The Trypanosoma cruzi Sylvio X10 strain maxicircle sequence: the third musketeer

<p>Abstract</p> <p>Background</p> <p>Chagas disease has a diverse pathology caused by the parasite <it>Trypanosoma cruzi</it>, and is indigenous to Central and South America. A pronounced feature of the trypanosomes is the kinetoplast, which is comprised of catenated maxicircles and minicircles that provide the transcripts involved in uridine insertion/deletion RNA editing. <it>T. cruzi </it>exchange genetic material through a hybridization event. Extant strains are grouped into six discrete typing units by nuclear markers, and three clades, A, B, and C, based on maxicircle gene analysis. Clades A and B are the more closely related. Representative clade B and C maxicircles are known in their entirety, and portions of A, B, and C clades from multiple strains show intra-strain heterogeneity with the potential for maxicircle taxonomic markers that may correlate with clinical presentation.</p> <p>Results</p> <p>To perform a genome-wide analysis of the three maxicircle clades, the coding region of clade A representative strain Sylvio X10 (a.k.a. Silvio X10) was sequenced by PCR amplification of specific fragments followed by assembly and comparison with the known CL Brener and Esmeraldo maxicircle sequences. The clade A rRNA and protein coding region maintained synteny with clades B and C. Amino acid analysis of non-edited and 5'-edited genes for Sylvio X10 showed the anticipated gene sequences, with notable frameshifts in the non-edited regions of Cyb and ND4. Comparisons of genes that undergo extensive uridine insertion and deletion display a high number of insertion/deletion mutations that are likely permissible due to the post-transcriptional activity of RNA editing.</p> <p>Conclusion</p> <p>Phylogenetic analysis of the entire maxicircle coding region supports the closer evolutionary relationship of clade B to A, consistent with uniparental mitochondrial inheritance from a discrete typing unit TcI parental strain and studies on smaller fragments of the mitochondrial genome. Gene variance that can be corrected by RNA editing hints at an unusual depth for maxicircle taxonomic markers, which will aid in the ability to distinguish strains, their corresponding symptoms, and further our understanding of the <it>T. cruzi </it>population structure. The prevalence of apparently compromised coding regions outside of normally edited regions hints at undescribed but active mechanisms of genetic exchange.</p

Healable Cellulose Iontronic Hydrogel Stickers for Sustainable Electronics on Paper

The authors acknowledge the support from FCT - Portuguese Foundation for Science and Technology through the Ph.D. scholarships SFRH/BD/126409/2016 (I.C.) and SFRH/BD/122286/2016 (J.M.). The authors would like to acknowledge the European Commission under project NewFun (ERC-StG-2014, GA 640598) and project SYNERGY (H2020-WIDESPREAD-2020-5, CSA, proposal no 952169). This work was also supported by the FEDER funds through the COMPETE 2020 Program and the National Funds through the FCT - Portuguese Foundation for Science and Technology under the Project No. POCI-01-0145-FEDER-007688, reference UID/CTM/50025, project CHIHC, reference PTDC/NAN-MAT/32558/2017. The authors would also like to thank their colleagues Daniela Gomes and Ana Pimentel from CENIMAT/i3N for the SEM and DSC-TGA measurements, respectively.Novel nature-based engineered functional materials combined with sustainable and economically efficient processes are among the great challenges for the future of mankind. In this context, this work presents a new generation of versatile flexible and highly conformable regenerated cellulose hydrogel electrolytes with high ionic conductivity and self-healing ability, capable of being (re)used in electrical and electrochemical devices. They can be provided in the form of stickers and easily applied as gate dielectric onto flexible indium–gallium–zinc oxide transistors, decreasing the manufacturing complexity. Flexible and low-voltage (<2.5 V) circuits can be handwritten on-demand on paper transistors for patterning of conductive/resistive lines. This user-friendly and simplified manufacturing approach holds potential for fast production of low-cost, portable, disposable/recyclable, and low-power ion-controlled electronics on paper, making it attractive for application in sensors and concepts such as the “Internet-on-Things.”.publishersversionpublishe