Investigating the cryptogenic status of the sea squirt Didemnum perlucidum (Tunicata, Ascidiacea) in Australia based on a molecular study of its global distribution

Didemnid species are assessed as species with a high invasive potential for Australia and as such are listed as target species for both state and national monitoring programs. The presence of the sea squirt Didemnum perlucidum (Monniot, 1983) was first documented in Australia in 2010 and has since then been detected extensively throughout the state of Western Australia and in the Northern Territory. These detections have raised important questions as to the origin and potential impact of this species in Australia. The current study was initiated to review the current known global geographic range of D. perlucidum and to obtain specimens that could support molecular studies aimed at evaluating the potential origin of this species in Australia. Characterization of 5’ COI mitochondrial sequences from 286 specimens revealed a remarkably low level of genetic diversity across the current known range of D. perlucidum and the existence of one main widespread genetic haplotype. Such findings suggest that all locations sampled in this study may in fact represent introductions of D. perlucidum and that the natural native range of the species remains unknown. Our demonstration that specimens (n=187) originating from across a broad expanse of the Australian West Coast were comprised of a single haplotype also lends support to the hypothesis that D. perlucidum is a species that has been introduced recently into Australia. This hypothesis is supported by the fact that D. perlucium distribution in Australia is mostly confined to artificial structures, it has displayed invasive characteristics, and its presence is now being detected across an increasingly wide geographical area. Given the demonstrated low level of genetic COI variation across its known global distribution, lack of clarity around its native range, and limited availability of data on this species globally, we recognize the requirement for further work to more fully elucidate the exact origins and patterns of distribution of D. perlucidum in Australia. This study represents the most comprehensive mapping of the current global distribution of D. perlucidum conducted to date and will hopefully motivate further studies aimed at elucidating this species biology, origin, high-risk routes and impacts

Contourite depositional system after the exit of a strait: Case study from the late Miocene South Rifian Corridor, Morocco

Idealized facies of bottom current deposits (contourites) have been established for fine-grained contourite drifts in modern deep-marine sedimentary environments. Their equivalent facies in the ancient record however are only scarcely recognized due to the weathered nature of most fine-grained deposits in outcrop. Facies related to the erosional elements (i.e. contourite channels) of contourite depositional systems have not yet been properly established and related deposits in outcrop appear non-existent. To better understand the sedimentary facies and facies sequences of contourites, the upper Miocene contourite depositional systems of the South Rifian Corridor (Morocco) is investigated. This contourite depositional system formed by the dense palaeo-Mediterranean Outflow Water. Foraminifera assemblages were used for age-constraints (7.51 to 7.35 Ma) and to determine the continental slope depositional domains. Nine sedimentary facies have been recognized based on lithology, grain-size, sedimentary structures and biogenic structures. These facies were subsequently grouped into five facies associations related to the main interpreted depositional processes (hemipelagic settling, contour currents and gravity flows). The vertical sedimentary facies succession records the tectonically induced, southward migration of the contourite depositional systems and the intermittent behaviour of the palaeo-Mediterranean Outflow Water, which is mainly driven by precession and millennial-scale climate variations. Tides substantially modulated the palaeo-Mediterranean Outflow Water on a sub-annual scale. This work shows exceptional examples of muddy and sandy contourite deposits in outcrop by which a facies distribution model from the proximal continental slope, the contourite channel to its adjacent contourite drift, is proposed. This model serves as a reference for contourite recognition both in modern environments and the ancient record. Furthermore, by establishing the hydrodynamics of overflow behaviour a framework is provided that improves process-based interpretation of deep-water bottom current deposits

Risk profiles and one-year outcomes of patients with newly diagnosed atrial fibrillation in India: Insights from the GARFIELD-AF Registry.

BACKGROUND: The Global Anticoagulant Registry in the FIELD-Atrial Fibrillation (GARFIELD-AF) is an ongoing prospective noninterventional registry, which is providing important information on the baseline characteristics, treatment patterns, and 1-year outcomes in patients with newly diagnosed non-valvular atrial fibrillation (NVAF). This report describes data from Indian patients recruited in this registry. METHODS AND RESULTS: A total of 52,014 patients with newly diagnosed AF were enrolled globally; of these, 1388 patients were recruited from 26 sites within India (2012-2016). In India, the mean age was 65.8 years at diagnosis of NVAF. Hypertension was the most prevalent risk factor for AF, present in 68.5% of patients from India and in 76.3% of patients globally (P < 0.001). Diabetes and coronary artery disease (CAD) were prevalent in 36.2% and 28.1% of patients as compared with global prevalence of 22.2% and 21.6%, respectively (P < 0.001 for both). Antiplatelet therapy was the most common antithrombotic treatment in India. With increasing stroke risk, however, patients were more likely to receive oral anticoagulant therapy [mainly vitamin K antagonist (VKA)], but average international normalized ratio (INR) was lower among Indian patients [median INR value 1.6 (interquartile range {IQR}: 1.3-2.3) versus 2.3 (IQR 1.8-2.8) (P < 0.001)]. Compared with other countries, patients from India had markedly higher rates of all-cause mortality [7.68 per 100 person-years (95% confidence interval 6.32-9.35) vs 4.34 (4.16-4.53), P < 0.0001], while rates of stroke/systemic embolism and major bleeding were lower after 1 year of follow-up. CONCLUSION: Compared to previously published registries from India, the GARFIELD-AF registry describes clinical profiles and outcomes in Indian patients with AF of a different etiology. The registry data show that compared to the rest of the world, Indian AF patients are younger in age and have more diabetes and CAD. Patients with a higher stroke risk are more likely to receive anticoagulation therapy with VKA but are underdosed compared with the global average in the GARFIELD-AF. CLINICAL TRIAL REGISTRATION-URL: http://www.clinicaltrials.gov. Unique identifier: NCT01090362

Comparative plant growth promoting traits and distribution of rhizobacteria associated with heavy metals in contaminated soils

The heavy metals at high concentration are generally toxic to the plants for their metabolism and growth; therefore, interactions among metals, rhizosphere microbes and plants have attracted attention because of the biotechnological potential of microorganisms for metal removal directly from contaminated soils or the possible transference of them to the plants. The aim of this study was to compare the relationships between the physiological in vitro characteristics of rhizobacteria isolated from plant metal accumulators and their distribution relating with the heavy metals content in contaminated soils. The results of this study showed that the heavy metals present in the rhizosphere of the plant species analyzed, decrease the microbial biomass and content of heavy metals caused a different distribution of rhizobacteria found. Gram negative rhizobacteria (90%) and gram positive rhizobacteria (10%) were isolated; all of them are metal-resistant rhizobacteria and 50% of the isolated rhizobacteria possess both traits: higher indol acetic acid and siderophore producers. The inoculation with these rhizosphere microorganisms that possess metal-tolerating ability and plant growth promoting activities, can be recommended with a practical importance for both metal-contaminated environment and plant growth promotion

Study of the adsorption-desorption of Cu2+, Cd2+ and Zn2+ in single and binary aqueous solutions using oxygenated carbons prepared by Microwave Technology

In the present work was studied the adsorption-desorption of heavy metals from aqueous solutions using carbonaceous materials prepared with a technology that combines radiant and microwave heating. Three optimum carbons O-Cu, O-Cd and O-Zn were prepared and characterized using elemental analysis, potentiometric titration, nitrogen adsorption isotherms at - 196 °C, SEM/EDX analysis, and temperature programmed desorption (TPD). The three optimum carbons had very high oxygen contents mainly ascribed to surface functional groups of acidic nature. In contrast, the porosity of the carbons was very limited with specific surface areas being < 50 m2/g. Liquid adsorption isotherms were carried out and capacities of the three optimum carbons were 67, 26 and 24 mg/g for Cu2 +, Cd2 + and Zn2 +, respectively. The higher capacity of the O-Cu carbon was explained in terms of the higher electronegativity of metallic Cu and the theory of hard and soft acids and bases (HSAB) defined by Pearson, when compared with both Cd and Zn atoms. Additionally, the desorption percentage of heavy metals was lower than 10%

Effectiveness of the combination elvitegravir/cobicistat/tenofovir/emtricitabine (EVG/COB/TFV/FTC) plus darunavir among treatment-experienced patients in clinical practice : A multicentre cohort study

Background: The aim of this study was to investigate the effectiveness and tolerability of the combination elvitegravir/cobicistat/tenofovir/emtricitabine plus darunavir (EVG/COB/TFV/FTC + DRV) in treatment-experienced patients from the cohort of the Spanish HIV/AIDS Research Network (CoRIS). Methods: Treatment-experienced patients starting treatment with EVG/COB/TFV/FTC + DRV during the years 2014-2018 and with more than 24 weeks of follow-up were included. TFV could be administered either as tenofovir disoproxil fumarate or tenofovir alafenamide. We evaluated virological response, defined as viral load (VL) < 50 copies/ml and < 200 copies/ml at 24 and 48 weeks after starting this regimen, stratified by baseline VL (< 50 or ≥ 50 copies/ml at the start of the regimen). Results: We included 39 patients (12.8% women). At baseline, 10 (25.6%) patients had VL < 50 copies/ml and 29 (74.4%) had ≥ 50 copies/ml. Among patients with baseline VL < 50 copies/ml, 85.7% and 80.0% had VL < 50 copies/ml at 24 and 48 weeks, respectively, and 100% had VL < 200 copies/ml at 24 and 48 weeks. Among patients with baseline VL ≥ 50 copies/ml, 42.3% and 40.9% had VL < 50 copies/ml and 69.2% and 68.2% had VL < 200 copies/ml at 24 and 48 weeks. During the first 48 weeks, no patients changed their treatment due to toxicity, and 4 patients (all with baseline VL ≥ 50 copies/ml) changed due to virological failure. Conclusions: EVG/COB/TFV/FTC + DRV was well tolerated and effective in treatment-experienced patients with undetectable viral load as a simplification strategy, allowing once-daily, two-pill regimen with three antiretroviral drug classes. Effectiveness was low in patients with detectable viral loads