65 research outputs found
Mexican American English in Context: Accommodation to Other Available Norms in Lower Michigan
Recent studies have examined the effects of regional varieties on the English ofMexican Americans outside the Southwest (Hartford 1978; Frazer 1996; Gordon2000; Wolfram, Carter, and Moriello 2004; Roeder 2006). The present study is an examination of the vowel systems of Mexican Americans in two communities in Lower Michigan - the Lansing area, where the Northern Cities Shift (NCS) is afeature of the predominant local dialect, and Berrien County in southwest Michigan,which has not shown extensive NCS influence. The findings reveal a kiteshapedpattern in the lower vowels of the Lansing speakers, which is attributableto a new variety of Mexican American English influenced strongly by tbe NCS.The degree of accommodation to this pattern by Mexican Americans in BerrienCounty - where the Mexican American community is less well established - correlates with their length of residence in the area
The Phonology of the Canadian Shift Revisited: Thunder Bay & Cape Breton
Previous accounts of the Canadian Shift, which have interpreted this diachronic process as a purely phonetic consequence of the low back LOT-THOUGHT vowel merger, have not clearly explained the strong connection between phonetic TRAP vowel retraction and the phonological process of the low back merger. This paper addresses this issue in several ways. Relying on the Modified Contrastive Specification theory (Dresher et al. 1994) and the Contrastive Hierarchy approach (Dresher 2009), two phonological frameworks, as well as phonetic insights from Vowel Dispersion theory (Liljencrants and Lindblom 1972) and Dispersion-Focalization theory (Schwartz et al. 1997, Schwartz et al. 2007), we propose that the catalyst of the Canadian Shift is a three-way merger of the PALM, LOT and THOUGHT lexical sets, in combination with a simultaneous change in the underlying feature specifications of the TRAP vowel. This results in a phonology that allows for the TRAP and DRESS vowels, in particular, to undergo the influence of the phonetic principles of dispersion and focalization, which lead to lowering and retraction in the acoustic vowel space. Comparison of data from speakers in Thunder Bay, Ontario, and Cape Breton, Nova Scotia, lends support to this hypothesis because the Cape Breton data reveals evidence of two concurrent phonological systems, despite no evidence of change over apparent time. Some Cape Breton speakers display the Ontario (i.e., inland Canada) Canadian Shifted vowel system, while others display a system that bears much greater resemblance to the Eastern New England non-shift dialect, where PALM merges with TRAP instead of LOT-THOUGHT. The current analysis thus predicts that the Canadian Shift or a similar change to the TRAP, DRESS, and KIT vowels will occur in any North American dialect where the PALM-LOT-THOUGHT merger occurs, unless an intervening phonological change alters the contrasts within the phonological system
The Lantern Vol. 41, No. 2, Spring 1975
• Awakening • 10:27 • The Box • God\u27s Children • The Blasphemous Bean Beetle Levels Limpidland • First Flight • In April • Butterfly • In the Garden • The Emperor\u27s Pond • The Mob • Date with Destiny • While Awaiting Death • Sweet Jane • Final Thoughtshttps://digitalcommons.ursinus.edu/lantern/1106/thumbnail.jp
Assembling evidence for identifying reservoirs of infection
Many pathogens persist in multihost systems, making the identification of infection reservoirs crucial for devising effective interventions. Here, we present a conceptual framework for classifying patterns of incidence and prevalence, and review recent scientific advances that allow us to study and manage reservoirs simultaneously. We argue that interventions can have a crucial role in enriching our mechanistic understanding of how reservoirs function and should be embedded as quasi-experimental studies in adaptive management frameworks. Single approaches to the study of reservoirs are unlikely to generate conclusive insights whereas the formal integration of data and methodologies, involving interventions, pathogen genetics, and contemporary surveillance techniques, promises to open up new opportunities to advance understanding of complex multihost systems
Pathogenic MAST3 Variants in the STK Domain Are Associated with Epilepsy
Objective: The MAST family of microtubule-associated serine–threonine kinases (STKs) have distinct expression patterns in the developing and mature human and mouse brain. To date, only MAST1 has been conclusively associated with neurological disease, with de novo variants in individuals with a neurodevelopmental disorder, including a mega corpus callosum. Methods: Using exome sequencing, we identify MAST3 missense variants in individuals with epilepsy. We also assess the effect of these variants on the ability of MAST3 to phosphorylate the target gene product ARPP-16 in HEK293T cells. Results: We identify de novo missense variants in the STK domain in 11 individuals, including 2 recurrent variants p.G510S (n = 5) and p.G515S (n = 3). All 11 individuals had developmental and epileptic encephalopathy, with 8 having normal development prior to seizure onset at \u3c2 years of age. All patients developed multiple seizure types, 9 of 11 patients had seizures triggered by fever and 9 of 11 patients had drug-resistant seizures. In vitro analysis of HEK293T cells transfected with MAST3 cDNA carrying a subset of these patient-specific missense variants demonstrated variable but generally lower expression, with concomitant increased phosphorylation of the MAST3 target, ARPP-16, compared to wild-type. These findings suggest the patient-specific variants may confer MAST3 gain-of-function. Moreover, single-nuclei RNA sequencing and immunohistochemistry shows that MAST3 expression is restricted to excitatory neurons in the cortex late in prenatal development and postnatally. Interpretation: In summary, we describe MAST3 as a novel epilepsy-associated gene with a potential gain-of-function pathogenic mechanism that may be primarily restricted to excitatory neurons in the cortex. ANN NEUROL 2021;90:274–284
Sustainability of bioenergy – mapping the risks and benefits to inform future bioenergy systems
Bioenergy is widely included in energy strategies for its GHG mitigation potential. Bioenergy technologies will likely have to be deployed at scale to meet decarbonisation targets, and consequently biomass will have to be increasingly grown/mobilised. Sustainability risks associated with bioenergy may intensify with increasing deployment and where feedstocks are sourced through international trade. This research applies the Bioeconomy Sustainability Indicator Model (BSIM) to map and analyse the performance of bioenergy across 126 sustainability issues, evaluating 16 bioenergy case studies that reflect the breadth of biomass resources, technologies, energy vectors and bio-products. The research finds common trends in sustainability performance across projects that can inform bioenergy policy and decision making. Potential sustainability benefits are identified for People (jobs, skills, income, energy access); for Development (economy, energy, land utilisation); for Natural Systems (soil, heavy metals), and; for Climate Change (emissions, fuels). Also, consistent trends of sustainability risks where focus is required to ensure the viability of bioenergy projects, including for infrastructure, feedstock mobilisation, techno-economics and carbon stocks. Emission mitigation may be a primary objective for bioenergy, this research finds bioenergy projects can provide potential benefits far beyond emissions - there is an argument for supporting projects based on the ecosystem services and/or economic stimulation they may deliver. Also given the broad dynamics and characteristics of bioenergy projects, a rigid approach of assessing sustainability may be incompatible. Awarding ‘credit’ across a broader range of sustainability indicators in addition to requiring minimum performances in key areas, may be more effective at ensuring bioenergy sustainability
Multiple Recurrent De Novo CNVs, Including Duplications of the 7q11.23 Williams Syndrome Region, Are Strongly Associated with Autism
SummaryWe have undertaken a genome-wide analysis of rare copy-number variation (CNV) in 1124 autism spectrum disorder (ASD) families, each comprised of a single proband, unaffected parents, and, in most kindreds, an unaffected sibling. We find significant association of ASD with de novo duplications of 7q11.23, where the reciprocal deletion causes Williams-Beuren syndrome, characterized by a highly social personality. We identify rare recurrent de novo CNVs at five additional regions, including 16p13.2 (encompassing genes USP7 and C16orf72) and Cadherin 13, and implement a rigorous approach to evaluating the statistical significance of these observations. Overall, large de novo CNVs, particularly those encompassing multiple genes, confer substantial risks (OR = 5.6; CI = 2.6–12.0, p = 2.4 × 10-7). We estimate there are 130–234 ASD-related CNV regions in the human genome and present compelling evidence, based on cumulative data, for association of rare de novo events at 7q11.23, 15q11.2-13.1, 16p11.2, and Neurexin 1
Pathogenetics of alveolar capillary dysplasia with misalignment of pulmonary veins.
Alveolar capillary dysplasia with misalignment of pulmonary veins (ACDMPV) is a lethal lung developmental disorder caused by heterozygous point mutations or genomic deletion copy-number variants (CNVs) of FOXF1 or its upstream enhancer involving fetal lung-expressed long noncoding RNA genes LINC01081 and LINC01082. Using custom-designed array comparative genomic hybridization, Sanger sequencing, whole exome sequencing (WES), and bioinformatic analyses, we studied 22 new unrelated families (20 postnatal and two prenatal) with clinically diagnosed ACDMPV. We describe novel deletion CNVs at the FOXF1 locus in 13 unrelated ACDMPV patients. Together with the previously reported cases, all 31 genomic deletions in 16q24.1, pathogenic for ACDMPV, for which parental origin was determined, arose de novo with 30 of them occurring on the maternally inherited chromosome 16, strongly implicating genomic imprinting of the FOXF1 locus in human lungs. Surprisingly, we have also identified four ACDMPV families with the pathogenic variants in the FOXF1 locus that arose on paternal chromosome 16. Interestingly, a combination of the severe cardiac defects, including hypoplastic left heart, and single umbilical artery were observed only in children with deletion CNVs involving FOXF1 and its upstream enhancer. Our data demonstrate that genomic imprinting at 16q24.1 plays an important role in variable ACDMPV manifestation likely through long-range regulation of FOXF1 expression, and may be also responsible for key phenotypic features of maternal uniparental disomy 16. Moreover, in one family, WES revealed a de novo missense variant in ESRP1, potentially implicating FGF signaling in the etiology of ACDMPV
Mutations in KEOPS-Complex Genes Cause Nephrotic Syndrome with Primary Microcephaly
Galloway-Mowat syndrome (GAMOS) is an autosomal-recessive disease characterized by the combination of early-onset nephrotic syndrome (SRNS) and microcephaly with brain anomalies. Here we identified recessive mutations in OSGEP, TP53RK, TPRKB, and LAGE3, genes encoding the four subunits of the KEOPS complex, in 37 individuals from 32 families with GAMOS. CRISPR-Cas9 knockout in zebrafish and mice recapitulated the human phenotype of primary microcephaly and resulted in early lethality. Knockdown of OSGEP, TP53RK, or TPRKB inhibited cell proliferation, which human mutations did not rescue. Furthermore, knockdown of these genes impaired protein translation, caused endoplasmic reticulum stress, activated DNA-damage-response signaling, and ultimately induced apoptosis. Knockdown of OSGEP or TP53RK induced defects in the actin cytoskeleton and decreased the migration rate of human podocytes, an established intermediate phenotype of SRNS. We thus identified four new monogenic causes of GAMOS, describe a link between KEOPS function and human disease, and delineate potential pathogenic mechanisms
- …