Importance of tissue sampling, laboratory methods, and patient characteristics for detection of Pneumocystis in autopsied lungs of non-immunosuppressed individuals

To understand the epidemiological significance of Pneumocystis detection in a lung tissue sample of non-immunosuppressed individuals, we examined sampling procedures, laboratory methodology, and patient characteristics of autopsy series reported in the literature. Number of tissue specimens, DNA-extraction procedures, age and underlying diagnosis highly influence yield and are critical to understand yield differences of Pneumocystis among reports of pulmonary colonization in immunocompetent individuals.publishersversionpublishe

rpoB Gene mutations in rifampin-resistant Mycobacterium tuberculosis identified by polymerase chain reaction single-stranded conformational polymorphism.

The use of polymerase chain reaction-single-stranded conformational polymorphism (PCR-SSCP) to study rpoB gene mutations in rifampin-resistant (RIFr) Mycobacterium tuberculosis has yielded contradictory results. To determine the sensitivity of this method, we analyzed 35 RIFr strains and 11 rifampin-susceptible (RIFs) strains, using the DNA sequencing of the core region of rpoB for comparison. Of the RIFr, 24 had a PCR-SSCP pattern identical to that of H37Rv; the other 11 had four different patterns. The 11 RIFs had PCR-SSCP patterns identical to that of H37Rv. The sensitivity of the assay was 31.4%; its specificity was 100%. We observed a strong correlation between the degree of resistance and the type of mutation

Biomass-Based Carbon Electrodes in the Design of Supercapacitors: An Electrochemical Point of View

The urgent demand of sustainable long-lasting batteries has fostered the improvement of extended-use technologies e.g., Li-ion batteries, as well as the development of alternative energy storage strategies like supercapacitors. In this context, new carbon-based materials were developed to attain higher electrochemical performances, even though several of these materials are not obtained by eco-friendly methods and/or in a considerable amount for practical purposes. However, up-to-date reports stand out the scopes achieved by biomass-based carbon materials as energy storage electrodes combining outstanding physicochemical and electrochemical properties with low-pollutant and low-cost production. On this basis, this chapter will expose several aspects of the synthesis of carbon-based electrodes from biomass, focusing on the influence of their surface properties: porosity, crystallinity, and morphology on their electrochemical performance in supercapacitors

Learning ethical, environmental and professional responsibility at Universitat Politècnica de València. Where are we?

[EN] This paper presents a study on the development of the cross-curricular learning outcome (CCLO) "Ethical, environmental and professional responsibility" for students of different Bachelor's Degrees taught at Universitat Politecnica de Valencia (Spain). The work involved in the development of this learning outcome entails great complexity, given the double dimension of responsibility that it involves. At the end of their training at the university, students are expected to show ethical, environmental, and professional responsibility towards themselves and others. Interviews have been conducted with lecturers who work and assess this outcome in their subjects, most/all of them related to science and engineering. The objective was to identify the learning approach used in the different subjects to guarantee the acquisition of this CCLO by the students. A focus group has also been carried out with students to determine the importance they give to this learning outcome, and to know their degree of satisfaction with the training received. The methodology used to obtain the data from lecturers and students and to process the information to get a precise diagnosis is fully described in the paper. Results are satisfactory to some extent: most of the lecturers carry out appropriate activities and most students achieve the expected proficiency level. Finally, recommendations are given to improve the development of this cross-curricular learning outcome.This innovative educational project and the APC of this paper were funded by Universitat Politecnica de Valencia, through the project PIME/20-21/219 "Evaluacion del nivel de adquisicion de la CT07 Responsabilidad etica, medioambiental y profesional en los estudios de grado de la UPV. Propuestas de mejora".Gimenez-Carbo, E.; Gómez-Martín, ME.; Fenollosa Forner, EJ.; Cabedo Fabres, M.; Coll-Aliaga, E.; Andrés-Doménech, I.; Sebastiá-Frasquet, M.... (2021). Learning ethical, environmental and professional responsibility at Universitat Politècnica de València. Where are we?. Sustainability. 13(17):1-18. https://doi.org/10.3390/su13179991S118131

Enhancement of the non-invasive electroenterogram to identify intestinal pacemaker activity

Surface recording of electroenterogram (EEnG) is a non-invasive method for monitoring intestinal myoelectrical activity. However, surface EEnG is seriously affected by a variety of interferences: cardiac activity, respiration, very low frequency components and movement artefacts. The aim of this study is to eliminate respiratory interference and very low frequency components from external EEnG recording by means of empirical mode decomposition (EMD), so as to obtain more robust indicators of intestinal pacemaker activity from external EEnG signal. For this purpose, 11 recording sessions were performed in an animal model under fasting conditions and in each individual session the myoelectrical signal was recorded simultaneously in the intestinal serosa and the external abdominal surface in physiological states. Various parameters have been proposed for evaluating the efficacy of the method in reducing interferences: the signal-to-interference ratio (S/I ratio), attenuation of the target and interference signals, the normal slow wave percentage and the stability of the dominant frequency (DF) of the signal. The results show that the S/I ratio of the processed signals is significantly greater than the original values (9.66±4.44 dB vs. 1.23±5.13 dB), while the target signal was barely attenuated (-0.63±1.02 dB). The application of the EMD method also increased the percentage of the normal slow wave to 100% in each individual session and enabled the stability of the DF of the external signal to be increased considerably. Furthermore, the variation coefficient of the DF derived from the external processed signals is comparable to the coefficient obtained using internal recordings. Therefore the EMD method could be a very useful tool to improve the quality of external EEnG recording in the low frequency range, and therefore to obtain more robust indicators of the intestinal pacemaker activity from non invasive EEnG recordingsThe authors would like to thank D Alvarez-Martinez, Dr C Vila and the Veterinary Unit of the Research Centre of 'La Fe' University Hospital (Valencia, Spain), where the surgical interventions and recording sessions were carried out, and the R+D+I Linguistic Assistance Office at the UPV for their help in revising this paper. This research study was sponsored by the Ministerio de Ciencia y Tecnologia de Espana (TEC2007-64278) and by the Universidad Politecnica de Valencia, as part of a UPV research and development Grant Programme.Ye Lin, Y.; Garcia Casado, FJ.; Prats Boluda, G.; Ponce, JL.; Martínez De Juan, JL. (2009). Enhancement of the non-invasive electroenterogram to identify intestinal pacemaker activity. PHYSIOLOGICAL MEASUREMENT. 30(9):885-902. https://doi.org/10.1088/0967-3334/30/9/002S885902309Amaris, M. A., Sanmiguel, C. P., Sadowski, D. C., Bowes, K. L., & Mintchev, M. P. (2002). Digestive Diseases and Sciences, 47(11), 2480-2485. doi:10.1023/a:1020503908304Bass, P., & Wiley, J. N. (1965). Electrical and extraluminal contractile-force activity of the duodenum of the dog. The American Journal of Digestive Diseases, 10(3), 183-200. doi:10.1007/bf02233747Bradshaw, L. A., Allos, S. H., Wikswo, J. P., & Richards, W. O. (1997). Correlation and comparison of magnetic and electric detection of small intestinal electrical activity. American Journal of Physiology-Gastrointestinal and Liver Physiology, 272(5), G1159-G1167. doi:10.1152/ajpgi.1997.272.5.g1159Camilleri, M., Hasler, W. L., Parkman, H. P., Quigley, E. M. M., & Soffer, E. (1998). Measurement of gastrointestinal motility in the GI laboratory. Gastroenterology, 115(3), 747-762. doi:10.1016/s0016-5085(98)70155-6Chen, J. D. Z., & Lin, Z. (1993). Adaptive cancellation of the respiratory artifact in surface recording of small intestinal electrical activity. Computers in Biology and Medicine, 23(6), 497-509. doi:10.1016/0010-4825(93)90097-kChen, J., & McCallum, R. W. (1991). Electrogastrography: measuremnt, analysis and prospective applications. Medical & Biological Engineering & Computing, 29(4), 339-350. doi:10.1007/bf02441653Chen, J. D. Z., Schirmer, B. D., & McCallum, R. W. (1993). Measurement of electrical activity of the human small intestine using surface electrodes. IEEE Transactions on Biomedical Engineering, 40(6), 598-602. doi:10.1109/10.237682Garcia-Casado, J., Martinez-de-Juan, J. L., & Ponce, J. L. (2005). Noninvasive Measurement and Analysis of Intestinal Myoelectrical Activity Using Surface Electrodes. IEEE Transactions on Biomedical Engineering, 52(6), 983-991. doi:10.1109/tbme.2005.846730Gordon, A. D. (1987). A Review of Hierarchical Classification. Journal of the Royal Statistical Society. Series A (General), 150(2), 119. doi:10.2307/2981629Huang, N. E., Shen, Z., Long, S. R., Wu, M. C., Shih, H. H., Zheng, Q., … Liu, H. H. (1998). The empirical mode decomposition and the Hilbert spectrum for nonlinear and non-stationary time series analysis. Proceedings of the Royal Society of London. Series A: Mathematical, Physical and Engineering Sciences, 454(1971), 903-995. doi:10.1098/rspa.1998.0193Irimia, A., & Bradshaw, L. A. (2005). Artifact reduction in magnetogastrography using fast independent component analysis. Physiological Measurement, 26(6), 1059-1073. doi:10.1088/0967-3334/26/6/015Lammers, W. J. E. P., & Stephen, B. (2008). Origin and propagation of individual slow waves along the intact feline small intestine. Experimental Physiology, 93(3), 334-346. doi:10.1113/expphysiol.2007.039180Liang, H. (2001). Adaptive independent component analysis of multichannel electrogastrograms. Medical Engineering & Physics, 23(2), 91-97. doi:10.1016/s1350-4533(01)00019-4Liang, J., Cheung, J. Y., & Chen, J. D. Z. (1997). Detection and deletion of motion artifacts in electrogastrogram using feature analysis and neural networks. Annals of Biomedical Engineering, 25(5), 850-857. doi:10.1007/bf02684169Liang, H., Lin, Z., & McCallum, R. W. (2000). Artifact reduction in electrogastrogram based on empirical mode decomposition method. Medical & Biological Engineering & Computing, 38(1), 35-41. doi:10.1007/bf02344686Zhi-Yue Lin, Chen, Z., & Jian De. (1994). Time-frequency representation of the electrogastrogram-application of the exponential distribution. IEEE Transactions on Biomedical Engineering, 41(3), 267-275. doi:10.1109/10.284945Lin, Z. Y., & Chen, J. D. Z. (1994). Recursive running DCT algorithm and its application in adaptive filtering of surface electrical recording of small intestine. Medical & Biological Engineering & Computing, 32(3), 317-322. doi:10.1007/bf02512529Lin, Z., & Chen, J. D. Z. (1995). Comparison of three running spectral analysis methods for electrogastrographic signals. Medical & Biological Engineering & Computing, 33(4), 596-604. doi:10.1007/bf02522520Maestri, R., Pinna, G. D., Porta, A., Balocchi, R., Sassi, R., Signorini, M. G., … Raczak, G. (2007). Assessing nonlinear properties of heart rate variability from short-term recordings: are these measurements reliable? Physiological Measurement, 28(9), 1067-1077. doi:10.1088/0967-3334/28/9/008Martinez-de-Juan, J. ., Saiz, J., Meseguer, M., & Ponce, J. . (2000). Small bowel motility: relationship between smooth muscle contraction and electroenterogram signal. Medical Engineering & Physics, 22(3), 189-199. doi:10.1016/s1350-4533(00)00032-1Mintchev, M. P., Kingma, Y. J., & Bowes, K. L. (1993). Accuracy of cutaneous recordings of gastric electrical activity. Gastroenterology, 104(5), 1273-1280. doi:10.1016/0016-5085(93)90334-9Prats-Boluda, G., Garcia-Casado, J., Martinez-de-Juan, J. L., & Ponce, J. L. (2007). Identification of the slow wave component of the electroenterogram from Laplacian abdominal surface recordings in humans. Physiological Measurement, 28(9), 1115-1133. doi:10.1088/0967-3334/28/9/012Quigley, E. M. M. (1996). GASTRIC AND SMALL INTESTINAL MOTILITY IN HEALTH AND DISEASE. Gastroenterology Clinics of North America, 25(1), 113-145. doi:10.1016/s0889-8553(05)70368-xSeidel, S. A., Bradshaw, L. A., Ladipo, J. K., Wikswo, J. P., & Richards, W. O. (1999). Noninvasive detection of ischemic bowel. Journal of Vascular Surgery, 30(2), 309-319. doi:10.1016/s0741-5214(99)70142-4Tomomasa, T., Morikawa, A., Sandler, R. H., Mansy, H. A., Koneko, H., Masahiko, T., … Itoh, Z. (1999). Gastrointestinal Sounds and Migrating Motor Complex in Fasted Humans. American Journal of Gastroenterology, 94(2), 374-381. doi:10.1111/j.1572-0241.1999.00862.xWang, Z. S., Cheung, J. Y., & Chen, J. D. Z. (1999). Blind separation of multichannel electrogastrograms using independent component analysis based on a neural network. Medical & Biological Engineering & Computing, 37(1), 80-86. doi:10.1007/bf0251327

Experimental behavior of a masonry wall supported on a RC twoway slab

This paper discusses the experimental results of a prototype slab-wall that is subjected to vertical and horizontal cyclic loading. The key aspects under discussion are: (a) the differences between the capacity resistance of a wall supported on a slab vs. a wall supported on a fixed base, (b) the implications when shear walls are placed directly on transfer concrete slabs, and (c) the effects that these walls cause on the slabs. The most important results presented herein are the change on lateral stiffness and resistance capacity of the load-bearing wall supported on a slab versus the wall supported on a fixed base. Analytical finite element slab-wall models were built using ANSYS. During the experimental test process of horizontal loading, we detected that the stiffness of the slab-wall system decreased by a third compared to the one on the fixed base wall; a result that supported by the numerical models

Multidrug resistant pulmonary tuberculosis treatment regimens and patient outcomes: an individual patient data meta-analysis of 9,153 patients.

Treatment of multidrug resistant tuberculosis (MDR-TB) is lengthy, toxic, expensive, and has generally poor outcomes. We undertook an individual patient data meta-analysis to assess the impact on outcomes of the type, number, and duration of drugs used to treat MDR-TB

The Pierre Auger Observatory III: Other Astrophysical Observations

Astrophysical observations of ultra-high-energy cosmic rays with the Pierre Auger ObservatoryComment: Contributions to the 32nd International Cosmic Ray Conference, Beijing, China, August 201

The exposure of the hybrid detector of the Pierre Auger Observatory

The Pierre Auger Observatory is a detector for ultra-high energy cosmic rays. It consists of a surface array to measure secondary particles at ground level and a fluorescence detector to measure the development of air showers in the atmosphere above the array. The "hybrid" detection mode combines the information from the two subsystems. We describe the determination of the hybrid exposure for events observed by the fluorescence telescopes in coincidence with at least one water-Cherenkov detector of the surface array. A detailed knowledge of the time dependence of the detection operations is crucial for an accurate evaluation of the exposure. We discuss the relevance of monitoring data collected during operations, such as the status of the fluorescence detector, background light and atmospheric conditions, that are used in both simulation and reconstruction.Comment: Paper accepted by Astroparticle Physic