22 research outputs found

    How farmers perceive perennial weeds in Northern France and Eastern Germany

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    European farmers are required to follow the transition towards sustainable agriculture and food systems. Perennial weed management without chemical herbicides and inversion tillage is challenging farmers. Questions arise to cope with these spreading weeds. Our study focuses on farmers’ perceptions and experiences of perennial weeds and their control in Northern France and Eastern Germany. A survey was developed to explore the situation regarding present concerns and future problems for perennial weed control. The survey conducted from winter 2020/21 to spring 2021 targeted conventional, conservation and organic farms. We found a high level of awareness for perennial weeds. On average, 80.0% of Northern French farmers and 65.9% of Eastern German farmers revealed present concerns about perennial weeds. Both, Northern French and Eastern German farmers perceived perennial weeds are more damaging to crop production than other pests. In both regions, the farmers considered Cirsium arvense (L.) Scop. as the most important perennial weed. While the majority of the Eastern German farmers observed field infestations of Elymus repens (L.) Gould, Northern French farmers more often reported Sonchus arvensis L. infestations. More than 50% of the farmers stated Rumex spp. infestations in Northern France and Eastern Germany. Interestingly, Eastern German farmers are more concerned about future perennial weed problems than Northern French farmers. The reasons for farmer’s future concerns are probably connected to the farming system. In both regions, conservation and conventional farmers heavily rely on herbicides for perennial weed control, however, more farms used the active ingredient glyphosate in Eastern Germany. Nonetheless, perennial weed control is a major concern for organic farmers in both regions. We conclude that optimizing and integrating non-chemical alternatives is promising in all farming systems. Research activities are required to provide farmers and extension services with novel and profitable perennial weed management practices

    High clustering of acute HCV infections and high rate of associated STIs among Parisian HIV-positive male patients.

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    BACKGROUND: Increasing incidence of hepatitis C virus (HCV) infection in human immunodeficiency virus (HIV)-positive men having sex with men (MSM) has been described in recent years. Phylogenetic analyses of acute HCV infections were undertaken to characterize the dynamics during the epidemic in Paris, and associated sexually transmitted infections (STIs) were evaluated. METHODS: Sanger sequencing of polymerase gene was performed. Maximum likelihood phylogenies were reconstructed using FastTree 2.1 under a GTR+CAT model. Transmission chains were defined as clades with a branch probability ≥0.80 and intraclade genetic distances <0.02 nucleotide substitutions per sites. STIs detected ≤1 month before HCV diagnosis were considered. RESULTS: Among the 85 studied patients, at least 81.2% were MSM. Respectively, 47.6%, 39.0%, 11.0% and 2.4% were infected with genotypes 1a, 4d, 3a and 2k. At least 91.8% were co-infected with HIV. HCV re-infection was evidenced for 24.7% of patients and STIs for 20.0% of patients. Twenty-two transmission chains were identified, including 52 acute hepatitis C (11 pairs and 11 clusters from three to seven patients). CONCLUSIONS: These results revealed strong clustering of acute HCV infections. Thus, rapid treatment of both chronic and acute infections is needed among this population to decrease the prevalence of HCV, in combination with preventive behavioural interventions

    Crop pests and predators exhibit inconsistent responses to surrounding landscape composition

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    The idea that noncrop habitat enhances pest control and represents a win–win opportunity to conserve biodiversity and bolster yields has emerged as an agroecological paradigm. However, while noncrop habitat in landscapes surrounding farms sometimes benefits pest predators, natural enemy responses remain heterogeneous across studies and effects on pests are inconclusive. The observed heterogeneity in species responses to noncrop habitat may be biological in origin or could result from variation in how habitat and biocontrol are measured. Here, we use a pest-control database encompassing 132 studies and 6,759 sites worldwide to model natural enemy and pest abundances, predation rates, and crop damage as a function of landscape composition. Our results showed that although landscape composition explained significant variation within studies, pest and enemy abundances, predation rates, crop damage, and yields each exhibited different responses across studies, sometimes increasing and sometimes decreasing in landscapes with more noncrop habitat but overall showing no consistent trend. Thus, models that used landscape-composition variables to predict pest-control dynamics demonstrated little potential to explain variation across studies, though prediction did improve when comparing studies with similar crop and landscape features. Overall, our work shows that surrounding noncrop habitat does not consistently improve pest management, meaning habitat conservation may bolster production in some systems and depress yields in others. Future efforts to develop tools that inform farmers when habitat conservation truly represents a win–win would benefit from increased understanding of how landscape effects are modulated by local farm management and the biology of pests and their enemies

    Spatial Transcriptomics Reveals Signatures of Histopathological Changes in Muscular Sarcoidosis

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    Sarcoidosis is a multisystemic disease characterized by non-caseating granuloma infiltrating various organs. The form with symptomatic muscular involvement is called muscular sarcoidosis. The impact of immune cells composing the granuloma on the skeletal muscle is misunderstood. Here, we investigated the granuloma–skeletal muscle interactions through spatial transcriptomics on two patients affected by muscular sarcoidosis. Five major transcriptomic clusters corresponding to perigranuloma, granuloma, and three successive muscle tissue areas (proximal, intermediate, and distal) around the granuloma were identified. Analyses revealed upregulated pathways in the granuloma corresponding to the activation of T-lymphocytes and monocytes/macrophages cytokines, the upregulation of extracellular matrix signatures, and the induction of the TGF-β signaling in the perigranuloma. A comparison between the proximal and distal muscles to the granuloma revealed an inverse correlation between the distance to the granuloma and the upregulation of cellular response to interferon-γ/α, TNF-α, IL-1,4,6, fibroblast proliferation, epithelial to mesenchymal cell transition, and the downregulation of muscle gene expression. These data shed light on the intercommunications between granulomas and the muscle tissue and provide pathophysiological mechanisms by showing that granuloma immune cells have a direct impact on proximal muscle tissue by promoting its progressive replacement by fibrosis via the expression of pro-inflammatory and profibrosing signatures. These data could possibly explain the evolution towards a state of disability for some patients

    Image_1_How farmers perceive perennial weeds in Northern France and Eastern Germany.tif

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    European farmers are required to follow the transition towards sustainable agriculture and food systems. Perennial weed management without chemical herbicides and inversion tillage is challenging farmers. Questions arise to cope with these spreading weeds. Our study focuses on farmers’ perceptions and experiences of perennial weeds and their control in Northern France and Eastern Germany. A survey was developed to explore the situation regarding present concerns and future problems for perennial weed control. The survey conducted from winter 2020/21 to spring 2021 targeted conventional, conservation and organic farms. We found a high level of awareness for perennial weeds. On average, 80.0% of Northern French farmers and 65.9% of Eastern German farmers revealed present concerns about perennial weeds. Both, Northern French and Eastern German farmers perceived perennial weeds are more damaging to crop production than other pests. In both regions, the farmers considered Cirsium arvense (L.) Scop. as the most important perennial weed. While the majority of the Eastern German farmers observed field infestations of Elymus repens (L.) Gould, Northern French farmers more often reported Sonchus arvensis L. infestations. More than 50% of the farmers stated Rumex spp. infestations in Northern France and Eastern Germany. Interestingly, Eastern German farmers are more concerned about future perennial weed problems than Northern French farmers. The reasons for farmer’s future concerns are probably connected to the farming system. In both regions, conservation and conventional farmers heavily rely on herbicides for perennial weed control, however, more farms used the active ingredient glyphosate in Eastern Germany. Nonetheless, perennial weed control is a major concern for organic farmers in both regions. We conclude that optimizing and integrating non-chemical alternatives is promising in all farming systems. Research activities are required to provide farmers and extension services with novel and profitable perennial weed management practices.</p

    Aldehyde Dehydrogenase, a Therapeutic Target in Chordoma: Analysis in 3D Cellular Models

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    Chordomas are rare, slow-growing tumors of the axial skeleton. These tumors are locally aggressive and refractory to conventional therapies. Radical surgery and radiation remain the first-line treatments. Despite these aggressive treatments, chordomas often recur and second-line treatment options are limited. The mechanisms underlying chordoma radioresistance remain unknown, although several radioresistant cancer cells have been shown to respond favorably to aldehyde dehydrogenase (ALDH) inhibition. The study of chordoma has been delayed by small patient cohorts and few available models due to the scarcity of these tumors. We thus created cellular 3D models of chordoma by using low-adherence culture systems. Then, we evaluated their radiosensitivity using colony-forming and spheroid size assays. Finally, we determined whether pharmacologically inhibiting ALDH increased their radiosensitivity. We found that 3D cellular models of chordoma (derived from primary, relapse, and metastatic tumors) reproduce the histological and gene expression features of the disease. The metastatic, relapse, and primary spheroids displayed high, medium, and low radioresistance, respectively. Moreover, inhibiting ALDH decreased the radioresistance in all three models

    Hepatitis C virus drives increased type I interferon-associated impairments associated with fibrosis severity in antiretroviral treatment-treated HIV-1-hepatitis C virus-coinfected individuals

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    International audienceOn behalf of the HepACT-VIH study group - Viral coinfections might contribute to the increased immune activation and inflammation that persist in antiretroviral treatment (ART)-treated HIV-1 patients. We investigated whether the hepatitis C virus (HCV) coinfection contributes to such alterations by impairing the plasmacytoid dendritic cell (pDC) IFNa/TLR7 pathway in a highly homogeneous group of ART-treated HIV-1-HCV-coinfected patients

    Grazoprevir/elbasvir for the immediate treatment of recently acquired HCV genotype 1 or 4 infection in MSM

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    International audienceBackground: In Europe, increases in HCV infection have been observed over the last two decades in MSM, making them a key population for recently acquired HCV. Alternative combinations of direct-acting antiviral agents against early HCV infection need to be assessed.Patients and methods: In this pilot trial, MSM with recently acquired genotype 1 or 4 HCV infection were prospectively included and received 8 weeks of oral grazoprevir 100 mg and elbasvir 50 mg in a fixed-dose combination administered once daily. The primary endpoint was sustained virological response evaluated 12 weeks after the end of treatment (EOT) (SVR12). Secondary endpoints were the virological characterization of failures, the quality of life before, during and after treatment and the rate of reinfection.Results: In a 15 month period, 30 patients were enrolled, all of whom were MSM. Of the 29 patients completing follow-up, 28 (96%, 95% CI = 82%–99%) achieved SVR12. One patient interrupted follow-up (suicide) but had undetectable plasma HCV RNA at EOT. One patient with suboptimal adherence confirmed by plasma drug monitoring relapsed and developed NS3, NS5A and NS5B resistance-associated substitutions (V36M, M28V and S556G). The most common adverse events related to study drug were diarrhoea (n = 4, 13%), insomnia (n = 2, 7%) and fatigue (n = 2, 7%), although no patient discontinued treatment. No HIV RNA breakthrough was reported in the 28 patients with HIV coinfection. At Week 48, reinfection was diagnosed in three patients.Conclusions: Our data support the use of grazoprevir/elbasvir for immediate treatment against HCV in order to reduce HCV transmission in MSM
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