSFR-M_* relation (also for SF sources), but affects massive (>10^10M_Sun) galaxies only at the highest z. Below z=1.5 there thus is no direct evidence that galaxies of higher M_* experience a more rapid waning of their SSFR than lower M_* SF systems. In this sense, the data rule out any strong 'downsizing'. We combine our results with recent measurements of the galaxy (stellar) mass function in order to determine the characteristic mass of a SF galaxy (M_*=10^(10.6\pm0.4)M_Sun). In this sense, too, there is no 'downsizing'. Our analysis constitutes the most extensive SFR density determination with a single technique to z=3. Recent Herschel results are consistent with our results, but rely on far smaller samples.Comment: 37 pages, 14 figures, 7 tables; accepted for publication in the Astrophysical Journal; High resolution versions of all figures available at www.mpia-hd.mpg.de/homes/karim/research.htm

Exceptional twentieth-century slowdown in Atlantic Ocean overturning circulation

Possible changes in Atlantic meridional overturning circulation (AMOC) provide a key source of uncertainty regarding future climate change. Maps of temperature trends over the twentieth century show a conspicuous region of cooling in the northern Atlantic. Here we present multiple lines of evidence suggesting that this cooling may be due to a reduction in the AMOC over the twentieth century and particularly after 1970. Since 1990 the AMOC seems to have partly recovered. This time evolution is consistently suggested by an AMOC index based on sea surface temperatures, by the hemispheric temperature difference, by coral-based proxies and by oceanic measurements. We discuss a possible contribution of the melting of the Greenland Ice Sheet to the slowdown. Using a multi-proxy temperature reconstruction for the AMOC index suggests that the AMOC weakness after 1975 is an unprecedented event in the past millennium (p > 0.99). Further melting of Greenland in the coming decades could contribute to further weakening of the AMOC

The extraordinarily bright optical afterglow of GRB 991208 and its host galaxy

Observations of the extraordinarily bright optical afterglow (OA) of GRB 991208 started 2.1 d after the event. The flux decay constant of the OA in the R-band is -2.30 +/- 0.07 up to 5 d, which is very likely due to the jet effect, and after that it is followed by a much steeper decay with constant -3.2 +/- 0.2, the fastest one ever seen in a GRB OA. A negative detection in several all-sky films taken simultaneously to the event implies either a previous additional break prior to 2 d after the occurrence of the GRB (as expected from the jet effect). The existence of a second break might indicate a steepening in the electron spectrum or the superposition of two events. Once the afterglow emission vanished, contribution of a bright underlying SN is found, but the light curve is not sufficiently well sampled to rule out a dust echo explanation. Our determination of z = 0.706 indicates that GRB 991208 is at 3.7 Gpc, implying an isotropic energy release of 1.15 x 10E53 erg which may be relaxed by beaming by a factor > 100. Precise astrometry indicates that the GRB coincides within 0.2" with the host galaxy, thus given support to a massive star origin. The absolute magnitude is M_B = -18.2, well below the knee of the galaxy luminosity function and we derive a star-forming rate of 11.5 +/- 7.1 Mo/yr. The quasi-simultaneous broad-band photometric spectral energy distribution of the afterglow is determined 3.5 day after the burst (Dec 12.0) implying a cooling frequency below the optical band, i.e. supporting a jet model with p = -2.30 as the index of the power-law electron distribution.Comment: Accepted for publication in Astronomy and Astrophysics, 9 pages, 6 figures (Fig. 3 and Fig. 4 have been updated

Specific star-formation and the relation to stellar mass from 0<z<2 as seen in the far-infrared at 70 and 160mu

We use the Spitzer Wide-area InfraRed Extragalactic Legacy Survey (SWIRE) to explore the specific star-formation activity of galaxies and their evolution near the peak of the cosmic far-infrared (FIR) background at 70 and 160um. We use a stacking analysis to determine the mean FIR properties of well defined subsets of galaxies at flux levels well below the FIR catalogue detection limits of SWIRE and other Spitzer surveys. We tabulate the contribution of different subsets of galaxies to the FIR background at 70um and 160um. These long wavelengths provide a good constraint on the bolometric, obscured emission. The large area provides good constraints at low z and in finer redshift bins than previous work. At all redshifts we find that the specific FIR Luminosity (sLFIR) decreases with increasing mass, following a trend L_FIR/M* propto M_* ^beta with beta =-0.38\pm0.14. This is a more continuous change than expected from the {Delucia2007} semi-analytic model suggesting modifications to the feedback prescriptions. We see an increase in the sLFIR by about a factor of ~100 from 0<z<2 and find that the sLFIR evolves as (1+z)^alpha with alpha=4.4\pm0.3 for galaxies with 10.5 < log M*/Msun < 12. This is considerably steeper than the {Delucia2007} semi-analytic model (alpha \sim 2.5). When separating galaxies into early and late types on the basis of the optical/IR spectral energy distributions we find that the decrease in sLFIR with stellar mass is stronger in early type galaxies (beta ~ -0.46), while late type galaxies exhibit a flatter trend (beta \sim -0.15). The evolution is strong for both classes but stronger for the early type galaxies. The early types show a trend of decreasing strength of evolution as we move from lower to higher masses while the evolution of the late type galaxies has little dependence on stellar mass. We suggest that in late-type galaxies we are seeing a consistently declining sSFR..Comment: v2 Update doesn't change the content of the paper, but now includes data files for the plots Fig 5-13 (all.plotdat, spi.plotdat and ell.plotdat on arXiv package