Influence of landscape heterogeneity and spatial resolution in multi-temporal in situ and MODIS NDVI data proxies for seasonal GPP dynamics

The objective of this paper was to evaluate the use of in situ normalized difference vegetation index (NDVI) and Moderate Resolution Imaging Spectroradiometer NDVI (NDVI) time series data as proxies for ecosystem gross primary productivity (GPP) to improve GPP upscaling. We used GPP flux data from 21 global FLUXNET sites across main global biomes (forest, grassland, and cropland) and derived MODIS NDVI at contrasting spatial resolutions (between 0.5 × 0.5 km and 3.5 × 3.5 km) centered at flux tower location. The goodness of the relationship between NDVI and NDVI varied across biomes, sites, and MODIS spatial resolutions. We found a strong relationship with a low variability across sites and within year variability in deciduous broadleaf forests and a poor correlation in evergreen forests. Best performances were obtained for the highest spatial resolution at 0.5 × 0.5 km). Both NDVI and NDVI elicited roughly three weeks later the starting of the growing season compared to GPP data. Our results confirm that to improve the accuracy of upscaling in situ data of site GPP seasonal responses, in situ radiation measurement biomes should use larger field of view to sense an area, or more sensors should be placed in the flux footprint area to allow optimal match with satellite sensor pixel size

Assessing ecosystem isoprene emissions by hyperspectral remote sensing

This study examined the relationship between foliar isoprene emissions, light use efficiency and photochemical reflectance index (PRI) throughout the canopy profile and explored the contribution of xanthophyll cycle pigments versus other carotenoid pigments to the isoprene/PRI relationship. Foliar isoprene emissions within the canopy profile were measured in a high-density poplar plantation in Flanders (Belgium) during the 2016 growing season. The results confirmed that PRI was a promising estimator of isoprene emissions at canopy level. Interestingly, xanthophyll cycle pigments contributed more to isoprene biosynthesis than chlorophyll and drove the isoprene/PRI relationship. The simple independent pigment index and novel defined indices, such as the hyperspectral isoprene index and simple hyperspectral isoprene index, showed promising results and could be suitable estimators of isoprene emissions due to their strong relationship with the xanthophyll pool

Effects of land use and climate on carbon and nitrogen pool partitioning in European mountain grasslands

European mountain grasslands are increasingly affected by land-use changes and climate, which have been suggested to exert important controls on grassland carbon (C) and nitrogen (N) pools. However, so far there has been no synthetic study on whether and how land-use changes and climate interactively affect the partitioning of these pools amongst the different grassland compartments. We analyzed the partitioning of C and N pools of 36 European mountain grasslands differing in land-use and climate with respect to above- and belowground phytomass, litter and topsoil (top 23 cm). We found that a reduction of management intensity and the abandonment of hay meadows and pastures increased above-ground phytomass, root mass and litter as well as their respective C and N pools, concurrently decreasing the fractional contribution of the topsoil to the total organic carbon pool. These changes were strongly driven by the cessation of cutting and grazing, a shift in plant functional groups and a related reduction in litter quality. Across all grasslands studied, variation in the impact of land management on the topsoil N pool and C/N-ratio were mainly explained by soil clay content combined with pH. Across the grasslands, below-ground phytomass as well as phytomass- and litter C concentrations were inversely related to the mean annual temperature; furthermore, C/N- ratios of phytomass and litter increased with decreasing mean annual precipitation. Within the topsoil compartment, C concentrations decreased from colder to warmer sites, and increased with increasing precipitation. Climate generally influenced effects of land use on C and N pools mainly through mean annual temperature and less through mean an- nual precipitation. We conclude that site-specific conditions need to be considered for understanding the effects of land use and of current and future climate changes on grassland C and N pools.Peer reviewe

Matching the phenology of net ecosystem exchange and vegetation indices estimated with MODIS and FLUXNET in-situ observations

Shifts in ecosystem phenology play an important role in the definition of inter-annual variability of net ecosystem carbon uptake. A good estimate at the global scale of ecosystem phenology, mainly that of photosynthesis or gross primary productivity (GPP), may be provided by vegetation indices derived from MODIS satellite image data. However, the relationship between the start date of a growing (or greening) season (SGS) when derived from different vegetation indices (VI's), and the starting day of carbon uptake is not well elucidated. Additionally, the validation of existing phenology data with in-situ measurements is largely missing. We have investigated the possibility to use different VI's to predict the starting day of the growing season for 28 FLUXNET sites as well as MODIS data. This analysis included main plant functional types (PFT's). Of all VI's taken into account in this paper, the NDVI (Normalized Difference Vegetation Index) shows the highest correlation coefficient for the relationship between the starting day of the growing season as observed with MODIS and in-situ observations. However, MODIS observations elicit a 20-21 days earlier SGS date compared to in-situ observations. The prediction for the NEE start of the growing season diverges when using different VI's, and seems to depend on the amplitude for carbon and VI and on PFT. The optimal VI for estimation of a SGS date was PFT-specific - for example the WRDVI for cropland, but the MODIS NDVI performed best when applied as an estimator for Net Ecosystem Exchange and when considering all PFT's pooled

A MODIS photochemical reflectance index (PRI) as an estimator of isoprene emissions in a temperate deciduous forest

The quantification of isoprene and monoterpene emissions at the ecosystem level with available models and field measurements is not entirely satisfactory. Remote-sensing techniques can extend the spatial and temporal assessment of isoprenoid fluxes. Detecting the exchange of biogenic volatile organic compounds (BVOCs) using these techniques is, however, a very challenging goal. Recent evidence suggests that a simple remotely sensed index, the photochemical reflectance index (PRI), which is indicative of light-use efficiency, relative pigment levels and excess reducing power, is a good indirect estimator of foliar isoprenoid emissions. We tested the ability of PRI to assess isoprenoid fluxes in a temperate deciduous forest in central USA throughout the entire growing season and under moderate and extreme drought conditions. We compared PRI time series calculated with MODIS bands to isoprene emissions measured with eddy covariance. MODIS PRI was correlated with isoprene emissions for most of the season, until emissions peaked. MODIS PRI was also able to detect the timing of the annual peak of emissions, even when it was advanced in response to drought conditions. PRI is thus a promising index to estimate isoprene emissions when it is complemented by information on potential emission. It may also be used to further improve models of isoprene emission under drought and other stress conditions. Direct estimation of isoprene emission by PRI is, however, limited, because PRI estimates LUE, and the relationship between LUE and isoprene emissions can be modified by severe stress conditions

Ground-Based Optical Measurements at European Flux Sites: A Review of Methods, Instruments and Current Controversies

This paper reviews the currently available optical sensors, their limitations and opportunities for deployment at Eddy Covariance (EC) sites in Europe. This review is based on the results obtained from an online survey designed and disseminated by the Co-cooperation in Science and Technology (COST) Action ESO903—“Spectral Sampling Tools for Vegetation Biophysical Parameters and Flux Measurements in Europe” that provided a complete view on spectral sampling activities carried out within the different research teams in European countries. The results have highlighted that a wide variety of optical sensors are in use at flux sites across Europe, and responses further demonstrated that users were not always fully aware of the key issues underpinning repeatability and the reproducibility of their spectral measurements. The key findings of this survey point towards the need for greater awareness of the need for standardisation and development of a common protocol of optical sampling at the European EC sites

Impacts of global change on Mediterranean forests and their services

The increase in aridity, mainly by decreases in precipitation but also by higher temperatures, is likely the main threat to the diversity and survival of Mediterranean forests. Changes in land use, including the abandonment of extensive crop activities, mainly in mountains and remote areas, and the increases in human settlements and demand for more resources with the resulting fragmentation of the landscape, hinder the establishment of appropriate management tools to protect Mediterranean forests and their provision of services and biodiversity. Experiments and observations indicate that if changes in climate, land use and other components of global change, such as pollution and overexploitation of resources, continue, the resilience of many forests will likely be exceeded, altering their structure and function and changing, mostly decreasing, their capacity to continue to provide their current services. A consistent assessment of the impacts of the changes, however,remains elusive due to the difficulty of obtaining simultaneous and complete data for all scales of the impacts in the same forests, areas and regions. We review the impacts of climate change and other components of global change and their interactions on the terrestrial forests of Mediterranean regions, with special attention to their impacts on ecosystem services. Management tools for counteracting the negative effects of global change on Mediterranean ecosystem- services are finally discussed

Interpreting canopy development and physiology using the EUROPhen camera network at flux sites

Peer reviewe