Designed Coiled-Coil Peptides Inhibit the Type Three Secretion System of Enteropathogenic Escherichia coli

BACKGROUND: Enteropathogenic E. coli (EPEC) and enterohemorrhagic E. coli (EHEC) are two categories of E. coli strains associated with human disease. A major virulence factor of both pathotypes is the expression of a type three secretion system (TTSS), responsible for their ability to adhere to gut mucosa causing a characteristic attaching and effacing lesion (A/E). The TTSS translocates effector proteins directly into the host cell that subvert mammalian cell biochemistry. METHODS/PRINCIPAL FINDINGS: We examined synthetic peptides designed to inhibit the TTSS. CoilA and CoilB peptides, both representing coiled-coil regions of the translocator protein EspA, and CoilD peptide, corresponding to a coiled-coil region of the needle protein EscF, were effective in inhibiting the TTSS dependent hemolysis of red blood cells by the EPEC E2348/69 strain. CoilA and CoilB peptides also reduced the formation of actin pedestals by the same strain in HEp-2 cells and impaired the TTSS-mediated protein translocation into the epithelial cell. Interestingly, CoilA and CoilB were able to block EspA assembly, destabilizing the TTSS and thereby Tir translocation. This blockage of EspA polymerization by CoilA or CoilB peptides, also inhibited the correct delivery of EspB and EspD as detected by immunoblotting. Interestingly, electron microscopy of bacteria incubated with the CoilA peptide showed a reduction of the length of EspA filaments. CONCLUSIONS: Our data indicate that coiled-coil peptides can prevent the assembly and thus the functionality of the TTSS apparatus and suggest that these peptides could provide an attractive tool to block EPEC and EHEC pathogenesis

An integrated hypothesis on the domestication of Bactris gasipaes

Data Availability Statement: All relevant data are within the paper and its Supporting Information files.Peach palm (Bactris gasipaes Kunth) has had a central place in the livelihoods of people in the Americas since pre-Columbian times, notably for its edible fruits and multi-purpose wood. The botanical taxon includes both domesticated and wild varieties. Domesticated var gasipaes is believed to derive from one or more of the three wild types of var. chichagui identified today, although the exact dynamics and location of the domestication are still uncertain. Drawing on a combination of molecular and phenotypic diversity data, modeling of past climate suitability and existing literature, we present an integrated hypothesis about peach palm’s domestication. We support a single initial domestication event in south western Amazonia, giving rise to var. chichagui type 3, the putative incipient domesticate. We argue that subsequent dispersal by humans across western Amazonia, and possibly into Central America allowed for secondary domestication events through hybridization with resident wild populations, and differential human selection pressures, resulting in the diversity of present-day landraces. The high phenotypic diversity in the Ecuadorian and northern Peruvian Amazon suggest that human selection of different traits was particularly intense there. While acknowledging the need for further data collection, we believe that our results contribute new insights and tools to understand domestication and dispersal patterns of this important native staple, as well as to plan for its conservatio

Associations of Allostatic Load with Level of and Change in Cognitive Function Among Middle-Aged and Older Hispanic/Latino Adults: The Study of Latinos-Investigation of Neurocognitive Aging (SOL-INCA).

BACKGROUND: Higher allostatic load (AL), a multi-system measure of physiological dysregulation considered a proxy for chronic stress exposure, is associated with poorer global cognition (GC) in older non-Hispanic white adults. However, evidence of these associations in middle-aged and older US-based Hispanic/Latino adults is limited. OBJECTIVE: To examine associations of AL with level of cognition, performance in cognition 7 years later, and change in cognition over 7 years among middle-aged and older US-based Hispanic/Latino adults. METHODS: We used data (n = 5,799, 45-74 years at baseline) from the Hispanic Community Health Study/Study of Latinos (HCHS/SOL) and SOL-Investigation of Neurocognitive Aging (SOL-INCA). The AL score comprised 16 biomarkers representing cardiometabolic, glucose, cardiopulmonary, parasympathetic, and inflammatory systems (higher scores = greater dysregulation). Cognitive outcomes included GC and individual tests of verbal learning and memory, world fluency (WF), Digit Symbol Substitution (DSS), and Trail Making (Parts A & B). Survey-linear regressions assessed associations of AL with performance in cognition at baseline, 7 years later, and via 7-year cognitive change scores adjusting for sociodemographic characteristics, lifestyle factors, and depressive symptoms. RESULTS: Higher AL was associated with lower baseline performance in GC and WF; and lower 7-year follow-up performance in these same measures plus DSS and Trail Making Parts A & B. Higher AL was associated with more pronounced 7-year change (reduction) in GC and on WF and DSS tests. CONCLUSIONS: Findings extend previous evidence in predominantly older non-Hispanic white cohorts to show that AL is related to level of and change in GC (as well as WF and DSS) among middle-aged and older US-based Hispanic/Latino adults

Whole-Blood Mitochondrial DNA Copies Are Associated With the Prognosis of Acute Respiratory Distress Syndrome After Sepsis.

https://pubmed.ncbi.nlm.nih.gov/34557198/#:~:text=Resumen-,El%20s%C3%ADndrome%20de%20dificultad%20respiratoria%20aguda%20(SDRA)%20es%20un%20proceso,v%C3%ADnculos%20mec%C3%A1nicos%20de%20esta%20observaci%C3%B3n%20con%20la%20patogenia%20del%20SDRA.,-Palabras%20clave%3A%20SDR

Latin Americans show wide-spread Converso ancestry and imprint of local Native ancestry on physical appearance

Historical records and genetic analyses indicate that Latin Americans trace their ancestry mainly to the intermixing (admixture) of Native Americans, Europeans and Sub-Saharan Africans. Using novel haplotype-based methods, here we infer sub-continental ancestry in over 6,500 Latin Americans and evaluate the impact of regional ancestry variation on physical appearance. We find that Native American ancestry components in Latin Americans correspond geographically to the present-day genetic structure of Native groups, and that sources of non-Native ancestry, and admixture timings, match documented migratory flows. We also detect South/East Mediterranean ancestry across Latin America, probably stemming mostly from the clandestine colonial migration of Christian converts of non-European origin (Conversos). Furthermore, we find that ancestry related to highland (Central Andean) versus lowland (Mapuche) Natives is associated with variation in facial features, particularly nose morphology, and detect significant differences in allele frequencies between these groups at loci previously associated with nose morphology in this sample.Instituto Multidisciplinario de Biología Celula

Latin Americans show wide-spread Converso ancestry and imprint of local Native ancestry on physical appearance

Historical records and genetic analyses indicate that Latin Americans trace their ancestry mainly to the intermixing (admixture) of Native Americans, Europeans and Sub-Saharan Africans. Using novel haplotype-based methods, here we infer sub-continental ancestry in over 6,500 Latin Americans and evaluate the impact of regional ancestry variation on physical appearance. We find that Native American ancestry components in Latin Americans correspond geographically to the present-day genetic structure of Native groups, and that sources of non-Native ancestry, and admixture timings, match documented migratory flows. We also detect South/East Mediterranean ancestry across Latin America, probably stemming mostly from the clandestine colonial migration of Christian converts of non-European origin (Conversos). Furthermore, we find that ancestry related to highland (Central Andean) versus lowland (Mapuche) Natives is associated with variation in facial features, particularly nose morphology, and detect significant differences in allele frequencies between these groups at loci previously associated with nose morphology in this sample.Instituto Multidisciplinario de Biología Celula

Clonal chromosomal mosaicism and loss of chromosome Y in elderly men increase vulnerability for SARS-CoV-2

The pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2, COVID-19) had an estimated overall case fatality ratio of 1.38% (pre-vaccination), being 53% higher in males and increasing exponentially with age. Among 9578 individuals diagnosed with COVID-19 in the SCOURGE study, we found 133 cases (1.42%) with detectable clonal mosaicism for chromosome alterations (mCA) and 226 males (5.08%) with acquired loss of chromosome Y (LOY). Individuals with clonal mosaic events (mCA and/or LOY) showed a 54% increase in the risk of COVID-19 lethality. LOY is associated with transcriptomic biomarkers of immune dysfunction, pro-coagulation activity and cardiovascular risk. Interferon-induced genes involved in the initial immune response to SARS-CoV-2 are also down-regulated in LOY. Thus, mCA and LOY underlie at least part of the sex-biased severity and mortality of COVID-19 in aging patients. Given its potential therapeutic and prognostic relevance, evaluation of clonal mosaicism should be implemented as biomarker of COVID-19 severity in elderly people. Among 9578 individuals diagnosed with COVID-19 in the SCOURGE study, individuals with clonal mosaic events (clonal mosaicism for chromosome alterations and/or loss of chromosome Y) showed an increased risk of COVID-19 lethality

Report from Working Group 3: Beyond the standard model physics at the HL-LHC and HE-LHC

This is the third out of five chapters of the final report [1] of the Workshop on Physics at HL-LHC, and perspectives on HE-LHC [2]. It is devoted to the study of the potential, in the search for Beyond the Standard Model (BSM) physics, of the High Luminosity (HL) phase of the LHC, defined as $3$ ab$^{-1}$ of data taken at a centre-of-mass energy of 14 TeV, and of a possible future upgrade, the High Energy (HE) LHC, defined as $15$ ab$^{-1}$ of data at a centre-of-mass energy of 27 TeV. We consider a large variety of new physics models, both in a simplified model fashion and in a more model-dependent one. A long list of contributions from the theory and experimental (ATLAS, CMS, LHCb) communities have been collected and merged together to give a complete, wide, and consistent view of future prospects for BSM physics at the considered colliders. On top of the usual standard candles, such as supersymmetric simplified models and resonances, considered for the evaluation of future collider potentials, this report contains results on dark matter and dark sectors, long lived particles, leptoquarks, sterile neutrinos, axion-like particles, heavy scalars, vector-like quarks, and more. Particular attention is placed, especially in the study of the HL-LHC prospects, to the detector upgrades, the assessment of the future systematic uncertainties, and new experimental techniques. The general conclusion is that the HL-LHC, on top of allowing to extend the present LHC mass and coupling reach by $20-50\%$ on most new physics scenarios, will also be able to constrain, and potentially discover, new physics that is presently unconstrained. Moreover, compared to the HL-LHC, the reach in most observables will, generally more than double at the HE-LHC, which may represent a good candidate future facility for a final test of TeV-scale new physics

Campo Experimental Potrok Aike : resultado de 15 años de labor técnica

Libro de edición impresa publicado en 2005 y con edición electrónica en el año 2016.Al crearse, en el año 1985, la Estación Experimental Santa Cruz en el marco del convenio entre el INTA y la provincia de Santa Cruz surgió la necesidad de contar con un campo donde se pudieran desarrollar trabajos de investigación en ganadería, fundamentalmente ovina, y en pastizales naturales con el necesario control de diferentes variables productivas y ambientales. El gobierno provincial cedió un predio ubicado al sur de la provincia de Santa Cruz, en una zona representativa de la Estepa magallánica seca, en el extremo austral de la Patagonia. Esta publicación recopiló y organizó los datos e información dispersa resultante de más de 15 años de trabajo, y transformó esa materia prima en información accesible para técnicos y productores. Conformada por el aporte de distintos autores ofrece la información de base para describir el ambiente del Campo Experimental Potrok Aike, más las conclusiones de ensayos y experiencias llevadas a cabo en el lugar, que son perfectamente extrapolables a todo el sur provincial.EEA Santa CruzFil: Alegre, María Beatriz. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Alegre, María Beatriz. Consejo Agrario Provincial- Provincia de Santa Cruz; Argentina.Fil: Alegre, María Beatriz. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; ArgentinaFil: Anglesio, Francisco. Secretaría de Medio Ambiente. Provincia de Santa Cruz. Santa Cruz; Argentina.Fil: Baetti, Carlos. Consejo Agrario Provincial- Provincia de Santa Cruz; Argentina.Fil: Baetti, Carlos. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Bahamonde, Héctor Alejandro. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Bahamonde, Héctor Alejandro. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; ArgentinaFil: Barría, Julio. Consejo Agrario Provincial- Provincia de Santa Cruz; Argentina.Fil: Battini, Alberto. Consejo Agrario Provincial- Provincia de Santa Cruz; Argentina.Fil: Baumann, Osvaldo. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Borrelli, Pablo. Consultor privado. Buenos Aires; Argentina.Fil: Camejo, Ana María. Consultor privado. Trelew; Argentina.Fil: Castillo, Miguel. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Cibils, Andrés. New México State University. Department of Animal and Range Sciences; Estados UnidosFil: Ciurca, Lorena. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Clifton, Guillermo Raimundo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; Argentina.Fil: Clifton, Guillermo Raimundo. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Culun, Victor Pascual. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; ArgentinaFil: Escalada, Julián. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Ferrante, Daniela. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; ArgentinaFil: Ferrante, Daniela. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Gismondi, Daniel. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: González, Liliana. Consejo Agrario Provincial- Provincia de Santa Cruz; Argentina.Fil: Grima, Daniel. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Humano, Gervasio. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; ArgentinaFil: Iacomini, Mónica. Secretaría de la Producción. Provincia de Santa Cruz. Santa Cruz; Argentina.Fil: Iglesias, Roberto. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Chubut; Argentina.Fil: Kofalt, Bustamante Rosa. Consejo Agrario Provincial- Provincia de Santa Cruz; Argentina.Fil: Kofalt, Bustamante Rosa. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Kofalt, Bustamante Rosa. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; Argentina.Fil: Lamoureux, Mabel Noemi. Consejo Agrario Provincial- Provincia de Santa Cruz; Argentina.Fil: Lamoureux, Mabel Noemi. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; ArgentinaFil: Larrosa, José. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; ArgentinaFil: Manero, Amanda. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Manero, Amanda. Consejo Agrario Provincial- Provincia de Santa Cruz; Argentina.Fil: Marcolín, Arrigo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Bariloche; Argentina.Fil: Mascó, Mercedes. Consejo Agrario Provincial- Provincia de Santa Cruz; Argentina.Fil: Mascó, Mercedes. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; Argentina.Fil: Mascó, Mercedes. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Migliora, Horacio. Consejo Agrario Provincial- Provincia de Santa Cruz; Argentina.Fil: Milicevic, Francisco. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; ArgentinaFil: Montes, Leopoldo. Instituto Nacional de Tecnología Agropecuaria (INTA). Centro Regional Patagonia Sur; Argentina.Fil: Oliva, Gabriel Esteban. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Oliva, Gabriel Esteban. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; Argentina.Fil: Osses, Julio Angel. Consejo Agrario Provincial- Provincia de Santa Cruz; Argentina.Fil: Paredes, Paula. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; Argentina.Fil: Peinetti, Raúl. Universidad Nacional de La Pampa. Facultad de Agronomía; Argentina.Fil: Rial, Pablo Eduardo. Ministerio de Economía y Obras Públicas. Provincia de Santa Cruz; Argentina.Fil: Rial, Pablo Eduardo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Santa Cruz; Argentina.Fil: Romero, Rubén. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Rosales, Valeria. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Salazar, Daniel. LU85 TV Canal 9. Auxiliar en Control de Erosión de Suelos. Provincia de Santa Cruz; Argentina.Fil: Tapia, Hector Horacio. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Chubut; Argentina.Fil: Torra, Francisco. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina.Fil: Zerpa, Débora. Universidad Nacional de la Patagonia Austral. Unidad Académica Río Gallegos; Argentina

Sloan Digital Sky Survey IV: mapping the Milky Way, nearby galaxies, and the distant universe

We describe the Sloan Digital Sky Survey IV (SDSS-IV), a project encompassing three major spectroscopic programs. The Apache Point Observatory Galactic Evolution Experiment 2 (APOGEE-2) is observing hundreds of thousands of Milky Way stars at high resolution and high signal-to-noise ratios in the near-infrared. The Mapping Nearby Galaxies at Apache Point Observatory (MaNGA) survey is obtaining spatially resolved spectroscopy for thousands of nearby galaxies (median ). The extended Baryon Oscillation Spectroscopic Survey (eBOSS) is mapping the galaxy, quasar, and neutral gas distributions between and 3.5 to constrain cosmology using baryon acoustic oscillations, redshift space distortions, and the shape of the power spectrum. Within eBOSS, we are conducting two major subprograms: the SPectroscopic IDentification of eROSITA Sources (SPIDERS), investigating X-ray AGNs and galaxies in X-ray clusters, and the Time Domain Spectroscopic Survey (TDSS), obtaining spectra of variable sources. All programs use the 2.5 m Sloan Foundation Telescope at the Apache Point Observatory; observations there began in Summer 2014. APOGEE-2 also operates a second near-infrared spectrograph at the 2.5 m du Pont Telescope at Las Campanas Observatory, with observations beginning in early 2017. Observations at both facilities are scheduled to continue through 2020. In keeping with previous SDSS policy, SDSS-IV provides regularly scheduled public data releases; the first one, Data Release 13, was made available in 2016 July