Blind fluorescence structured illumination microscopy: A new reconstruction strategy

In this communication, a fast reconstruction algorithm is proposed for fluorescence \textit{blind} structured illumination microscopy (SIM) under the sample positivity constraint. This new algorithm is by far simpler and faster than existing solutions, paving the way to 3D and/or real-time 2D reconstruction.Comment: submitted to IEEE ICIP 201

Multiple effects of silymarin on the hepatitis C virus lifecycle

Silymarin, an extract from milk thistle (Silybum marianum), and its purified flavonolignans have been recently shown to inhibit hepatitis C virus (HCV) infection, both in vitro and in vivo. In the current study, we further characterized silymarin's antiviral actions. Silymarin had antiviral effects against hepatitis C virus cell culture (HCVcc) infection that included inhibition of virus entry, RNA and protein expression, and infectious virus production. Silymarin did not block HCVcc binding to cells but inhibited the entry of several viral pseudoparticles (pp), and fusion of HCVpp with liposomes. Silymarin but not silibinin inhibited genotype 2a NS5B RNA-dependent RNA polymerase (RdRp) activity at concentrations 5 to 10 times higher than required for anti-HCVcc effects. Furthermore, silymarin had inefficient activity on the genotype 1b BK and four 1b RDRPs derived from HCV-infected patients. Moreover, silymarin did not inhibit HCV replication in five independent genotype 1a, 1b, and 2a replicon cell lines that did not produce infectious virus. Silymarin inhibited microsomal triglyceride transfer protein activity, apolipoprotein B secretion, and infectious virion production into culture supernatants. Silymarin also blocked cell-to-cell spread of virus. CONCLUSION: Although inhibition of in vitro NS5B polymerase activity is demonstrable, the mechanisms of silymarin's antiviral action appear to include blocking of virus entry and transmission, possibly by targeting the host cell

A New Approach for Designing Orthogonal Wavelets for Multicarrier Applications

yesThe Daubechies, coiflet and symlet wavelets, with properties of orthogonal wavelets are suitable for multicarrier transmission over band-limited channels. It has been shown that similar wavelets can be constructed by Lagrange approximation interpolation. In this work and using established wavelet design algorithms, it is shown that ideal filters can be approximated to construct new orthogonal wavelets. These new wavelets, in terms of BER behave slightly better than the wavelets mentioned above, and much better than biorthogonal wavelets, in multipath channels with additive white Gaussian noise (AWGN). It is shown that the construction, which uses a simple simultaneous solution to obtain the wavelet filters from the ideal filters based on established wavelet design algorithms, is simple and can easily be reproduced

The hand of Homo naledi

A nearly complete right hand of an adult hominin was recovered from the Rising Star cave system, South Africa. Based on associated hominin material, the bones of this hand are attributed to Homo naledi. This hand reveals a long, robust thumb and derived wrist morphology that is shared with Neandertals and modern humans, and considered adaptive for intensified manual manipulation. However, the finger bones are longer and more curved than in most australopiths, indicating frequent use of the hand during life for strong grasping during locomotor climbing and suspension. These markedly curved digits in combination with an otherwise human-like wrist and palm indicate a significant degree of climbing, despite the derived nature of many aspects of the hand and other regions of the postcranial skeleton in H. naledi

The burden of neglected tropical diseases in Ethiopia, and opportunities for integrated control and elimination

Background: Neglected tropical diseases (NTDs) are a group of chronic parasitic diseases and related conditions that are the most common diseases among the 2·7 billion people globally living on less than US$2 per day. In response to the growing challenge of NTDs, Ethiopia is preparing to launch a NTD Master Plan. The purpose of this review is to underscore the burden of NTDs in Ethiopia, highlight the state of current interventions, and suggest ways forward. Results: This review indicates that NTDs are significant public health problems in Ethiopia. From the analysis reported here, Ethiopia stands out for having the largest number of NTD cases following Nigeria and the Democratic Republic of Congo. Ethiopia is estimated to have the highest burden of trachoma, podoconiosis and cutaneous leishmaniasis in sub-Saharan Africa (SSA), the second highest burden in terms of ascariasis, leprosy and visceral leishmaniasis, and the third highest burden of hookworm. Infections such as schistosomiasis, trichuriasis, lymphatic filariasis and rabies are also common. A third of Ethiopians are infected with ascariasis, one quarter is infected with trichuriasis and one in eight Ethiopians lives with hookworm or is infected with trachoma. However, despite these high burdens of infection, the control of most NTDs in Ethiopia is in its infancy. In terms of NTD control achievements, Ethiopia reached the leprosy elimination target of 1 case/10,000 population in 1999. No cases of human African trypanosomiasis have been reported since 1984. Guinea worm eradication is in its final phase. The Onchocerciasis Control Program has been making steady progress since 2001. A national blindness survey was conducted in 2006 and the trachoma program has kicked off in some regions. Lymphatic Filariasis, podoconiosis and rabies mapping are underway. Conclusion: Ethiopia bears a significant burden of NTDs compared to other SSA countries. To achieve success in integrated control of NTDs, integrated mapping, rapid scale up of interventions and operational research into co implementation of intervention packages will be crucial

Regression Analysis for Interval-Valued Data

In dit paper worden verschillende regressiemethoden uitgevoerd op symbolische data om vervolgens te oordelen welke methode het meest betrouwbaar is. De data is herschikt in de vorm van intervallen en middelpunten. Hierop werden Deming Regressie en middelpuntsregressie toegepast. De regressiemethode waarbij gebruik wordt gemaakt van empirische, symbolische statistieken (Covariantie-Regressie) geven de laagste standaarderrors in vergelijking met de eerder benoemde regressiemethoden. Om de standaarderrors te verkrijgen zijn er steekproeftrekkingen gegenereerd uit de data. Uit de resultaten valt af te leiden dat Deming Regressie minder presteert dan de andere regressiemethoden die overigens erg veel overeenkomsten vertonen in hun resultaten. Keywords: symbolic data, linear regression, bootstrap sampling, standard error, (co-)variance, parameter estimation

Neuropsychological diagnostics in Ethiopia - challenges and chances among considerations regarding differential diagnosis (literature overview)

Background Neuropsychological tests can provide crucial information regarding the consideration of psychiatric differential diagnosis. This is especially important in developing countries like Ethiopia where advanced imaging is not widely available.Methods A detailed literature search was conducted using the search engines Pubmed, Science Direct, Web of Science and Google Scholar from February 2013 until May 2014. Selecting the identified studies pragmatically depending on the content, twenty-six studies were included.Results The administration of tests developed in Western-European settings to the African culture presents enormous challenge. Among these are especially the influence of low level of literacy, familiarity with the testing material, cultural aspects regarding social behavior and sense of time, cultural differences regarding cognitive functions and lack of norms. At the same time, there are opportunities for different fields of application, especially when considering the diagnosis of dementia and in the assessment of frontal lobe lesions. Assessment of cognitive flexibility appears to be an important way to differentiate between affective disorders and schizophrenia.Conclusions In conclusion, we suggest a „basic set of neuropsychological tests“ for application in psychiatric facilities in low income countries like Ethiopia, which mostly includes nonverbal tests. By using these tests, some of the challenges found during the literature search can be overcome. Additionally, they might provide extra information for diagnostic issues. However, they might have to be adapted to the Ethiopian culture.Key words: Cognition; Culture-fair; Ethiopian; Low-Income; Neuropsychology; Psychiatr

System Identification Based Proxy Model of a Reservoir under Water Injection

Simulation of numerical reservoir models with thousands and millions of grid blocks may consume a significant amount of time and effort, even when high performance processors are used. In cases where the simulation runs are required for sensitivity analysis, dynamic control, and optimization, the act needs to be repeated several times by continuously changing parameters. This makes it even more time-consuming. Currently, proxy models that are based on response surface are being used to lessen the time required for running simulations during sensitivity analysis and optimization. Proxy models are lighter mathematical models that run faster and perform in place of heavier models that require large computations. Nevertheless, to acquire data for modeling and validation and develop the proxy model itself, hundreds of simulation runs are required. In this paper, a system identification based proxy model that requires only a single simulation run and a properly designed excitation signal was proposed and evaluated using a benchmark case study. The results show that, with proper design of excitation signal and proper selection of model structure, system identification based proxy models are found to be practical and efficient alternatives for mimicking the performance of numerical reservoir models. The resulting proxy models have potential applications for dynamic well control and optimization