147 research outputs found
Can stellar mass black holes be quark stars?
We investigate the possibility that stellar mass black holes, with masses in
the range of and , respectively, could be in fact
quark stars in the Color-Flavor-Locked (CFL) phase. Depending on the value of
the gap parameter, rapidly rotating CFL quark stars can achieve much higher
masses than standard neutron stars, thus making them possible stellar mass
black hole candidates. Moreover, quark stars have a very low luminosity and a
completely absorbing surface - the infalling matter on the surface of the quark
star is converted into quark matter. A possibility of distinguishing CFL quark
stars from stellar mass black holes could be through the study of thin
accretion disks around rapidly rotating quark stars and Kerr type black holes,
respectively. Furthermore, we show that the radiation properties of accretion
disks around black holes and CFL quark stars are also very similar. However,
strange stars exhibit a low luminosity, but high temperature bremsstrahlung
spectrum, which, in combination with the emission properties of the accretion
disk, may be the key signature to differentiate massive strange stars from
black hole.Comment: 27 pages, 5 figures, accepted for publication in MNRA
Global optical/infrared - X-ray correlations in X-ray binaries: quantifying disc and jet contributions
The optical/near-infrared (OIR) region of the spectra of low-mass X-ray
binaries appears to lie at the intersection of a variety of different emission
processes. In this paper we present quasi-simultaneous OIR - X-ray observations
of 33 XBs in an attempt to estimate the contributions of various emission
processes in these sources, as a function of X-ray state and luminosity. A
global correlation is found between OIR and X-ray luminosity for low-mass black
hole candidate XBs (BHXBs) in the hard X-ray state, of the form L_OIR is
proportional to Lx^0.6. This correlation holds over 8 orders of magnitude in Lx
and includes data from BHXBs in quiescence and at large distances (LMC and
M31). A similar correlation is found in low-mass neutron star XBs (NSXBs) in
the hard state. For BHXBs in the soft state, all the near-infrared (NIR) and
some of the optical emission is suppressed below the correlation, a behaviour
indicative of the jet switching off/on in transition to/from the soft state. We
compare these relations to theoretical models of a number of emission
processes. We find that X-ray reprocessing in the disc and emission from the
jets both predict a slope close to 0.6 for BHXBs, and both contribute to the
OIR in BHXBs in the hard state, the jets producing ~90 percent of the NIR
emission at high luminosities. X-ray reprocessing dominates the OIR in NSXBs in
the hard state, with possible contributions from the jets (only at high
luminosity) and the viscously heated disc. We also show that the optically
thick jet spectrum of BHXBs extends to near the K-band. (abridged)Comment: Accepted for publication in MNRAS; 19 pages, 7 figure
Accreting Black Holes
This chapter provides a general overview of the theory and observations of
black holes in the Universe and on their interpretation. We briefly review the
black hole classes, accretion disk models, spectral state classification, the
AGN classification, and the leading techniques for measuring black hole spins.
We also introduce quasi-periodic oscillations, the shadow of black holes, and
the observations and the theoretical models of jets.Comment: 41 pages, 18 figures. To appear in "Tutorial Guide to X-ray and
Gamma-ray Astronomy: Data Reduction and Analysis" (Ed. C. Bambi, Springer
Singapore, 2020). v3: fixed some typos and updated some parts. arXiv admin
note: substantial text overlap with arXiv:1711.1025
Locus-Specific Ribosomal RNA Gene Silencing in Nucleolar Dominance
The silencing of one parental set of rRNA genes in a genetic hybrid is an epigenetic phenomenon known as nucleolar dominance. We showed previously that silencing is restricted to the nucleolus organizer regions (NORs), the loci where rRNA genes are tandemly arrayed, and does not spread to or from neighboring protein-coding genes. One hypothesis is that nucleolar dominance is the net result of hundreds of silencing events acting one rRNA gene at a time. A prediction of this hypothesis is that rRNA gene silencing should occur independent of chromosomal location. An alternative hypothesis is that the regulatory unit in nucleolar dominance is the NOR, rather than each individual rRNA gene, in which case NOR localization may be essential for rRNA gene silencing. To test these alternative hypotheses, we examined the fates of rRNA transgenes integrated at ectopic locations. The transgenes were accurately transcribed in all independent transgenic Arabidopsis thaliana lines tested, indicating that NOR localization is not required for rRNA gene expression. Upon crossing the transgenic A. thaliana lines as ovule parents with A. lyrata to form F1 hybrids, a new system for the study of nucleolar dominance, the endogenous rRNA genes located within the A. thaliana NORs are silenced. However, rRNA transgenes escaped silencing in multiple independent hybrids. Collectively, our data suggest that rRNA gene activation can occur in a gene-autonomous fashion, independent of chromosomal location, whereas rRNA gene silencing in nucleolar dominance is locus-dependent
Foundations of Black Hole Accretion Disk Theory
This review covers the main aspects of black hole accretion disk theory. We
begin with the view that one of the main goals of the theory is to better
understand the nature of black holes themselves. In this light we discuss how
accretion disks might reveal some of the unique signatures of strong gravity:
the event horizon, the innermost stable circular orbit, and the ergosphere. We
then review, from a first-principles perspective, the physical processes at
play in accretion disks. This leads us to the four primary accretion disk
models that we review: Polish doughnuts (thick disks), Shakura-Sunyaev (thin)
disks, slim disks, and advection-dominated accretion flows (ADAFs). After
presenting the models we discuss issues of stability, oscillations, and jets.
Following our review of the analytic work, we take a parallel approach in
reviewing numerical studies of black hole accretion disks. We finish with a few
select applications that highlight particular astrophysical applications:
measurements of black hole mass and spin, black hole vs. neutron star accretion
disks, black hole accretion disk spectral states, and quasi-periodic
oscillations (QPOs).Comment: 91 pages, 23 figures, final published version available at
http://www.livingreviews.org/lrr-2013-
Interplay of ribosomal DNA Loci in nucleolar dominance: dominant NORs are up-regulated by chromatin dynamics in the wheat-rye system
Background: Chromatin organizational and topological plasticity, and its functions in gene expression regulation, have
been strongly revealed by the analysis of nucleolar dominance in hybrids and polyploids where one parental set of
ribosomal RNA (rDNA) genes that are clustered in nucleolar organizing regions (NORs), is rendered silent by epigenetic
pathways and heterochromatization. However, information on the behaviour of dominant NORs is very sparse and needed
for an integrative knowledge of differential gene transcription levels and chromatin specific domain interactions.
Methodology/Principal Findings: Using molecular and cytological approaches in a wheat-rye addition line (wheat genome
plus the rye nucleolar chromosome pair 1R), we investigated transcriptional activity and chromatin topology of the wheat
dominant NORs in a nucleolar dominance situation. Herein we report dominant NORs up-regulation in the addition line
through quantitative real-time PCR and silver-staining technique. Accompanying this modification in wheat rDNA
trascription level, we also disclose that perinucleolar knobs of ribosomal chromatin are almost transcriptionally silent due to
the residual detection of BrUTP incorporation in these domains, contrary to the marked labelling of intranucleolar
condensed rDNA. Further, by comparative confocal analysis of nuclei probed to wheat and rye NORs, we found that in the
wheat-rye addition line there is a significant decrease in the number of wheat-origin perinucleolar rDNA knobs,
corresponding to a diminution of the rDNA heterochromatic fraction of the dominant (wheat) NORs.
Conclusions/Significance: We demonstrate that inter-specific interactions leading to wheat-origin NOR dominance results not
only on the silencing of rye origin NOR loci, but dominant NORs are alsomodified in their transcriptional activity and interphase
organization. The results show a cross-talk between wheat and rye NORs, mediated by ribosomal chromatin dynamics,
revealing a conceptual shift from differential amphiplasty to ‘mutual amphiplasty’ in the nucleolar dominance process.This work was supported by the Fundação para a Ciência e Tecnologia (projects POCI/BIA-BDE/57575/2004 to M.S. and POCI/BIA-BCM/59389/2004 to N.N.
Loss of RNA–Dependent RNA Polymerase 2 (RDR2) Function Causes Widespread and Unexpected Changes in the Expression of Transposons, Genes, and 24-nt Small RNAs
Transposable elements (TEs) comprise a substantial portion of many eukaryotic genomes and are typically transcriptionally silenced. RNA–dependent RNA polymerase 2 (RDR2) is a component of the RNA–directed DNA methylation (RdDM) silencing pathway. In maize, loss of mediator of paramutation1 (mop1) encoded RDR2 function results in reactivation of transcriptionally silenced Mu transposons and a substantial reduction in the accumulation of 24 nt short-interfering RNAs (siRNAs) that recruit RNA silencing components. An RNA–seq experiment conducted on shoot apical meristems (SAMs) revealed that, as expected based on a model in which RDR2 generates 24 nt siRNAs that suppress expression, most differentially expressed DNA TEs (78%) were up-regulated in the mop1 mutant. In contrast, most differentially expressed retrotransposons (68%) were down-regulated. This striking difference suggests that distinct silencing mechanisms are applied to different silencing templates. In addition, >6,000 genes (24% of analyzed genes), including nearly 80% (286/361) of genes in chromatin modification pathways, were differentially expressed. Overall, two-thirds of differentially regulated genes were down-regulated in the mop1 mutant. This finding suggests that RDR2 plays a significant role in regulating the expression of not only transposons, but also of genes. A re-analysis of existing small RNA data identified both RDR2–sensitive and RDR2–resistant species of 24 nt siRNAs that we hypothesize may at least partially explain the complex changes in the expression of genes and transposons observed in the mop1 mutant
Limpet Shells from the Aterian Level 8 of El Harhoura 2 Cave (Témara, Morocco): Preservation State of Crossed-Foliated Layers
International audienceThe exploitation of mollusks by the first anatomically modern humans is a central question for archaeologists. This paper focuses on level 8 (dated around * 100 ka BP) of El Har-houra 2 Cave, located along the coastline in the Rabat-Témara region (Morocco). The large quantity of Patella sp. shells found in this level highlights questions regarding their origin and preservation. This study presents an estimation of the preservation status of these shells. We focus here on the diagenetic evolution of both the microstructural patterns and organic components of crossed-foliated shell layers, in order to assess the viability of further investigations based on shell layer minor elements, isotopic or biochemical compositions. The results show that the shells seem to be well conserved, with microstructural patterns preserved down to sub-micrometric scales, and that some organic components are still present in situ. But faint taphonomic degradations affecting both mineral and organic components are nonetheless evidenced, such as the disappearance of organic envelopes surrounding crossed-foliated lamellae, combined with a partial recrystallization of the lamellae. Our results provide a solid case-study of the early stages of the diagenetic evolution of crossed-foliated shell layers. Moreover, they highlight the fact that extreme caution must be taken before using fossil shells for palaeoenvironmental or geochronological reconstructions. Without thorough investigation, the alteration patterns illustrated here would easily have gone unnoticed. However, these degradations are liable to bias any proxy based on the elemental, isotopic or biochemical composition of the shells. This study also provides significant data concerning human subsistence behavior: the presence of notches and the good preservation state of limpet shells (no dissolution/recrystallization, no bioerosion and no abrasion/fragmentation aspects) would attest that limpets were gathered alive with tools by Middle Palaeolithic (Aterian) populations in North Africa for consumption
Black hole spin: theory and observation
In the standard paradigm, astrophysical black holes can be described solely
by their mass and angular momentum - commonly referred to as `spin' - resulting
from the process of their birth and subsequent growth via accretion. Whilst the
mass has a standard Newtonian interpretation, the spin does not, with the
effect of non-zero spin leaving an indelible imprint on the space-time closest
to the black hole. As a consequence of relativistic frame-dragging, particle
orbits are affected both in terms of stability and precession, which impacts on
the emission characteristics of accreting black holes both stellar mass in
black hole binaries (BHBs) and supermassive in active galactic nuclei (AGN).
Over the last 30 years, techniques have been developed that take into account
these changes to estimate the spin which can then be used to understand the
birth and growth of black holes and potentially the powering of powerful jets.
In this chapter we provide a broad overview of both the theoretical effects of
spin, the means by which it can be estimated and the results of ongoing
campaigns.Comment: 55 pages, 5 figures. Published in: "Astrophysics of Black Holes -
From fundamental aspects to latest developments", Ed. Cosimo Bambi, Springer:
Astrophysics and Space Science Library. Additional corrections mad
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