87 research outputs found

    An Analysis of the Production Output Difference Between an 11-pica and a 15-pica Line Width

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    Considerable research has been done on newspapers in the areas of type sizes, typefaces, leading between lines, readability, legibility and column widths. Tinker and Paterson conducted another study to determine the influence of line width and leading on the speed of reading 9-point type. The results indicate that optimal rate of reading occurs with line widths of 14 to 30 picas and with 1 to 4 pints leading. The Tinker and Paterson studies dealt with reading speed, the Murphy study concerned the proportion of readers who actually read the stories in the alternate forms, and the Hvistendahl study concerned reader estimates of attractiveness and reading speed of type set in two widths. This study deals with the typesetting speed, or the actual amount of written material that can be composed by a line-casting machine operator in two different column widths in a given period of time. It is also the objective of this study to determine the differences in hyphenation between the two measures, and the difference in words set per 100 ems between the two measures, and the difference in words set per 100 ems between the two measures, if such differences exist. Today many newspapers try to reduce typesetting costs by using Linotypes operated automatically by perforated tapes. This operation however, involves an extra step because someone must first punch the tape on another machine, the Tele typesetter perforator. The reason for choosing 15 picas as an ideal column width to compare against the 11-pica column is that The Wall Street Journal and The National Observer are both set on the wider measure

    Large-scale structure of time evolving citation networks

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    In this paper we examine a number of methods for probing and understanding the large-scale structure of networks that evolve over time. We focus in particular on citation networks, networks of references between documents such as papers, patents, or court cases. We describe three different methods of analysis, one based on an expectation-maximization algorithm, one based on modularity optimization, and one based on eigenvector centrality. Using the network of citations between opinions of the United States Supreme Court as an example, we demonstrate how each of these methods can reveal significant structural divisions in the network, and how, ultimately, the combination of all three can help us develop a coherent overall picture of the network's shape.Comment: 10 pages, 6 figures; journal names for 4 references fixe

    Node similarity within subgraphs of protein interaction networks

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    We propose a biologically motivated quantity, twinness, to evaluate local similarity between nodes in a network. The twinness of a pair of nodes is the number of connected, labeled subgraphs of size n in which the two nodes possess identical neighbours. The graph animal algorithm is used to estimate twinness for each pair of nodes (for subgraph sizes n=4 to n=12) in four different protein interaction networks (PINs). These include an Escherichia coli PIN and three Saccharomyces cerevisiae PINs -- each obtained using state-of-the-art high throughput methods. In almost all cases, the average twinness of node pairs is vastly higher than expected from a null model obtained by switching links. For all n, we observe a difference in the ratio of type A twins (which are unlinked pairs) to type B twins (which are linked pairs) distinguishing the prokaryote E. coli from the eukaryote S. cerevisiae. Interaction similarity is expected due to gene duplication, and whole genome duplication paralogues in S. cerevisiae have been reported to co-cluster into the same complexes. Indeed, we find that these paralogous proteins are over-represented as twins compared to pairs chosen at random. These results indicate that twinness can detect ancestral relationships from currently available PIN data.Comment: 10 pages, 5 figures. Edited for typos, clarity, figures improved for readabilit

    On the Complexity of Newman's Community Finding Approach for Biological and Social Networks

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    Given a graph of interactions, a module (also called a community or cluster) is a subset of nodes whose fitness is a function of the statistical significance of the pairwise interactions of nodes in the module. The topic of this paper is a model-based community finding approach, commonly referred to as modularity clustering, that was originally proposed by Newman and has subsequently been extremely popular in practice. Various heuristic methods are currently employed for finding the optimal solution. However, the exact computational complexity of this approach is still largely unknown. To this end, we initiate a systematic study of the computational complexity of modularity clustering. Due to the specific quadratic nature of the modularity function, it is necessary to study its value on sparse graphs and dense graphs separately. Our main results include a (1+\eps)-inapproximability for dense graphs and a logarithmic approximation for sparse graphs. We make use of several combinatorial properties of modularity to get these results. These are the first non-trivial approximability results beyond the previously known NP-hardness results.Comment: Journal of Computer and System Sciences, 201

    Uncovering missing links with cold ends

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    To evaluate the performance of prediction of missing links, the known data are randomly divided into two parts, the training set and the probe set. We argue that this straightforward and standard method may lead to terrible bias, since in real biological and information networks, missing links are more likely to be links connecting low-degree nodes. We therefore study how to uncover missing links with low-degree nodes, namely links in the probe set are of lower degree products than a random sampling. Experimental analysis on ten local similarity indices and four disparate real networks reveals a surprising result that the Leicht-Holme-Newman index [E. A. Leicht, P. Holme, and M. E. J. Newman, Phys. Rev. E 73, 026120 (2006)] performs the best, although it was known to be one of the worst indices if the probe set is a random sampling of all links. We further propose an parameter-dependent index, which considerably improves the prediction accuracy. Finally, we show the relevance of the proposed index on three real sampling methods.Comment: 16 pages, 5 figures, 6 table

    Graph Metrics for Temporal Networks

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    Temporal networks, i.e., networks in which the interactions among a set of elementary units change over time, can be modelled in terms of time-varying graphs, which are time-ordered sequences of graphs over a set of nodes. In such graphs, the concepts of node adjacency and reachability crucially depend on the exact temporal ordering of the links. Consequently, all the concepts and metrics proposed and used for the characterisation of static complex networks have to be redefined or appropriately extended to time-varying graphs, in order to take into account the effects of time ordering on causality. In this chapter we discuss how to represent temporal networks and we review the definitions of walks, paths, connectedness and connected components valid for graphs in which the links fluctuate over time. We then focus on temporal node-node distance, and we discuss how to characterise link persistence and the temporal small-world behaviour in this class of networks. Finally, we discuss the extension of classic centrality measures, including closeness, betweenness and spectral centrality, to the case of time-varying graphs, and we review the work on temporal motifs analysis and the definition of modularity for temporal graphs.Comment: 26 pages, 5 figures, Chapter in Temporal Networks (Petter Holme and Jari Saram\"aki editors). Springer. Berlin, Heidelberg 201

    Effect of correlations on network controllability

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    A dynamical system is controllable if by imposing appropriate external signals on a subset of its nodes, it can be driven from any initial state to any desired state in finite time. Here we study the impact of various network characteristics on the minimal number of driver nodes required to control a network. We find that clustering and modularity have no discernible impact, but the symmetries of the underlying matching problem can produce linear, quadratic or no dependence on degree correlation coefficients, depending on the nature of the underlying correlations. The results are supported by numerical simulations and help narrow the observed gap between the predicted and the observed number of driver nodes in real networks

    Suppressing cascades of load in interdependent networks

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    Understanding how interdependence among systems affects cascading behaviors is increasingly important across many fields of science and engineering.Inspired by cascades of load shedding in coupled electric grids and other infrastructure, we study the Bak-Tang-Wiesenfeld sandpile model on modular random graphs and on graphs based on actual, interdependent power grids. Starting from two isolated networks, adding some connectivity between them is beneficial, for it suppresses the largest cascades in each system. Too much interconnectivity, however, becomes detrimental for two reasons. First, interconnections open pathways for neighboring networks to inflict large cascades. Second, as in real infrastructure, new interconnections increase capacity and total possible load, which fuels even larger cascades. Using a multitype branching process and simulations we show these effects and estimate the optimal level of interconnectivity that balances their tradeoffs. Such equilibria could allow, for example, power grid owners to minimize the largest cascades in their grid. We also show that asymmetric capacity among interdependent networks affects the optimal connectivity that each prefers and may lead to an arms race for greater capacity. Our multitype branching process framework provides building blocks for better prediction of cascading processes on modular random graphs and on multi-type networks in general.Comment: Accepted to PNAS Plus. Author summary: 2 pages, 1 figure. Main paper: 13 pages, 7 figures. Supporting information: 7 pages, 10 figure

    Emergence of scale-free close-knit friendship structure in online social networks

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    Despite the structural properties of online social networks have attracted much attention, the properties of the close-knit friendship structures remain an important question. Here, we mainly focus on how these mesoscale structures are affected by the local and global structural properties. Analyzing the data of four large-scale online social networks reveals several common structural properties. It is found that not only the local structures given by the indegree, outdegree, and reciprocal degree distributions follow a similar scaling behavior, the mesoscale structures represented by the distributions of close-knit friendship structures also exhibit a similar scaling law. The degree correlation is very weak over a wide range of the degrees. We propose a simple directed network model that captures the observed properties. The model incorporates two mechanisms: reciprocation and preferential attachment. Through rate equation analysis of our model, the local-scale and mesoscale structural properties are derived. In the local-scale, the same scaling behavior of indegree and outdegree distributions stems from indegree and outdegree of nodes both growing as the same function of the introduction time, and the reciprocal degree distribution also shows the same power-law due to the linear relationship between the reciprocal degree and in/outdegree of nodes. In the mesoscale, the distributions of four closed triples representing close-knit friendship structures are found to exhibit identical power-laws, a behavior attributed to the negligible degree correlations. Intriguingly, all the power-law exponents of the distributions in the local-scale and mesoscale depend only on one global parameter -- the mean in/outdegree, while both the mean in/outdegree and the reciprocity together determine the ratio of the reciprocal degree of a node to its in/outdegree.Comment: 48 pages, 34 figure

    Small- and large-scale network structure of live fish movements in Scotland

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    Networks are increasingly being used as an epidemiological tool for studying the potential for disease transmission through animal movements in farming industries. We analysed the network of live fish movements for commercial salmonids in Scotland in 2003. This network was found to have a mixture of features both aiding and hindering disease transmission, hindered by being fragmented, with comparatively low mean number of connections (2.83), and low correlation between inward and outward connections (0.12), with moderate variance in these numbers (coefficients of dispersion of 0.99 and 3.12 for in and out respectively); but aided by low levels of clustering (0.060) and some non-random mixing (coefficient of assortativity of 0.16). Estimated inter-site basic reproduction number R0 did not exceed 2.4 at high transmission rate. The network was strongly organised into communities, resulting in a high modularity index (0.82). Arc (directed connection) removal indicated that effective surveillance of a small number of connections may facilitate a large reduction in the potential for disease spread within the industry. Useful criteria for identification of these important arcs included degree- and betweenness-based measures that could in future prove useful for prioritising surveillance
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