The Glasgow-Maastricht foot model, evaluation of a 26 segment kinematic model of the foot

BACKGROUND: Accurately measuring of intrinsic foot kinematics using skin mounted markers is difficult, limited in part by the physical dimensions of the foot. Existing kinematic foot models solve this problem by combining multiple bones into idealized rigid segments. This study presents a novel foot model that allows the motion of the 26 bones to be individually estimated via a combination of partial joint constraints and coupling the motion of separate joints using kinematic rhythms. METHODS: Segmented CT data from one healthy subject was used to create a template Glasgow-Maastricht foot model (GM-model). Following this, the template was scaled to produce subject-specific models for five additional healthy participants using a surface scan of the foot and ankle. Forty-three skin mounted markers, mainly positioned around the foot and ankle, were used to capture the stance phase of the right foot of the six healthy participants during walking. The GM-model was then applied to calculate the intrinsic foot kinematics. RESULTS: Distinct motion patterns where found for all joints. The variability in outcome depended on the location of the joint, with reasonable results for sagittal plane motions and poor results for transverse plane motions. CONCLUSIONS: The results of the GM-model were comparable with existing literature, including bone pin studies, with respect to the range of motion, motion pattern and timing of the motion in the studied joints. This novel model is the most complete kinematic model to date. Further evaluation of the model is warranted

PGRMC1: a new biomarker for the estrogen receptor in breast cancer

Estrogen receptor (ER) status is a critical biomarker in breast cancer, in large part because the ER is the target of tamoxifen and similar drugs. In the previous issue of Breast Cancer Research, Neubauer and colleagues used a proteomic approach to identify proteins that are differentially regulated by ER in breast tumors. The authors showed that ER-negative tumors have elevated levels of PGRMC1 (progesterone receptor membrane component-1), a hormone receptor component and binding partner for P450 proteins. In contrast, PGRMC1 was phosphorylated in ER-positive tumors. The staining patterns of ER and PGRMC1 were mutually exclusive in breast tumor sections, and PGRMC1 staining was sharply increased in hypoxic areas of the tumor. The results suggest that PGRMC1 is a candidate biomarker for ER status and hypoxia in breast cancer

Ecological compatibility of GM crops and biological control

Insect-resistant and herbicide-tolerant genetically modified (GM) crops pervade many modern cropping systems (especially field-cropping systems), and present challenges and opportunities for developing biologically based pest-management programs. Interactions between biological control agents (insect predators, parasitoids, and pathogens) and GM crops exceed simple toxicological relationships, a priority for assessing risk of GM crops to non-target species. To determine the compatibility of biological control and insect-resistant and herbicide-tolerant GM crop traits within integrated pest-management programs, this synthesis prioritizes understanding the bi-trophic and prey/host-mediated ecological pathways through which natural enemies interact within cropland communities, and how GM crops alter the agroecosystems in which natural enemies live. Insect-resistant crops can affect the quantity and quality of non-prey foods for natural enemies, as well as the availability and quality of both target and non-target pests that serve as prey/hosts. When they are used to locally eradicate weeds, herbicide-tolerant crops alter the agricultural landscape by reducing or changing the remaining vegetational diversity. This vegetational diversity is fundamental to biological control when it serves as a source of habitat and nutritional resources. Some inherent qualities of both biological control and GM crops provide opportunities to improve upon sustainable IPM systems. For example, biological control agents may delay the evolution of pest resistance to GM crops, and suppress outbreaks of secondary pests not targeted by GM plants, while herbicide-tolerant crops facilitate within-field management of vegetational diversity that can enhance the efficacy of biological control agents. By examining the ecological compatibility of biological control and GM crops, and employing them within an IPM framework, the sustainability and profitability of farming may be improved

Structural basis for CRISPR RNA-guided DNA recognition by Cascade

The CRISPR (clustered regularly interspaced short palindromic repeats) immune system in prokaryotes uses small guide RNAs to neutralize invading viruses and plasmids. In Escherichia coli, immunity depends on a ribonucleoprotein complex called Cascade. Here we present the composition and low-resolution structure of Cascade and show how it recognizes double-stranded DNA (dsDNA) targets in a sequence-specific manner. Cascade is a 405-kDa complex comprising five functionally essential CRISPR-associated (Cas) proteins (CasA1B2C6D1E1) and a 61-nucleotide CRISPR RNA (crRNA) with 5′-hydroxyl and 2′,3′-cyclic phosphate termini. The crRNA guides Cascade to dsDNA target sequences by forming base pairs with the complementary DNA strand while displacing the noncomplementary strand to form an R-loop. Cascade recognizes target DNA without consuming ATP, which suggests that continuous invader DNA surveillance takes place without energy investment. The structure of Cascade shows an unusual seahorse shape that undergoes conformational changes when it binds target DNA.

The disruption of proteostasis in neurodegenerative diseases

Cells count on surveillance systems to monitor and protect the cellular proteome which, besides being highly heterogeneous, is constantly being challenged by intrinsic and environmental factors. In this context, the proteostasis network (PN) is essential to achieve a stable and functional proteome. Disruption of the PN is associated with aging and can lead to and/or potentiate the occurrence of many neurodegenerative diseases (ND). This not only emphasizes the importance of the PN in health span and aging but also how its modulation can be a potential target for intervention and treatment of human diseases.info:eu-repo/semantics/publishedVersio

Bacterial Gut Symbionts Contribute to Seed Digestion in an Omnivorous Beetle

Obligate bacterial symbionts alter the diets of host animals in numerous ways, but the ecological roles of facultative bacterial residents that colonize insect guts remain unclear. Carabid beetles are a common group of beneficial insects appreciated for their ability to consume insect prey and seeds, but the contributions of microbes to diet diversification in this and similar groups of facultative granivores are largely unknown.Using 16S rRNA gene clone libraries and terminal restriction fragment (tRF) length polymorphism analyses of these genes, we examined the bacterial communities within the guts of facultatively granivorous, adult Harpalus pensylvanicus (Carabidae), fed one of five dietary treatments: 1) an untreated Field population, 2) Seeds with antibiotics (seeds were from Chenopodium album), 3) Seeds without antibiotics, 4) Prey with antibiotics (prey were Acheta domesticus eggs), and 5) Prey without antibiotics. The number of seeds and prey consumed by each beetle were recorded following treatment. Harpalus pensylvanicus possessed a fairly simple gut community of approximately 3-4 bacterial operational taxonomic units (OTU) per beetle that were affiliated with the Gammaproteobacteria, Bacilli, Alphaproteobacteria, and Mollicutes. Bacterial communities of the host varied among the diet and antibiotic treatments. The field population and beetles fed seeds without antibiotics had the closest matching bacterial communities, and the communities in the beetles fed antibiotics were more closely related to each other than to those of the beetles that did not receive antibiotics. Antibiotics reduced and altered the bacterial communities found in the beetle guts. Moreover, beetles fed antibiotics ate fewer seeds, and those beetles that harbored the bacterium Enterococcus faecalis consumed more seeds on average than those lacking this symbiont.We conclude that the relationships between the bacterium E. faecalis and this factultative granivore's ability to consume seeds merit further investigation, and that facultative associations with symbiotic bacteria have important implications for the nutritional ecology of their hosts

Development and validation of a new clinical decision support tool to optimize screening for retinopathy of prematurity

Background/Aims Prematurely born infants undergo costly, stressful eye examinations to uncover the small fraction with retinopathy of prematurity (ROP) that needs treatment to prevent blindness. The aim was to develop a prediction tool (DIGIROP-Screen) with 100% sensitivity and high specificity to safely reduce screening of those infants not needing treatment. DIGIROP-Screen was compared with four other ROP models based on longitudinal weights. Methods Data, including infants born at 24–30 weeks of gestational age (GA), for DIGIROP-Screen development (DevGroup, N=6991) originate from the Swedish National Registry for ROP. Three international cohorts comprised the external validation groups (ValGroups, N=1241). Multivariable logistic regressions, over postnatal ages (PNAs) 6–14 weeks, were validated. Predictors were birth characteristics, status and age at first diagnosed ROP and essential interactions. Results ROP treatment was required in 287 (4.1%)/6991 infants in DevGroup and 49 (3.9%)/1241 in ValGroups. To allow 100% sensitivity in DevGroup, specificity at birth was 53.1% and cumulatively 60.5% at PNA 8 weeks. Applying the same cut-offs in ValGroups, specificities were similar (46.3% and 53.5%). One infant with severe malformations in ValGroups was incorrectly classified as not needing screening. For all other infants, at PNA 6–14 weeks, sensitivity was 100%. In other published models, sensitivity ranged from 88.5% to 100% and specificity ranged from 9.6% to 45.2%. Conclusions DIGIROP-Screen, a clinical decision support tool using readily available birth and ROP screening data for infants born GA 24–30 weeks, in the European and North American populations tested can safely identify infants not needing ROP screening. DIGIROP-Screen had equal or higher sensitivity and specificity compared with other models. DIGIROP-Screen should be tested in any new cohort for validation and if not validated it can be modified using the same statistical approaches applied to a specific clinical setting

Viscosity affected by nanoparticle aggregation in Al2O3-water nanofluids

An investigation on viscosity was conducted 2 weeks after the Al2O3-water nanofluids having dispersants were prepared at the volume concentration of 1-5%. The shear stress was observed with a non-Newtonian behavior. On further ultrasonic agitation treatment, the nanofluids resumed as a Newtonian fluids. The relative viscosity increases as the volume concentrations increases. At 5% volume concentration, an increment was about 60% in the re-ultrasonication nanofluids in comparison with the base fluid. The microstructure analysis indicates that a higher nanoparticle aggregation had been observed in the nanofluids before re-ultrasonication

An essential role for dNTP homeostasis following CDK-induced replication stress

Replication stress is a common feature of cancer cells, and thus a potentially important therapeutic target. Here, we show that cyclindependent kinase (CDK)-induced replication stress, resulting from Wee1 inactivation, is synthetic lethal with mutations disrupting dNTP homeostasis in fission yeast. Wee1 inactivation leads to increased dNTP demand and replication stress through CDK-induced firing of dormant replication origins. Subsequent dNTP depletion leads to inefficient DNA replication, DNA damage and to genome instability. Cells respond to this replication stress by increasing dNTP supply through histone methyltransferase Set2-dependent MBF-induced expression of Cdc22, the catalytic subunit of ribonucleotide reductase (RNR). Disrupting dNTP synthesis following Wee1 inactivation, through abrogating Set2-dependent H3K36 trimethylation or DNA integrity checkpoint inactivation results in critically low dNTP levels, replication collapse and cell death, which can be rescued by increasing dNTP levels. These findings support a ‘dNTP supply and demand’ model in which maintaining dNTP homeostasis is essential to prevent replication catastrophe in response to CDK-induced replication stress

Effect of a Fatty Acid Additive on the Kinetic Friction and Stiction of Confined Liquid Lubricants

Apresentamos neste texto parte das produções de pesquisa que acompanhou a construção de corpos inseridos num Centro de Atenção Psicossocial para Álcool e outras Drogas, em cidade do nordeste brasileiro, focando de modo mais acentuado em arranjos de masculinidades. Especial atenção é dada à tensão entre normalização de corpos e tentativas de (re)existências. A argumentação se desenvolve no campo da saúde pública, em particular o da saúde mental, e alicerçada nos estudos de gênero e sexualidade. A produção de dados se valeu de observações registradas em diário de campo, acompanhamento itinerante, composição de um coletivo de pesquisa, entrevistas, grupos focais em que, dentre outras coisas, se discutia trechos de diários de campo, rodas de conversa e oficinas com profissionais e usuári*s. A aposta metodológica foi a de forjar um modo de narrar coletivo que agenciasse experimentação e desaprendizagens corporais, junto a modos de produzir cuidado em saúde e de fazer pesquisa.Apresentamos neste texto parte das produções de pesquisa que acompanhou a construção de corpos inseridos num Centro de Atenção Psicossocial para Álcool e outras Drogas, em cidade do nordeste brasileiro, focando de modo mais acentuado em arranjos de masculinidades. Especial atenção é dada à tensão entre normalização de corpos e tentativas de (re)existências. A argumentação se desenvolve no campo da saúde pública, em particular o da saúde mental, e alicerçada nos estudos de gênero e sexualidade. A produção de dados se valeu de observações registradas em diário de campo, acompanhamento itinerante, composição de um coletivo de pesquisa, entrevistas, grupos focais em que, dentre outras coisas, se discutia trechos de diários de campo, rodas de conversa e oficinas com profissionais e usuári*s. A aposta metodológica foi a de forjar um modo de narrar coletivo que agenciasse experimentação e desaprendizagens corporais, junto a modos de produzir cuidado em saúde e de fazer pesquisa.Apresentamos neste texto parte das produções de pesquisa que acompanhou a construção de corpos inseridos num Centro de Atenção Psicossocial para Álcool e outras Drogas, em cidade do nordeste brasileiro, focando de modo mais acentuado em arranjos de masculinidades. Especial atenção é dada à tensão entre normalização de corpos e tentativas de (re)existências. A argumentação se desenvolve no campo da saúde pública, em particular o da saúde mental, e alicerçada nos estudos de gênero e sexualidade. A produção de dados se valeu de observações registradas em diário de campo, acompanhamento itinerante, composição de um coletivo de pesquisa, entrevistas, grupos focais em que, dentre outras coisas, se discutia trechos de diários de campo, rodas de conversa e oficinas com profissionais e usuári*s. A aposta metodológica foi a de forjar um modo de narrar coletivo que agenciasse experimentação e desaprendizagens corporais, junto a modos de produzir cuidado em saúde e de fazer pesquisa.Apresentamos neste texto parte das produções de pesquisa que acompanhou a construção de corpos inseridos num Centro de Atenção Psicossocial para Álcool e outras Drogas, em cidade do nordeste brasileiro, focando de modo mais acentuado em arranjos de masculinidades. Especial atenção é dada à tensão entre normalização de corpos e tentativas de (re)existências. A argumentação se desenvolve no campo da saúde pública, em particular o da saúde mental, e alicerçada nos estudos de gênero e sexualidade. A produção de dados se valeu de observações registradas em diário de campo, acompanhamento itinerante, composição de um coletivo de pesquisa, entrevistas, grupos focais em que, dentre outras coisas, se discutia trechos de diários de campo, rodas de conversa e oficinas com profissionais e usuári*s. A aposta metodológica foi a de forjar um modo de narrar coletivo que agenciasse experimentação e desaprendizagens corporais, junto a modos de produzir cuidado em saúde e de fazer pesquisa.Apresentamos neste texto parte das produções de pesquisa que acompanhou a construção de corpos inseridos num Centro de Atenção Psicossocial para Álcool e outras Drogas, em cidade do nordeste brasileiro, focando de modo mais acentuado em arranjos de masculinidades. Especial atenção é dada à tensão entre normalização de corpos e tentativas de (re)existências. A argumentação se desenvolve no campo da saúde pública, em particular o da saúde mental, e alicerçada nos estudos de gênero e sexualidade. A produção de dados se valeu de observações registradas em diário de campo, acompanhamento itinerante, composição de um coletivo de pesquisa, entrevistas, grupos focais em que, dentre outras coisas, se discutia trechos de diários de campo, rodas de conversa e oficinas com profissionais e usuári*s. A aposta metodológica foi a de forjar um modo de narrar coletivo que agenciasse experimentação e desaprendizagens corporais, junto a modos de produzir cuidado em saúde e de fazer pesquisa.Apresentamos neste texto parte das produções de pesquisa que acompanhou a construção de corpos inseridos num Centro de Atenção Psicossocial para Álcool e outras Drogas, em cidade do nordeste brasileiro, focando de modo mais acentuado em arranjos de masculinidades. Especial atenção é dada à tensão entre normalização de corpos e tentativas de (re)existências. A argumentação se desenvolve no campo da saúde pública, em particular o da saúde mental, e alicerçada nos estudos de gênero e sexualidade. A produção de dados se valeu de observações registradas em diário de campo, acompanhamento itinerante, composição de um coletivo de pesquisa, entrevistas, grupos focais em que, dentre outras coisas, se discutia trechos de diários de campo, rodas de conversa e oficinas com profissionais e usuári*s. A aposta metodológica foi a de forjar um modo de narrar coletivo que agenciasse experimentação e desaprendizagens corporais, junto a modos de produzir cuidado em saúde e de fazer pesquisa.The paper presents part of the research productions that accompanied the construction of bodies inserted in a Psychosocial Care Center for Alcohol and Other Drugs (CAPS-AD) of a city in the northern region of Brasil, focusing more sharply on masculinities arrangements. Special attention is given to the tension between normalized bodies and attempts at resistance and (re) exist. The argument is in the field of public health, particularly mental health, and rooted in gender and sexuality studies. The data production methodology made use of observations recorded in a diary, itinerant follow-up of a collective of research, interviews, focus groups where, among other things, was discussed diary topics, conversation circles and workshops. The attempt was to produce a way of collective narrating strategy, combining up experience and body (un)learn well as ways of producing health care and doing research