80 research outputs found
Centrality evolution of the charged-particle pseudorapidity density over a broad pseudorapidity range in Pb-Pb collisions at root s(NN)=2.76TeV
Peer reviewe
Modeling control and transduction of electrochemical gradients in acid-stressed bacteria
Summary: Transmembrane electrochemical gradients drive solute uptake and constitute a substantial fraction of the cellular energy pool in bacteria. These gradients act not only as “homeostatic contributors,” but also play a dynamic and keystone role in several bacterial functions, including sensing, stress response, and metabolism. At the system level, multiple gradients interact with ion transporters and bacterial behavior in a complex, rapid, and emergent manner; consequently, experiments alone cannot untangle their interdependencies. Electrochemical gradient modeling provides a general framework to understand these interactions and their underlying mechanisms. We quantify the generation, maintenance, and interactions of electrical, proton, and potassium potential gradients under lactic acid-stress and lactic acid fermentation. Further, we elucidate a gradient-mediated mechanism for intracellular pH sensing and stress response. We demonstrate that this gradient model can yield insights on the energetic limitations of membrane transport, and can predict bacterial behavior across changing environments
Tuning Function of the Light-Driven Proteorhodopsin Proton Pump by Formation of Oligomeric and Surfactant-Based Synthetic Complexes
Correlated Diffusivities, Solubilities, and Hydrophobic Interactions in Ternary Polydimethylsiloxane–Water–Tetrahydrofuran Mixtures
Bulk
thermodynamic and kinetic properties of mixtures are generally
composition dependent, often in complicated ways, especially for partially
miscible and multicomponent systems. Combined <sup>1</sup>H chemical
shift, <sup>1</sup>H diffusion NMR, and surface forces analyses establish
the compositional dependences of water solubility and self-diffusion
in ternary polymeric polydimethylsiloxane–water–tetrahydrofuran
(THF) mixtures. The addition of THF significantly increases the solubility
of water, while decreasing its diffusivity, in hydrophobic polydimethylsiloxane.
Minimum values for the self-diffusivities of both water and THF coincide
with a minimum in the hydrophobic adhesion energy between silicone
polymer thin films near the same binary composition of 0.20 mole fraction
THF. Such interrelated diffusivities, solubilities, and hydrophobic
interactions are analyzed with respect to hydrogen bonding among the
constituent species to account for the bulk physical properties of
technologically important mixtures of silicone polymers with water
and/or cosolvents
Genetic Tuning of Iron Oxide Nanoparticle Size, Shape, and Surface Properties in Magnetospirillum magneticum
Understanding and Promoting Molecular Interactions and Charge Transfer in Dye-Mediated Hybrid Photovoltaic Materials
The performances of hybrid organic–inorganic
photovoltaics
composed of conjugated polymers and metal oxides are generally limited
by poor electronic coupling at hybrid interfaces. In this study, physicochemical
interactions and bonding at the organic–inorganic interfaces
are promoted by incorporating organoruthenium dye molecules into self-assembled
mesostructured conjugated polymer–titania composites. These
materials are synthesized from solution in the presence of surfactant
structure-directing agents (SDA) that solubilize and direct the nanoscale
compositions and structures of the conjugated polymer, dye, and inorganic
precursor species. Judicious selection of the SDA and dye species,
in particular, exploits interactions that direct the dye species to
the inorganic–organic interfaces, leading to significantly
enhanced electronic coupling, as well as increased photoabsorption
efficiency. This is demonstrated for the hydrophilic organoruthenium
dye N3, used in conjunction with alkyleneoxide triblock copolymer
SDA, polythiophene conjugated polymer, and titania species, in which
the N3 dye species are localized in molecular proximity to and interact
strongly with the titania framework, as established by solid-state
NMR spectroscopy. In contrast, a closely related but more hydrophobic
organoruthenium dye, Z907, is shown to interact more weakly with the
titania framework, yielding significantly lower photocurrent generation.
The strong SDA-directed N3-TiO<sub><i>x</i></sub> interactions
result in a significant reduction of the lifetime of the photoexcited
state and enhanced macroscopic photocurrent generation in photovoltaic
devices. This study demonstrates that multicomponent self-assembly
can be harnessed for the fabrication of hierarchical materials and
devices with nanoscale control of chemical compositions and surface
interactions to improve photovoltaic properties
Functionally Active Membrane Proteins Incorporated in Mesostructured Silica Films
A versatile
synthetic protocol is reported that allows high concentrations
of functionally active membrane proteins to be incorporated in mesostructured
silica materials. Judicious selections of solvent, surfactant, silica
precursor species, and synthesis conditions enable membrane proteins
to be stabilized in solution and during subsequent coassembly into
silica–surfactant composites with nano- and mesoscale order.
This was demonstrated by using a combination of nonionic (<i>n</i>-dodecyl-β-d-maltoside or Pluronic P123),
lipid-like (1,2-diheptanoyl-<i>s</i><i>n</i>-glycero-3-phosphocholine),
and perfluoro-octanoate surfactants under mild acidic conditions to
coassemble the light-responsive transmembrane protein proteorhodopsin
at concentrations up to 15 wt % into the hydrophobic regions of worm-like
mesostructured silica materials in films. Small-angle X-ray scattering,
electron paramagnetic resonance spectroscopy, and transient UV–visible
spectroscopy analyses established that proteorhodopsin molecules in
mesostructured silica films exhibited native-like function, as well
as enhanced thermal stability compared to surfactant or lipid environments.
The light absorbance properties and light-activated conformational
changes of proteorhodopsin guests in mesostructured silica films are
consistent with those associated with the native H<sup>+</sup>-pumping
mechanism of these biomolecules. The synthetic protocol is expected
to be general, as demonstrated also for the incorporation of functionally
active cytochrome <i>c</i>, a peripheral membrane protein
enzyme involved in electron transport, into mesostructured silica–cationic
surfactant films
Waxy Gels with Asphaltenes 2: Use of Wax Control Polymers
The effect of asphaltenes on the effectiveness of wax control polymers was studied using a model waxy oil and a set of polymers with controlled crystalline and polar/aromatic content. The effect of crystalline content was examined with a set of maleic anhydride copolymers with alkyl appendages of different lengths. Different polar and/or aromatic functionalities were incorporated into the maleic anhydride copolymers (MAC) and poly(ethylene butene) polymers to probe potential interactions with the asphaltenes. The performance of the polymers was measured by testing their effect upon precipitation temperature, gelation temperature, and yield stress. Some polymers provided little or no benefit. Others had significant effects, reducing precipitation temperatures up to 1.9 °C, gelation temperatures up to 37 °C, and yield stresses up to 2200-fold for solutions of 8 wt % wax. Polymer efficacy was almost entirely determined by the crystalline functionality incorporated into the polymer rather than the presence of polar functionality designed to target interactions with the asphaltenes. The performance of the polymers is attributed to the ability of the polymers to coprecipitate with the wax. Comparison with previously published results using the same wax showed that the selectivity of the MACs was strongly affected by wax concentration, not because the quantity of wax overwhelmed the polymer, but because the range of wax precipitation temperatures increased above that of the polymer. Comparison of the effect of polymers in solutions with and without asphaltenes showed that asphaltenes had different effects on polymer performance, depending on the property being measured (precipitation temperature, gelation temperature, or yield stress)
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