Selection and evaluation of

This study aimed to select suitable strains that can be used as inoculants to enhance legume production and simultaneously reduce the use of inorganic fertilizers. Evaluations of the selected strains of Vigna radiata on the basis of polysaccharide (exopolysaccharides and lipopolysaccharides) produced reinforced evidence that Rhizobial strains and its mutant nodulate promote growth differently under stressed environments. Strains performance evaluation demonstrated that the R0132 (1106):Tn5 inoculant of Sinorhizobium fredii (Formerly, Rhizobium fredii) is a prime candidate as a commercial inoculant. It benefited growth of V. radiata and it was more easily cultured on solid and liquid media than any of the otherstrains tested including R0132 (1112):Tn5, R0132 (0097):Tn5 and R0132 (1106):Tn5. Mutant R0132 (1106):Tn5 exhibited superior growth promoting ability under extreme environmental condition; therefore it haspotential to be used in India

Controlled coalescence-induced droplet jumping on flexible superhydrophobic substrates

Sessile droplets coalescing on superhydrophobic substrates spontaneously jump from the surface. In this process, the excess surface energy available at the initiation of coalescence overcomes the minimal surface adhesion and manifests as sufficient kinetic energy to propel the droplets away from the substrate. Here, we show that the coalescence induced droplet jumping velocity is significantly curtailed if the superhydrophobic substrate is flexible in nature. Through detailed experimental measurements and numerical simulations, we demonstrate that the droplet jumping velocity and jumping height can be reduced by as much as 40 % and 64%, respectively, by synergistically tuning the substrate stiffness and substrate frequency. We show that this hitherto unexplored aspect of droplet coalescence jumping can be gainfully exploited in water harvesting from dew and fog harvesting. Additionally, through an exemplar butterfly wing substrate, we demonstrate that this effect is likely to manifest on many natural superhydrophobic substrates due to their inherent flexibility

FRA2A is a CGG repeat expansion associated with silencing of AFF3

Folate-sensitive fragile sites (FSFS) are a rare cytogenetically visible subset of dynamic mutations. Of the eight molecularly characterized FSFS, four are associated with intellectual disability (ID). Cytogenetic expression results from CGG tri-nucleotide-repeat expansion mutation associated with local CpG hypermethylation and transcriptional silencing. The best studied is the FRAXA site in the FMR1 gene, where large expansions cause fragile X syndrome, the most common inherited ID syndrome. Here we studied three families with FRA2A expression at 2q11 associated with a wide spectrum of neurodevelopmental phenotypes. We identified a polymorphic CGG repeat in a conserved, brain-active alternative promoter of the AFF3 gene, an autosomal homolog of the X-linked AFF2/FMR2 gene: Expansion of the AFF2 CGG repeat causes FRAXE ID. We found that FRA2A-expressing individuals have mosaic expansions of the AFF3 CGG repeat in the range of several hundred repeat units. Moreover, bisulfite sequencing and pyrosequencing both suggest AFF3 promoter hypermethylation. cSNP-analysis demonstrates monoallelic expression of the AFF3 gene in FRA2A carriers thus predicting that FRA2A expression results in functional haploinsufficiency for AFF3 at least in a subset of tissues. By whole-mount in situ hybridization the mouse AFF3 ortholog shows strong regional expression in the developing brain, somites and limb buds in 9.5-12.5dpc mouse embryos. Our data suggest that there may be an association between FRA2A and a delay in the acquisition of motor and language skills in the families studied here. However, additional cases are required to firmly establish a causal relationship

Performance of the CMS Cathode Strip Chambers with Cosmic Rays

The Cathode Strip Chambers (CSCs) constitute the primary muon tracking device in the CMS endcaps. Their performance has been evaluated using data taken during a cosmic ray run in fall 2008. Measured noise levels are low, with the number of noisy channels well below 1%. Coordinate resolution was measured for all types of chambers, and fall in the range 47 microns to 243 microns. The efficiencies for local charged track triggers, for hit and for segments reconstruction were measured, and are above 99%. The timing resolution per layer is approximately 5 ns

A network-based target overlap score for characterizing drug combinations: High correlation with cancer clinical trial results

Drug combinations are highly efficient in systemic treatment of complex multigene diseases such as cancer, diabetes, arthritis and hypertension. Most currently used combinations were found in empirical ways, which limits the speed of discovery for new and more effective combinations. Therefore, there is a substantial need for efficient and fast computational methods. Here, we present a principle that is based on the assumption that perturbations generated by multiple pharmaceutical agents propagate through an interaction network and can cause unexpected amplification at targets not immediately affected by the original drugs. In order to capture this phenomenon, we introduce a novel Target Overlap Score (TOS) that is defined for two pharmaceutical agents as the number of jointly perturbed targets divided by the number of all targets potentially affected by the two agents. We show that this measure is correlated with the known effects of beneficial and deleterious drug combinations taken from the DCDB, TTD and Drugs.com databases. We demonstrate the utility of TOS by correlating the score to the outcome of recent clinical trials evaluating trastuzumab, an effective anticancer agent utilized in combination with anthracycline- and taxane-based systemic chemotherapy in HER2-receptor (erb-b2 receptor tyrosine kinase 2) positive breast cancer. © 2015 Ligeti et al

Current challenges facing the assessment of the allergenic capacity of food allergens in animal models

Food allergy is a major health problem of increasing concern. The insufficiency of protein sources for human nutrition in a world with a growing population is also a significant problem. The introduction of new protein sources into the diet, such as newly developed innovative foods or foods produced using new technologies and production processes, insects, algae, duckweed, or agricultural products from third countries, creates the opportunity for development of new food allergies, and this in turn has driven the need to develop test methods capable of characterizing the allergenic potential of novel food proteins. There is no doubt that robust and reliable animal models for the identification and characterization of food allergens would be valuable tools for safety assessment. However, although various animal models have been proposed for this purpose, to date, none have been formally validated as predictive and none are currently suitable to test the allergenic potential of new foods. Here, the design of various animal models are reviewed, including among others considerations of species and strain, diet, route of administration, dose and formulation of the test protein, relevant controls and endpoints measured

Integrated high-content quantification of intracellular ROS levels and mitochondrial morphofunction

Oxidative stress arises from an imbalance between the production of reactive oxygen species (ROS) and their removal by cellular antioxidant systems. Especially under pathological conditions, mitochondria constitute a relevant source of cellular ROS. These organelles harbor the electron transport chain, bringing electrons in close vicinity to molecular oxygen. Although a full understanding is still lacking, intracellular ROS generation and mitochondrial function are also linked to changes in mitochondrial morphology. To study the intricate relationships between the different factors that govern cellular redox balance in living cells, we have developed a high-contentmicroscopy-based strategy for simultaneous quantification of intracellular ROS levels and mitochondrial morphofunction. Here, we summarize the principles of intracellular ROS generation and removal, and we explain the major considerations for performing quantitative microscopy analyses of ROS and mitochondrial morphofunction in living cells. Next, we describe our workflow, and finally, we illustrate that a multiparametric readout enables the unambiguous classification of chemically perturbed cells as well as laminopathy patient cells

Hidden fluctuations close to a quantum bicritical point

Here, we present an alternative approach for the description of quantum critical fluctuations. These are described by Langevin random fields, which are then related to the susceptibility using the fluctuation-dissipation theorem. We use this approach to characterize the physical properties arising in the vicinity of two coupled quantum phase transitions. We consider a phenomenological model based on two scalar order parameter fields locally coupled biquadratically and having a common quantum critical point as a function of a quantum tuning parameter such as pressure or magnetic field. A self-consistent treatment shows that the uniform static susceptibilities of the two order parameter fields have the same qualitative form at low temperature even where the forms are different in the absence of the biquadratic coupling.We acknowledge support from EPSRC, Corpus Christi College, the National Science Foundation Grant No. NSF DMR-1334428, and the Increase Competitiveness Program of the Ministry of Education of the Russian Federation Grant No. NUST MISiS K2-2017-024. We are grateful to Trinity College Cambridge, the Cavendish Laboratory, and the Aspen Center for Physics, supported by National Science Foundation Grant No. NSF PHY-1066293, for hospitality. S.E.R. acknowledges support from a CONFAP Newton grant