Comparison of Three Salivary Collection methods to Assess Physiological Markers.

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Interaction of ENSO-driven Flood Variability and Anthropogenic Changes in Driving Channel Evolution: Corryong/ Nariel Creek, Australia

This is an Accepted Manuscript of an article published by Taylor & Francis in Australian Geographer on 03/09/2015, available online: 10.1080/00049182.2015.1048595Understanding the relative contributions of climatic and anthropogenic drivers of channel change are important to inform river management, especially in the context of environmental change. This global debate is especially pertinent in Australia as catchments have been severely altered since recent European settlement, and there is also strong evidence of cyclical climate variability controlling environmental systems. Corryong/Nariel Creek is an ideal setting to further study the interaction between climate and anthropogenic changes on channel evolution as it has experienced both significant periods of flood and drought, controlled by the El Niño Southern Oscillation (ENSO), and extensive anthropogenic changes. Since European settlement the floodplain has been completely cleared, the riparian zone almost entirely invaded by willows, and every reach of the channel has experienced some form of direct channel modification. Through the combined analysis of channel evolution, climate changes and anthropogenic history of the river it was found that both the ENSO-driven climate and anthropogenic drivers are significant, although at different scales of channel change. Significant straightening in response to land clearing in the early twentieth century occurred before any records of direct channel modifications. Following this, most river management works were in response to instabilities created in the clearing period, or to instabilities created by flooding triggering a new phase of instability in reaches which had already undergone stabilisation works. Overall, human activities triggered channel instability via land clearing, and management works since then generally exacerbated erosion during high flows that are driven by climate fluctuations. This research raises the interesting question of whether rivers in Australia have become more responsive to the ENSO cycle since the clearing of catchment and riparian vegetation, or whether the past response to climate variability was different

Effect of supplementation of phytase to diets low in inorganic phosphorus on growth performance and mineralization of broilers

There has been discussion regarding microbial phytase replacing inorganic phosphorus (P) supplementation in broiler diets. Therefore, an experiment was conducted to examine the effect of phytase supplementation on diets low in inorganic P. Ross 308 broilers (n = 288) were fed one of 6 experimental diets in 4 phases. The control diet had 16.20, 10.90, 9.40, and 6.10 g/kg inorganic P in the Starter, Grower 1, Grower 2 and Finisher phase respectively. The remaining diets had 10.50 g/kg inorganic P in the Starter phase. Two of the diets had graded reductions in inorganic P of 5.10, 3.60, and 0.60 g/kg or 2.00, 0.50, and 0.60 g/kg for the Grower 1, Grower 2 and Finisher phase respectively, plus 500 FTU phytase. Three of the diets had inorganic P levels of 0.40, 0.50, and 0.60 g/kg for the Grower 1, Grower 2 and Finisher diets respectively and either 500, 750, or 1,000 FTU phytase. Broiler performance was analyzed at d 10, 20, 26, and 35. On d 35, ileal calcium (Ca) and P digestibility and tibia bone strength, mineralization, and mineral content were analyzed. There were no significant differences between the control diet and diet containing 1,000 FTU phytase and low inorganic P in the grower or finisher diets based on bird performance, tibia strength, and Ca and P digestibility. Birds fed the control diet had significantly higher BWG (P = 0.001), bone strength (P < 0.001) and ash content (P < 0.001) compared to birds fed the diets with 500 FTU or 750 FTU phytase and low inorganic P in the grower and finisher stages. This may be due to incomplete dephosphorylation of the inositol ring of phytate with these doses of phytase, but with 1,000 FTU phytase there was almost complete phosphate hydrolysis of each phytate. This study showed that relying on phytase alone to ensure full supply of P in broiler diets is viable in finisher diets but is not recommended in grower diets unless phytase is supplied at doses of 1,000 FTU or greater

Empirical Evaluation of Bone Extraction Protocols

The application of high-resolution analytical techniques to characterize ancient bone proteins requires clean, efficient extraction to obtain high quality data. Here, we evaluated many different protocols from the literature on ostrich cortical bone and moa cortical bone to evaluate their yield and relative purity using the identification of antibody-antigen complexes on enzyme-linked immunosorbent assay and gel electrophoresis. Moa bone provided an ancient comparison for the effectiveness of bone extraction protocols tested on ostrich bone. For the immunological part of this study, we focused on collagen I, osteocalcin, and hemoglobin because collagen and osteocalcin are the most abundant proteins in the mineralized extracellular matrix and hemoglobin is common in the vasculature. Most of these procedures demineralize the bone first, and then the remaining organics are chemically extracted. We found that the use of hydrochloric acid, rather than ethylenediaminetetraacetic acid, for demineralization resulted in the cleanest extractions because the acid was easily removed. In contrast, the use of ethylenediaminetetraacetic acid resulted in smearing upon electrophoretic separation, possibly indicating these samples were not as pure. The denaturing agents sodium dodecyl sulfate, urea, and guanidine HCl have been used extensively for the solubilization of proteins in non-biomineralized tissue, but only the latter has been used on bone. We show that all three denaturing agents are effective for extracting bone proteins. One additional method tested uses ammonium bicarbonate as a solubilizing buffer that is more appropriate for post-extraction analyses (e.g., proteomics) by removing the need for desalting. We found that both guanidine HCl and ammonium bicarbonate were effective for extracting many bone proteins, resulting in similar electrophoretic patterns. With the increasing use of proteomics, a new generation of scientists are now interested in the study of proteins from not only extant bone but also from ancient bone

Modeling the interactions between river morphodynamics and riparian vegetation

The study of river-riparian vegetation interactions is an important and intriguing research field in geophysics. Vegetation is an active element of the ecological dynamics of a floodplain which interacts with the fluvial processes and affects the flow field, sediment transport, and the morphology of the river. In turn, the river provides water, sediments, nutrients, and seeds to the nearby riparian vegetation, depending on the hydrological, hydraulic, and geomorphological characteristic of the stream. In the past, the study of this complex theme was approached in two different ways. On the one hand, the subject was faced from a mainly qualitative point of view by ecologists and biogeographers. Riparian vegetation dynamics and its spatial patterns have been described and demonstrated in detail, and the key role of several fluvial processes has been shown, but no mathematical models have been proposed. On the other hand, the quantitative approach to fluvial processes, which is typical of engineers, has led to the development of several morphodynamic models. However, the biological aspect has usually been neglected, and vegetation has only been considered as a static element. In recent years, different scientific communities (ranging from ecologists to biogeographers and from geomorphologists to hydrologists and fluvial engineers) have begun to collaborate and have proposed both semiquantitative and quantitative models of river-vegetation interconnections. These models demonstrate the importance of linking fluvial morphodynamics and riparian vegetation dynamics to understand the key processes that regulate a riparian environment in order to foresee the impact of anthropogenic actions and to carefully manage and rehabilitate riparian areas. In the first part of this work, we review the main interactions between rivers and riparian vegetation, and their possible modeling. In the second part, we discuss the semiquantitative and quantitative models which have been proposed to date, considering both multi- and single-thread river

Rules of reengagement: integrating geomorphology into river diversion designs

There are many river diversions around mining pits in Australia. Poor performance of these diversions has led to stricter guidelines for their design, including better appreciation of geomorphic context. The Pilbara region in Western Australia is an area with many open-pit mines and river diversions. There is a poor understanding of the regional watercourses and limited guidelines for the incorporation of geomorphic and environmental elements into river diversion designs. We developed a series of hydrogeomorphic guidelines for headwater channels in the Eastern Pilbara, Western Australia. We undertook a large-scale regional geomorphic analysis of headwater streams, before focusing on the variability in river reach form. Using Structure-from-Motion photogrammetry (SfM), the presence and distribution of channel features were mapped. The result was a high resolution ‘recipe’ or classification of features for a river addressing the natural morphology, roughness contribution and character of natural rivers within the Pilbara. Direct rainfall modelling provided appropriate rainfall flood frequency estimation for these small ungauged catchments. This knowledge was integrated to produce a series of guideline hydraulic criteria for the various headwater channels. These guideline hydraulic criteria can be used to design river diversions, in addition to helping us understand more about the complexity and variability of headwater channels within the Eastern Pilbara. These criteria can also help to set ‘closure criteria’ which specify the conditions that mine owners have to meet to return the mine to public ownership

Caffeine use in the 21st Century: Considerations for public health

Caffeine has been consumed for thousands of years, with the primary sources originally being tea leaves and coffee beans. However, over the past 120 years new caffeinated foods and beverages have been developed and marketed worldwide, which has led to an increase in caffeine consumption in both children and adults. Concomitant with the rise in caffeine consumption has been a rise in the number of caffeine-induced incidents leading to emergency room visits or calls to poison centres. The reasons for the increases in caffeine consumption and related health concerns are likely to be multi-factorial and include aspects such as the wide range of caffeine sources available, the variability in caffeine content between and within products, lack of knowledge by the consumer, compounded by the wide variety of reasons for its consumption. In addition, with the advent of caffeinated products such as energy drinks and ready-to-drink beverages which frequently contain high levels of sugar, alcohol or other stimulatory compounds, adjuvant effects are possible. Life in the 21st century is faster and more competitive than it has ever been, and lifestyles are constantly changing to reflect that. Although consumption of increasingly accessible caffeinated beverages may aid in achieving life’s goals, the question remains as to how this increased consumption may impact on health, particularly in the long term. The aim of this review is to explore the above issues in an effort to raise awareness and stimulate discussion as to future public health concerns.fals