83 research outputs found
Identification of Tsetse (Glossina spp.) using matrix-assisted laser desorption/ionisation time of flight mass spectrometry
Glossina (G.) spp. (Diptera: Glossinidae), known as tsetse flies, are vectors
of African trypanosomes that cause sleeping sickness in humans and nagana in
domestic livestock. Knowledge on tsetse distribution and accurate species
identification help identify potential vector intervention sites.
Morphological species identification of tsetse is challenging and sometimes
not accurate. The matrix-assisted laser desorption/ionisation time of flight
mass spectrometry (MALDI TOF MS) technique, already standardised for microbial
identification, could become a standard method for tsetse fly diagnostics.
Therefore, a unique spectra reference database was created for five lab-reared
species of riverine-, savannah- and forest- type tsetse flies and incorporated
with the commercial Biotyper 3.0 database. The standard formic
acid/acetonitrile extraction of male and female whole insects and their body
parts (head, thorax, abdomen, wings and legs) was used to obtain the flies'
proteins. The computed composite correlation index and cluster analysis
revealed the suitability of any tsetse body part for a rapid taxonomical
identification. Phyloproteomic analysis revealed that the peak patterns of G.
brevipalpis differed greatly from the other tsetse. This outcome was
comparable to previous theories that they might be considered as a sister
group to other tsetse spp. Freshly extracted samples were found to be matched
at the species level. However, sex differentiation proved to be less reliable.
Similarly processed samples of the common house fly Musca domestica (Diptera:
Muscidae; strain: Lei) did not yield any match with the tsetse reference
database. The inclusion of additional strains of morphologically defined wild
caught flies of known origin and the availability of large-scale mass
spectrometry data could facilitate rapid tsetse species identification in the
futur
Numerical study of circulation on the inner Amazon Shelf
Author Posting. © Springer, 2008. This is the author's version of the work. It is posted here by permission of Springer for personal use, not for redistribution. The definitive version was published in Ocean Dynamics 58 (2008): 187-198, doi:10.1007/s10236-008-0139-4.We studied the circulation on the coastal
domain of the Amazon Shelf by applying the hydrodynamic
module of the Estuarine and Coastal Ocean
Model and Sediment Transport - ECOMSED. The first
barotropic experiment aimed to explain the major bathymetric
effects on tides and those generated by anisotropy
in sediment distribution. We analyzed the continental
shelf response of barotropic tides under realistic bottom
stress parametrization (Cd), considering sediment granulometry
obtained from a faciologic map, where river
mud deposits and reworked sediments areas are well distinguished,
among others classes of sediments. Very low
Cd values were set in the fluid mud regions off the Amapa
coast (1.0 10-4 ), in contrast to values around 3:5 10-3
for coarser sediment regions off the Para coast. Three-dimensional
experiments represented the Amazon River
discharge and trade winds, combined to barotropic tide
influences and induced vertical mixing. The quasi-resonant
response of the Amazon Shelf to the M2 tide act on
the local hydrodynamics by increasing tidal admittance,
along with tidal forcing at the shelf break and extensive
fluid mud regions. Harmonic analysis of modeled
currents agreed well with analysis of the AMASSEDS
observational data set. Tidal-induced vertical shear provided
strong homogenization of threshold waters, which
are subject to a kind of hydraulic control due to the topographic
steepness. Ahead of the hydraulic jump, the
low-salinity plume is disconnected from the bottom and
acquires negative vorticity, turning southeastward. Tides
act as a generator mechanism and topography, via hydraulic
control, as a maintainer mechanism for the low-salinity
frontal zone positioning. Tidally induced southeastward
plume fate is overwhelmed by northwestward
trade winds so that, along with background circulation,
probably play the most important role on the plume fate
and variability over the Amazon Shelf
Global Analysis of Circulating Immune Cells by Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry
Background: MALDI-TOF mass spectrometry is currently used in microbiological diagnosis to characterize bacterial populations. Our aim was to determine whether this technique could be applied to intact eukaryotic cells, and in particular, to cells involved in the immune response. Methodology/Principal Findings: A comparison of frozen monocytes, T lymphocytes and polymorphonuclear leukocytes revealed specific peak profiles. We also found that twenty cell types had specific profiles, permitting the establishment of a cell database. The circulating immune cells, namely monocytes, T lymphocytes and polymorphonuclear cells, were distinct from tissue immune cells such as monocyte-derived macrophages and dendritic cells. In addition, MALDI-TOF mass spectrometry was valuable to easily identify the signatures of monocytes and T lymphocytes in peripheral mononuclear cells. Conclusions/Significance: This method was rapid and easy to perform, and unlike flow cytometry, it did not require any additional components such as specific antibodies. The MALDI-TOF mass spectrometry approach could be extended t
Anthropogenic perturbation of the carbon fluxes from land to ocean
A substantial amount of the atmospheric carbon taken up on land through photosynthesis and chemical weathering is transported laterally along the aquatic continuum from upland terrestrial ecosystems to the ocean. So far, global carbon budget estimates have implicitly assumed that the transformation and lateral transport of carbon along this aquatic continuum has remained unchanged since pre-industrial times. A synthesis of published work reveals the magnitude of present-day lateral carbon fluxes from land to ocean, and the extent to which human activities have altered these fluxes. We show that anthropogenic perturbation may have increased the flux of carbon to inland waters by as much as 1.0 Pg C yr-1 since pre-industrial times, mainly owing to enhanced carbon export from soils. Most of this additional carbon input to upstream rivers is either emitted back to the atmosphere as carbon dioxide (~0.4 Pg C yr-1) or sequestered in sediments (~0.5 Pg C yr-1) along the continuum of freshwater bodies, estuaries and coastal waters, leaving only a perturbation carbon input of ~0.1 Pg C yr-1 to the open ocean. According to our analysis, terrestrial ecosystems store ~0.9 Pg C yr-1 at present, which is in agreement with results from forest inventories but significantly differs from the figure of 1.5 Pg C yr-1 previously estimated when ignoring changes in lateral carbon fluxes. We suggest that carbon fluxes along the land–ocean aquatic continuum need to be included in global carbon dioxide budgets.Peer reviewe
Baicalein increases the expression and reciprocal interplay of RUNX3 and FOXO3a through crosstalk of AMPKα and MEK/ERK1/2 signaling pathways in human non-small cell lung cancer cells
EuPRAXIA - A Compact, Cost-Efficient Particle and Radiation Source
Plasma accelerators present one of the most suitable candidates for the development of more compact particle acceleration technologies, yet they still lag behind radiofrequency (RF)-based devices when it comes to beam quality, control, stability and power efficiency. The Horizon 2020-funded project EuPRAXIA (“European Plasma Research Accelerator with eXcellence In Applications”) aims to overcome the first three of these hurdles by developing a conceptual design for a first international user facility based on plasma acceleration. In this paper we report on the main features, simulation studies and potential applications of this future research infrastructure
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Understanding adsorption and desorption processes in mesoporous materials with independent disordered channels
Using a lattice-gas model in mean-field theory, we discuss the problem of how adsorption and desorption of fluids in independent cylinderlike pores is influenced by variations in the pore diameter along the length of the pore, surface roughness of the pore walls, and chemical heterogeneity. We also consider the impact of contact with the bulk phase via the pore opening and the possibility of interactions between neighboring pores via a liquid film on the external surface of the material. We find that a combination of pore size variation along the length of the pore and surface roughness yields sorption hysteresis similar to that found in systems with three-dimensional disordered pore networks such as porous glasses. Our results are especially relevant to adsorption and desorption in porous silicon materials with independent linear pores and apparently anomalous features of the behavior in these systems can be accounted for within the context of the present model
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Probing memory effects in confined fluids via diffusion measurements
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