The Reaction of the Blood : The Mechanism of Its Regulation.

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Integrating a newly developed BAC-based physical mapping resource for Lolium perenne with a genome-wide association study across a L. Perenne European ecotype collection identifies genomic contexts associated with agriculturally important traits

Background and Aims Lolium perenne (perennial ryegrass) is the most widely cultivated forage and amenity grass species in temperate areas worldwide and there is a need to understand the genetic architectures of key agricultural traits and crop characteristics that deliver wider environmental services. Our aim was to identify genomic regions associated with agriculturally important traits by integrating a bacterial artificial chromosome (BAC)-based physical map with a genome-wide association study (GWAS). Methods BAC-based physical maps for L. perenne were constructed from similar to 212 000 high-information-content fingerprints using Fingerprint Contig and Linear Topology Contig software. BAC clones were associated with both BAC-end sequences and a partial minimum tiling path sequence. A panel of 716 L. perenne diploid genotypes from 90 European accessions was assessed in the field over 2 years, and genotyped using a Lolium Infinium SNP array. The GWAS was carried out using a linear mixed model implemented in TASSEL, and extended genomic regions associated with significant markers were identified through integration with the physical map. Key Results Between similar to 3600 and 7500 physical map contigs were derived, depending on the software and probability thresholds used, and integrated with similar to 35 k sequenced BAC clones to develop a resource predicted to span the majority of the L. perenne genome. From the GWAS, eight different loci were significantly associated with heading date, plant width, plant biomass and water-soluble carbohydrate accumulation, seven of which could be associated with physical map contigs. This allowed the identification of a number of candidate genes. Conclusions Combining the physical mapping resource with the GWAS has allowed us to extend the search for candidate genes across larger regions of the L. perenne genome and identified a number of interesting gene model annotations. These physical maps will aid in validating future sequence-based assemblies of the L. perenne genome.UK Biotechnology and Biological Sciences Research Council [BB/J004405/1, BB/CSP1730/1, BB/G012342/1]; Germinal Holdings (UK); Syngenta (UK); Vialactia Biosciences (NZ)Open access articleThis item from the UA Faculty Publications collection is made available by the University of Arizona with support from the University of Arizona Libraries. If you have questions, please contact us at [email protected]

Use of the cortical epinephrine pressor response in rabbits as a diagnostic test for schizophrenia

1. A careful replication of the Minz and Walaszek test failed to demonstrate its reliability as a clinical tool for diagnosing schizophrenia.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/46389/1/213_2004_Article_BF00405247.pd

The source of hydrogen sulfide in anoxic sediment

Putrefactive hydrogen sulfide production in the upper 4 cm of sediment in two small freshwater and eutrophic Southeast Michigan, U.S.A., lakes ranged from 0.13 to 1.51 with an average of 0.46 mg S l-1 day-1. Sulfate reductive production of hydrogen sulfide at the same sites ranged from 0.7 to 3.2 with an average of 1.54 mg S l-1 day-1. Putrefactive hydrogen sulfide production represented 5.1-53% (average of 18.3-27.6%) of the total hydrogen sulfide produced at the two lakes over an April-October study period. 35S labeled substrates were used to estimate hydrogen sulfide production rates.Proteolytic bacteria averaged 2.2 x 104 cells ml-1 sediment whereas sulfate reducers averaged 4.8 x 102 cells ml-1 sediment. Putrefactive hydrogen sulfide production correlated highly with numbers of proteolytic bacteria (r2 = 0.84) but the correlation between sulfate reduction and sulfate reducing bacteria was low (r2 = 0.13).Interstitial soluble inorganic sulfate, protein and organic carbon were not closely correlated with hydrogen sulfide production rates or bacteria enumeration results. Natural substrate concentrations (Sn) used to estimate hydrogen sulfide production were supported by kinetic bioassay results.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/25926/1/0000489.pd

From short-term store to multicomponent working memory: The role of the modal model

The term “modal model” reflects the importance of Atkinson and Shiffrin’s paper in capturing the major developments in the cognitive psychology of memory that were achieved over the previous decade, providing an integrated framework that has formed the basis for many future developments. The fact that it is still the most cited model from that period some 50 years later has, we suggest, implications for the model itself and for theorising in psychology more generally. We review the essential foundations of the model before going on to discuss briefly the way in which one of its components, the short-term store, had influenced our own concept of a multicomponent working memory. This is followed by a discussion of recent claims that the concept of a short-term store be replaced by an interpretation in terms of activated long-term memory. We present several reasons to question these proposals. We conclude with a brief discussion of the implications of the longevity of the modal model for styles of theorising in cognitive psychology