Automated detection of ncRNAs in the draft genome sequence of a colonial tunicate: the carpet sea squirt Didemnum vexillum

Statistics D. vexillum draft genome. (PDF 485 kb

The Diachronic Spanish Sonnet Corpus (DISCO): TEI and Linked Open Data Encoding, Data Distribution and Metrical Findings

We present a corpus covering 4094 sonnets in Spanish by 1204 authors, from the 15th to the 19th centuries, extracted from HTML sources. The corpus was encoded in TEI. Author metadata not available in a standardized format in the sources were systematically retrieved or inferred from the sources and added to the corpus, e.g. author gender or VIAF IDs. RDFa was used to render TEI semantics in the Linked Open Data paradigm. Scansion was annotated automatically with the ADSO Scansion System. Enjambment was annotated automatically with our enjambment detection tool (ANJA). Stanza types were also annotated. The corpus covers both canonical and non-canonical authors, from Europe and Latin America. The range of authors and periods, the use of both TEI and RDFa for interoperability, and the combination of metrical and enjambment annotations goes beyond previously available digital resources for the study of poetry in Spanish. This corpus is a contribution within an area where digital resources are scarce. We also present some literary analysis results that illustrate the type of research questions that can be answered with the corpus

Mercat de l'art, col·leccionisme i museus 2021

Recull de ponències presentades a la novena Jornada Mercat de l'Art, Col·leccionisme i Museus, celebrada el 8 d'octubre de 2021 a Sitges.Els capítols d'aquesta obra són: 1. Presentació / Bonaventura Bassegoda i Ignasi Domènech. 2. El col·leccionisme de dibuix antic a Catalunya. Segles XIX i XX / Bonaventura Bassegoda. 3. Pau Tachard: antiquari i col·leccionsita de teixits i ceràmica / Clara Beltrán Catalán i Vicente de la Fuente Bermúdez. 4. Alfons Macaya Sanmartí (1878-1950). L'sportsman col·leccionista de vidres / Ignasi Domènech Vives. 5. Amb la mà trencada. Carlos Duran Torrens, fotògraf i col·leccionista / María de los Santos García Felguera i Óscar González Aguilar. 6. La sátira del coleccionista y del anticuario. Narración y representación / Carlos Reyero. 7. Salvador Babra, llibreter, editor, antiquari i col·leccionista / Sebastià Sánchez Sauleda. 8. Joan Vidal Ventosa o l'ubic invisible: fotògraf i artista. Col·leccionista? / Eduard Vallès

Use of the internet as a source of health information by Spanish adolescents

<p>Abstract</p> <p>Background</p> <p>The Internet is a fundamental part of the daily life of adolescents, they consider it as a safe and confidential source of information on health matters. The aims is to describe the experience of Spanish adolescents searching for health information on the Internet.</p> <p>Methods</p> <p>A cross-sectional study of 811 school-age adolescents in Granada was carried out. An adapted and piloted questionnaire was used which was controlled by trained personnel. Sociodemographic and health variables were included together with those concerning the conditions governing access to and use of information and communication technologies (ICT).</p> <p>Results</p> <p>811 adolescents were surveyed (99.38% response rate), mean age was 17 years old. Of these, 88% used the Internet; 57.5% used it on a daily or weekly basis and 38.7% used it occasionally. Nearly half the sample group (55.7%) stated that they used the Internet to search for health-related information. The main problems reported in the search for e-health were the ignorance of good web pages (54.8%) and the lack of confidence or search skills (23.2%).</p> <p>Conclusions</p> <p>In conclusion, it seems plausible to claim that websites designed and managed by health services should have a predominant position among interventions specifically addressed to young people.</p

Assessment of websites with information on medicines

Objetivo: Identificar sitios web con información sobre medicamentos a través de expertos y evaluar su adecuación a códigos de conducta y las recomendaciones de la Organización Mundial de la Salud. Diseño: Estudio transversal de la adecuación a los criterios, a partir de un cuestionario diseñado ad hoc (efectuado independientemente por dos evaluadores). Los sitios web fueron identificados a partir de la técnica Delphi (35 expertos). Emplazamiento: Sitios web con información sobre medicamentos. Unidad de análisis: 35 sitios web seleccionados por la técnica Delphi. En la tercera ronda se alcanzó un nivel de estabilidad (variabilidad intercuartílica) aceptable (< 0,05). Mediciones principales: Responsabilidad, transparencia y honestidad, autoría de la información, política editorial, protección de datos personales, actualización de la información y accesibilidad. Se realizó un análisis descriptivo del cumplimiento y se estimó el coeficiente kappa para valorar la concordancia entre evaluadores (criterios de Fleiss). Resultados: Destacan con cumplimiento general alto el National Prescribing Service Limited (NPS), PubMed, British Medical Journal, New England Journal of Medicine, Journal of American Medical Association, The Lancet, Fisterra y National Institute for Health and Clinical Excellence. La dimensión de actualización de la información es la que presentó una menor valoración para los diferentes sitios web. Conclusiones: La calidad de los sitios web sobre medicamentos recomendada por expertos es variable. Sin embargo, hay diversos sitios web de cumplimiento alto, que se detallan en el informe.Aims: To identify websites with information on medicines and assess, using experts, their adherence to codes of conduct and recommendations by the WHO. Design: Cross-sectional study based on an ad hoc designed questionnaire (performed independently by 2 reviewers). The websites were identified by the Delphi technique (35 experts). Setting: Websites with information on medicines. Participants: A total of 35 websites selected by the Delphi technique. An acceptable level of stability was achieved in the third round (interquartile variability; <0.05). Main measurements: Responsibility, transparency and honesty, authorship of the information, content review policy, privacy and data protection policies, updated information and accessibility. A descriptive analysis of compliance was carried out and the kappa coefficient was estimated to evaluate the agreement between assessors (Fleiss's Criteria). Results: The National Prescribing Service Limited (NPS), PubMed, British Medical Journal, New England Journal of Medicine, Journal of American Medical Association, The Lancet, Fisterra and National Institute for Health and Clinical Excellence stood out with an overall high fulfilment of the questionnaire. The updated information dimension was the lowest evaluation for the different websites. Conclusions: The quality of the web sites evaluated varied widely. Although there are several websites, which are detailed in the article, with high overall scores

Association of candidate gene polymorphisms with chronic kidney disease : Results of a case-control analysis in the NEFRONA cohort

Chronic kidney disease (CKD) is a major risk factor for end-stage renal disease, cardiovascular disease and premature death. Despite classical clinical risk factors for CKD and some genetic risk factors have been identified, the residual risk observed in prediction models is still high. Therefore, new risk factors need to be identified in order to better predict the risk of CKD in the population. Here, we analyzed the genetic association of 79 SNPs of proteins associated with mineral metabolism disturbances with CKD in a cohort that includes 2,445 CKD cases and 559 controls. Genotyping was performed with matrix assisted laser desorption ionization-time of flight mass spectrometry. We used logistic regression models considering different genetic inheritance models to assess the association of the SNPs with the prevalence of CKD, adjusting for known risk factors. Eight SNPs (rs1126616, rs35068180, rs2238135, rs1800247, rs385564, rs4236, rs2248359, and rs1564858) were associated with CKD even after adjusting by sex, age and race. A model containing five of these SNPs (rs1126616, rs35068180, rs1800247, rs4236, and rs2248359), diabetes and hypertension showed better performance than models considering only clinical risk factors, significantly increasing the area under the curve of the model without polymorphisms. Furthermore, one of the SNPs (the rs2248359) showed an interaction with hypertension, being the risk genotype affecting only hypertensive patients. We conclude that 5 SNPs related to proteins implicated in mineral metabolism disturbances (Osteopontin, osteocalcin, matrix gla protein, matrix metalloprotease 3 and 24 hydroxylase) are associated to an increased risk of suffering CKD

Natural History of MYH7-Related Dilated Cardiomyopathy

BACKGROUND Variants in myosin heavy chain 7 (MYH7) are responsible for disease in 1% to 5% of patients with dilated cardiomyopathy (DCM); however, the clinical characteristics and natural history of MYH7-related DCM are poorly described. OBJECTIVES We sought to determine the phenotype and prognosis of MYH7-related DCM. We also evaluated the influence of variant location on phenotypic expression. METHODS We studied clinical data from 147 individuals with DCM-causing MYH7 variants (47.6% female; 35.6 +/- 19.2 years) recruited from 29 international centers. RESULTS At initial evaluation, 106 (72.1%) patients had DCM (left ventricular ejection fraction: 34.5% +/- 11.7%). Median follow-up was 4.5 years (IQR: 1.7-8.0 years), and 23.7% of carriers who were initially phenotype-negative developed DCM. Phenotypic expression by 40 and 60 years was 46% and 88%, respectively, with 18 patients (16%) first diagnosed at <18 years of age. Thirty-six percent of patients with DCM met imaging criteria for LV noncompaction. During follow-up, 28% showed left ventricular reverse remodeling. Incidence of adverse cardiac events among patients with DCM at 5 years was 11.6%, with 5 (4.6%) deaths caused by end-stage heart failure (ESHF) and 5 patients (4.6%) requiring heart transplantation. The major ventricular arrhythmia rate was low (1.0% and 2.1% at 5 years in patients with DCM and in those with LVEF of <= 35%, respectively). ESHF and major ventricular arrhythmia were significantly lower compared with LMNA-related DCM and similar to DCM caused by TTN truncating variants. CONCLUSIONS MYH7-related DCM is characterized by early age of onset, high phenotypic expression, low left ventricular reverse remodeling, and frequent progression to ESHF. Heart failure complications predominate over ventricular arrhythmias, which are rare. (C) 2022 The Authors. Published by Elsevier on behalf of the American College of Cardiology Foundation

The evolution of the ventilatory ratio is a prognostic factor in mechanically ventilated COVID-19 ARDS patients

Background: Mortality due to COVID-19 is high, especially in patients requiring mechanical ventilation. The purpose of the study is to investigate associations between mortality and variables measured during the first three days of mechanical ventilation in patients with COVID-19 intubated at ICU admission. Methods: Multicenter, observational, cohort study includes consecutive patients with COVID-19 admitted to 44 Spanish ICUs between February 25 and July 31, 2020, who required intubation at ICU admission and mechanical ventilation for more than three days. We collected demographic and clinical data prior to admission; information about clinical evolution at days 1 and 3 of mechanical ventilation; and outcomes. Results: Of the 2,095 patients with COVID-19 admitted to the ICU, 1,118 (53.3%) were intubated at day 1 and remained under mechanical ventilation at day three. From days 1 to 3, PaO2/FiO2 increased from 115.6 [80.0-171.2] to 180.0 [135.4-227.9] mmHg and the ventilatory ratio from 1.73 [1.33-2.25] to 1.96 [1.61-2.40]. In-hospital mortality was 38.7%. A higher increase between ICU admission and day 3 in the ventilatory ratio (OR 1.04 [CI 1.01-1.07], p = 0.030) and creatinine levels (OR 1.05 [CI 1.01-1.09], p = 0.005) and a lower increase in platelet counts (OR 0.96 [CI 0.93-1.00], p = 0.037) were independently associated with a higher risk of death. No association between mortality and the PaO2/FiO2 variation was observed (OR 0.99 [CI 0.95 to 1.02], p = 0.47). Conclusions: Higher ventilatory ratio and its increase at day 3 is associated with mortality in patients with COVID-19 receiving mechanical ventilation at ICU admission. No association was found in the PaO2/FiO2 variation

Search for new particles in events with energetic jets and large missing transverse momentum in proton-proton collisions at root s=13 TeV

A search is presented for new particles produced at the LHC in proton-proton collisions at root s = 13 TeV, using events with energetic jets and large missing transverse momentum. The analysis is based on a data sample corresponding to an integrated luminosity of 101 fb(-1), collected in 2017-2018 with the CMS detector. Machine learning techniques are used to define separate categories for events with narrow jets from initial-state radiation and events with large-radius jets consistent with a hadronic decay of a W or Z boson. A statistical combination is made with an earlier search based on a data sample of 36 fb(-1), collected in 2016. No significant excess of events is observed with respect to the standard model background expectation determined from control samples in data. The results are interpreted in terms of limits on the branching fraction of an invisible decay of the Higgs boson, as well as constraints on simplified models of dark matter, on first-generation scalar leptoquarks decaying to quarks and neutrinos, and on models with large extra dimensions. Several of the new limits, specifically for spin-1 dark matter mediators, pseudoscalar mediators, colored mediators, and leptoquarks, are the most restrictive to date.Peer reviewe

MUSiC : a model-unspecific search for new physics in proton-proton collisions at root s=13TeV

Results of the Model Unspecific Search in CMS (MUSiC), using proton-proton collision data recorded at the LHC at a centre-of-mass energy of 13 TeV, corresponding to an integrated luminosity of 35.9 fb(-1), are presented. The MUSiC analysis searches for anomalies that could be signatures of physics beyond the standard model. The analysis is based on the comparison of observed data with the standard model prediction, as determined from simulation, in several hundred final states and multiple kinematic distributions. Events containing at least one electron or muon are classified based on their final state topology, and an automated search algorithm surveys the observed data for deviations from the prediction. The sensitivity of the search is validated using multiple methods. No significant deviations from the predictions have been observed. For a wide range of final state topologies, agreement is found between the data and the standard model simulation. This analysis complements dedicated search analyses by significantly expanding the range of final states covered using a model independent approach with the largest data set to date to probe phase space regions beyond the reach of previous general searches.Peer reviewe