Investigation of Metal and Organic Contaminant Distributions and Sedimentation Rates in Backwater Lakes along the Illinois River

Systematic sub-sampling of sediment cores in sections of uniform thickness is necessary in order to evaluate historic changes in sediment quality, to determine the vertical extent of contamination, and to measure sedimentation rates. With these objectives in mind, fourteen sediment cores were collected during March 2002 using the Illinois State Water Survey vibracorer. Concentrations of metals and total organic carbon were measured using standard techniques. Concentrations of chlorinated pesticides, phenolic compounds, polycyclic aromatic hydrocarbons (PAHs), and polychlorinated biphenyls (PCBs) were measured by gas chromatography/mass spectrometry (GC-MS). The concentrations of chlorinated pesticides, phenolic compounds and polychlorinated biphenyls (PCBs) were below the method detection limit in all sediment samples analyzed. However, there was a wide range in concentrations of polycyclic aromatic hydrocarbons (PAHs) which were detected in all sediment samples. Also, a wide range of metal concentrations was noted in the sediments evaluated. Lower concentrations of metals were found in the upper 0.5 m of sediment but concentrations were elevated at depths ranging from 1.0 m to 1.5 m. Sedimentation rates were estimated using cesium-137 radiometric dating on 14 vibracores. Sedimentation rates range from < 0.1 to 1.9 cm/yr, with an average of 0.9 cm/yr. These rates are comparable to those reported in previous studies.Illinois Sustainable Technology Centerpublished or submitted for publicationis peer reviewe

Draft Report: Sediment Characterization in the Middle Peoria Pool, Illinois River

The Illinois Waterway (IWW) is a significant resource to the state of Illinois and the nation as a whole. Commercial navigation on the Illinois Waterway provides a vital means for transporting commodities to and from blue water ports on the East and Gulf coasts of the United States. However throughout the world large floodplain-river ecosystems, like the Illinois River, are becoming increasingly rare. The National Research Council Committee on Aquatic Ecosystems considered this ecosystem type to be the highest priority for aquatic restoration and specifically named the Illinois River as one of three floodplain-river ecosystems within the United States having sufficient ecological integrity to recover. To address the concomitant while sometimes competing needs of commercial navigation and ecological integrity the US federal government, through the Army Corp of Engineers (COE), and the Upper Mississippi River states have proposed the Navigation and Ecological Sustainability Project (NESP) as a means of improving navigation along the Upper Mississippi and Illinois Waterways while improving and/or mitigating the environmental impacts associated with the navigation improvements. As part of this effort it is envisioned that certain backwater areas within the middle Peoria Pool area will be dredged and the dredged material will be used for the construction of islands, elevated floodplain areas or other beneficial uses. These deep water areas will provide suitable overwinter habitat for native fish species while the islands and elevated floodplain areas will diversify terrestrial habitats within that river reach and provide loafing and nesting habitat for waterfowl and shorebirds. These Options 1-3 of this project seek to provide additional data to help further characterize the sediments found in the middle reach of the Illinois River. For this project that area can generally be described as that portion of the Illinois River between Lacon and Chillicothe IL. The descriptions, photos, and analytical results of the analyses for the 16 sediment cores collected May 8-9, 2006 are presented.U.S. Army Corps of Engineers, Rock Island DistrictResults for Contract Options 1-3........................................................................... 1 Introduction ............................................................. 1 Acknowledgments ................................................... 1 Study Area ............................................................. 1 Methods .................................................................. 3 Results ................................................................... 4 References ............................................................ 5 Results for Contract Base Option .......................... 7 Appendix A. Field Sheets ....................................... 48 Appendix B. Standard Operating Procedures for the Collection of Sediment Cores Using the Rossfelder 3-Pc Vibrocore ............. 54 Appendix C. Chemical Results from Severn Trent Laboratories ..........62 Appendix D. Particle Size Results ............................................... 195 Appendix E. Percent Moisture ................................................... 230 Appendix F. Photographs of Sediment Cores ............................ 234Ope

Source Monitoring and Evaluation of Sediment Inputs for Peoria Lake

NOTE: ISWS Library copies were labeled as ISWS CR 514, but this designation is not included in the report itself. and there was no ISWS Contract Report CR-514 listed on the ISWS website or ISWS pubs database.Ope

Tubular cell and keratinocyte single-cell transcriptomics applied to lupus nephritis reveal type I IFN and fibrosis relevant pathways.

The molecular and cellular processes that lead to renal damage and to the heterogeneity of lupus nephritis (LN) are not well understood. We applied single-cell RNA sequencing (scRNA-seq) to renal biopsies from patients with LN and evaluated skin biopsies as a potential source of diagnostic and prognostic markers of renal disease. Type I interferon (IFN)-response signatures in tubular cells and keratinocytes distinguished patients with LN from healthy control subjects. Moreover, a high IFN-response signature and fibrotic signature in tubular cells were each associated with failure to respond to treatment. Analysis of tubular cells from patients with proliferative, membranous and mixed LN indicated pathways relevant to inflammation and fibrosis, which offer insight into their histologic differences. In summary, we applied scRNA-seq to LN to deconstruct its heterogeneity and identify novel targets for personalized approaches to therapy

The immune cell landscape in kidneys of patients with lupus nephritis.

Lupus nephritis is a potentially fatal autoimmune disease for which the current treatment is ineffective and often toxic. To develop mechanistic hypotheses of disease, we analyzed kidney samples from patients with lupus nephritis and from healthy control subjects using single-cell RNA sequencing. Our analysis revealed 21 subsets of leukocytes active in disease, including multiple populations of myeloid cells, T cells, natural killer cells and B cells that demonstrated both pro-inflammatory responses and inflammation-resolving responses. We found evidence of local activation of B cells correlated with an age-associated B-cell signature and evidence of progressive stages of monocyte differentiation within the kidney. A clear interferon response was observed in most cells. Two chemokine receptors, CXCR4 and CX3CR1, were broadly expressed, implying a potentially central role in cell trafficking. Gene expression of immune cells in urine and kidney was highly correlated, which would suggest that urine might serve as a surrogate for kidney biopsies

Genetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization.

The QT interval, an electrocardiographic measure reflecting myocardial repolarization, is a heritable trait. QT prolongation is a risk factor for ventricular arrhythmias and sudden cardiac death (SCD) and could indicate the presence of the potentially lethal mendelian long-QT syndrome (LQTS). Using a genome-wide association and replication study in up to 100,000 individuals, we identified 35 common variant loci associated with QT interval that collectively explain ∼8-10% of QT-interval variation and highlight the importance of calcium regulation in myocardial repolarization. Rare variant analysis of 6 new QT interval-associated loci in 298 unrelated probands with LQTS identified coding variants not found in controls but of uncertain causality and therefore requiring validation. Several newly identified loci encode proteins that physically interact with other recognized repolarization proteins. Our integration of common variant association, expression and orthogonal protein-protein interaction screens provides new insights into cardiac electrophysiology and identifies new candidate genes for ventricular arrhythmias, LQTS and SCD

Impact of renal impairment on atrial fibrillation: ESC-EHRA EORP-AF Long-Term General Registry

Background: Atrial fibrillation (AF) and renal impairment share a bidirectional relationship with important pathophysiological interactions. We evaluated the impact of renal impairment in a contemporary cohort of patients with AF. Methods: We utilised the ESC-EHRA EORP-AF Long-Term General Registry. Outcomes were analysed according to renal function by CKD-EPI equation. The primary endpoint was a composite of thromboembolism, major bleeding, acute coronary syndrome and all-cause death. Secondary endpoints were each of these separately including ischaemic stroke, haemorrhagic event, intracranial haemorrhage, cardiovascular death and hospital admission. Results: A total of 9306 patients were included. The distribution of patients with no, mild, moderate and severe renal impairment at baseline were 16.9%, 49.3%, 30% and 3.8%, respectively. AF patients with impaired renal function were older, more likely to be females, had worse cardiac imaging parameters and multiple comorbidities. Among patients with an indication for anticoagulation, prescription of these agents was reduced in those with severe renal impairment, p&nbsp;&lt;.001. Over 24&nbsp;months, impaired renal function was associated with significantly greater incidence of the primary composite outcome and all secondary outcomes. Multivariable Cox regression analysis demonstrated an inverse relationship between eGFR and the primary outcome (HR 1.07 [95% CI, 1.01–1.14] per 10&nbsp;ml/min/1.73&nbsp;m2 decrease), that was most notable in patients with eGFR &lt;30&nbsp;ml/min/1.73&nbsp;m2 (HR 2.21 [95% CI, 1.23–3.99] compared to eGFR ≥90&nbsp;ml/min/1.73&nbsp;m2). Conclusion: A significant proportion of patients with AF suffer from concomitant renal impairment which impacts their overall management. Furthermore, renal impairment is an independent predictor of major adverse events including thromboembolism, major bleeding, acute coronary syndrome and all-cause death in patients with AF

Clinical complexity and impact of the ABC (Atrial fibrillation Better Care) pathway in patients with atrial fibrillation: a report from the ESC-EHRA EURObservational Research Programme in AF General Long-Term Registry

Background: Clinical complexity is increasingly prevalent among patients with atrial fibrillation (AF). The ‘Atrial fibrillation Better Care’ (ABC) pathway approach has been proposed to streamline a more holistic and integrated approach to AF care; however, there are limited data on its usefulness among clinically complex patients. We aim to determine the impact of ABC pathway in a contemporary cohort of clinically complex AF patients. Methods: From the ESC-EHRA EORP-AF General Long-Term Registry, we analysed clinically complex AF patients, defined as the presence of frailty, multimorbidity and/or polypharmacy. A K-medoids cluster analysis was performed to identify different groups of clinical complexity. The impact of an ABC-adherent approach on major outcomes was analysed through Cox-regression analyses and delay of event (DoE) analyses. Results: Among 9966 AF patients included, 8289 (83.1%) were clinically complex. Adherence to the ABC pathway in the clinically complex group reduced the risk of all-cause death (adjusted HR [aHR]: 0.72, 95%CI 0.58–0.91), major adverse cardiovascular events (MACEs; aHR: 0.68, 95%CI 0.52–0.87) and composite outcome (aHR: 0.70, 95%CI: 0.58–0.85). Adherence to the ABC pathway was associated with a significant reduction in the risk of death (aHR: 0.74, 95%CI 0.56–0.98) and composite outcome (aHR: 0.76, 95%CI 0.60–0.96) also in the high-complexity cluster; similar trends were observed for MACEs. In DoE analyses, an ABC-adherent approach resulted in significant gains in event-free survival for all the outcomes investigated in clinically complex patients. Based on absolute risk reduction at 1 year of follow-up, the number needed to treat for ABC pathway adherence was 24 for all-cause death, 31 for MACEs and 20 for the composite outcome. Conclusions: An ABC-adherent approach reduces the risk of major outcomes in clinically complex AF patients. Ensuring adherence to the ABC pathway is essential to improve clinical outcomes among clinically complex AF patients

52 Genetic Loci Influencing Myocardial Mass.

BACKGROUND: Myocardial mass is a key determinant of cardiac muscle function and hypertrophy. Myocardial depolarization leading to cardiac muscle contraction is reflected by the amplitude and duration of the QRS complex on the electrocardiogram (ECG). Abnormal QRS amplitude or duration reflect changes in myocardial mass and conduction, and are associated with increased risk of heart failure and death. OBJECTIVES: This meta-analysis sought to gain insights into the genetic determinants of myocardial mass. METHODS: We carried out a genome-wide association meta-analysis of 4 QRS traits in up to 73,518 individuals of European ancestry, followed by extensive biological and functional assessment. RESULTS: We identified 52 genomic loci, of which 32 are novel, that are reliably associated with 1 or more QRS phenotypes at p < 1 × 10(-8). These loci are enriched in regions of open chromatin, histone modifications, and transcription factor binding, suggesting that they represent regions of the genome that are actively transcribed in the human heart. Pathway analyses provided evidence that these loci play a role in cardiac hypertrophy. We further highlighted 67 candidate genes at the identified loci that are preferentially expressed in cardiac tissue and associated with cardiac abnormalities in Drosophila melanogaster and Mus musculus. We validated the regulatory function of a novel variant in the SCN5A/SCN10A locus in vitro and in vivo. CONCLUSIONS: Taken together, our findings provide new insights into genes and biological pathways controlling myocardial mass and may help identify novel therapeutic targets