27 research outputs found
New Knowledge on Distribution and Abundance of Toxic Microalgal Species and Related Toxins in the Northwestern Black Sea
Numerous potentially toxic plankton species commonly occur in the Black Sea, and phycotoxins have been reported. However, the taxonomy, phycotoxin profiles, and distribution of harmful microalgae in the basin are still understudied. An integrated microscopic (light microscopy) and molecular (18S rRNA gene metabarcoding and qPCR) approach complemented with toxin analysis was applied at 41 stations in the northwestern part of the Black Sea for better taxonomic coverage and toxin profiling in natural populations. The combined dataset included 20 potentially toxic species, some of which (Dinophysis acuminata, Dinophysis acuta, Gonyaulax spinifera, and Karlodinium veneficum) were detected in over 95% of the stations. In parallel, pectenotoxins (PTX-2 as a major toxin) were registered in all samples, and yessotoxins were present at most of the sampling points. PTX-1 and PTX-13, as well as some YTX variants, were recorded for the first time in the basin. A positive correlation was found between the cell abundance of Dinophysis acuta and pectenotoxins, and between Lingulodinium polyedra and Protoceratium reticulatum and yessotoxins. Toxic microalgae and toxin variant abundance and spatial distribution was associated with environmental parameters. Despite the low levels of the identified phycotoxins and their low oral toxicity, chronic toxic exposure could represent an ecosystem and human health hazard
Spatial distribution models and biodiversity of phytoplankton cysts in the Black Sea
The current study employed diverse statistical and machine learning techniques to investigate the biodiversity and spatial distribution of phytoplankton cysts in the Black Sea. The MaxEnt distribution modeling technique was used to forecast the habitat suitability for the cysts of three potentially toxic microalgal taxa (Lingulodinium polyedra, Polykrikos hartmannii, and Alexandrium spp.). The key variables controlling the habitat suitability of Alexandrium spp. and L. polyedra were nitrates and temperature, while for the P. hartmannii cysts, nitrates and salinity. The region with the highest likelihood of L. polyedra cyst occurrence appears to be in the western coastal and shelf waters, which coincides with the areas where L. polyedra red tides have been documented. The projected habitat suitability of the examined species partially overlapped, perhaps as a result of their cohabitation within the phytoplankton community and shared preferences for specific environmental conditions, demonstrating similar survival strategies. The north-western region of the Black Sea was found to be the most suitable environment for the studied potentially toxic species, presumably posing a greater risk for the onset of blooming events. Two distinct aspects of cysts’ ecology and settlement were observed: the dispersal of cysts concerns their movement within the water column from one place to another prior to settling, while habitat suitability pertains to the particular environment required for their survival, growth, and germination. Therefore, it is crucial to validate the model in order to accurately determine a suitable habitat as well as understand the transportation patterns linked to the particular hydrodynamic properties of the water column and the distinct features of the local environment
Uspostavljanje popisa morskih invazivnih vrsta u ESENIAS području: sadašnja situacija i buduća očekivanja
In this study we present a list of invasive/potential invasive alien species in the East and South European Network for Invasive Alien Species (ESENIAS) countries with marine borders. The species
were classified according to the existing literature and experts’ judgment, as established, casual, invasive and expected. Finally, factsheets were compiled for ten species of high importance based on their expanding/invading character. Of the 160 species comprising the list, 149 were already present in the ESENIAS countries, while eleven were invasive species either present in the Mediterranean or in other European Seas, likely to be recorded in the ESENIAS countries. The majority of the species were of Red Sea/IndoPacific origin (97 species; 60.6%). Italy, Turkey and Greece were the countries with the highest representation of species (159, 152 and 139 species respectively), due to their extended coastline and the number of scholars working on marine invasive species. The highest number of established species was recorded in Turkey (116 species), whereas in Italy and Greece the most numerous species were the “expected” ones (85 and 48 species, respectively). The eastern Adriatic Sea countries (i.e. Albania, Croatia, Montenegro and Slovenia) had generally low numbers of species in this list, many of which are still “expected” to arrive from the neighbouring countries of Greece and Italy. Finally, the most frequently potential pathway was transfer stowaways (ship ballast water: 41 cases; ship hull fouling: 55), whereas unaided spread of Lessepsian immigrants followed (95 cases). This list is intended to serve as an early warning system that through horizon scanning process would assist ESENIAS countries to prioritise invasive alien species, their pathways and the areas of higher likelihood to appear, in order to take management measures.U ovom radu predstavljamo popis invazivnih i potencijalno invazivnih vrsta na istoku i jugu Europske mreže za invazivne vrste (ESENIAS) u zemljama s morskim granicama. Vrste su klasificirane prema postojećoj literaturi i procjeni stručnjaka, pa su tako utvrđene grupe
povremenih, invazivnih i očekivanih vrsta. Podaci su dati za deset vrsta čija se važnost temelji na njihovom širenju i invazivnom karakteru. Od 160 vrsta koje sadrži popis, 148 je već bilo prisutno u ESENIAS zemljama, dok je 9 invazivnih vrsta bilo prisutno u Sredozemnom ili u drugim europskim morima, a vjerojatno je da će se zabilježiti i u zemljama udruženim u ESENIAS. Većina vrsta je bile iz Crvenog mora / indopacifičkog podrijetla (97 vrsta, 60,6%). Italija, Turska i Grčka su zemlje s najvišom zastupljenošću vrsta (159, 152 i 139), zbog njihove proširene obale i broja znanstvenika koji rade na morskim invazivnim vrstama. Najveći broj utvrđenih vrsta zabilježen je u Turskoj (116 vrsta), dok su u Italiji i Grčkoj najbrojnije vrste bile “očekivane” (85 i 48 vrsta, respektivno). Istočne zemlje Jadranskog mora (npr. Albanija, Hrvatska, Crna Gora i Slovenija) imale su
općenito nizak broj vrsta na ovom popisu, od kojih mnoge još “očekujemo” da pristignu iz susjednih zemalja: Grčke i Italije.
Konačno, najčešće su potencijalni putovi bili „transferni putnici“ (balastna voda broda: 41 slučaj, obraštaj brodskog trupa: 55), dok je slijedilo i širenje lesepsijskih migranata (95 slučajeva).
Ovaj popis je namijenjen da služi kao sustav ranog upozorenja koji bi kroz proces skeniranja pomogao državama ESENIAS da daju prioritet invazivnim stranim vrstama, njihovim putovima i područjima veće vjerojatnosti pojavljivanja, kako bi se poduzele potrebne mjere upravljanja
The ocean sampling day consortium
Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites. This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits
The Ocean Sampling Day Consortium
Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites. This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits
Diatom colonization and community development in Antarctic marine waters – a short-term experiment
Diversity and habitat preferences of benthic diatoms from South Bay (Livingston Island, Antarctica)
Background and aims – Despite a long research history, knowledge of Antarctic marine benthic diatoms is fragmentary. This study reports on marine benthic diatoms from South Bay, Livingston Island, focusing on diatoms living on hard substrata, and species distribution across different coastal habitats.Material and methods – Samples were collected from tidal pools (19), intertidal cobbles (9), artificial substrata installed at various depths (10), coastal rocks (2), and bottom sediments at depths > 20 m (2). Species identifications and community analyses were done using LM with additional information obtained using SEM. nMDS based on diatom abundance data was applied to display differences between the samples by habitat/substratum type and sampling month. The significance of the habitat/substratum type and sampling month on diatom communities was checked with PERMANOVA. Similarity/dissimilarity within and between sample groups and their contributing species were explored with SIMPER.Key results – In total, 133 diatom taxa were recorded, of which 110 are benthic. A large number of taxa could not be certainly identified. Taxonomic remarks and ecology and distribution data for some rarely reported species with convoluted taxonomic and nomenclatural histories are given. One new combination is proposed. Diatom communities were influenced by the habitat/substratum type, but not by seasonality. Significant differences existed between communities in tidal pools and those on cobbles, artificial substrata, and sediments, and between those on sediments and artificial substrata. Navicula aff. perminuta dominated on cobbles and often on artificial substrata. Species forming mucilage tubes, tree-like colonies, and chains of cells embedded in mucilage were restricted to tidal pools.Conclusion – Benthic diatom communities from South Bay are highly diverse and species show distinct distributions in the coastal habitats, but the scarce studies and often confusing nomenclature history of the taxa make their identification challenging, and potentially common species for the region remain unknown
An attempt to semi-quantify potentially toxic diatoms of the genus <i>Pseudo-nitzschia</i> in Tokyo Bay, Japan by using massively parallel sequencing technology
Morphological and genetic characteristics of garfish Belone belone (L., 1760) (Belonidae, Teleostei) population from the southern Bulgarian Black Sea coast
This study was conducted to investigate genetic and some morphometric and meristic characteristics of garfish Belone belone from Nesebar in the Bulgarian Black Sea coast. Twelve morphometric characters were measured, and six meristic characters were counted for each individual. Based on both sexes’ morphological and meristic analyses, no statistically significant sexual differences were observed. Additionally, DNA barcoding was done. The fragment of the cytochrome oxidase subunit I (COI) gene of mitochondrial DNA was sequenced to supplement the species identification and population diversity study. Two haplotypes were found out of 39 sequences, indicating a low level of haplotype diversity (0.146±0.072). Nucleotide diversity was also found to be low (0.00023±0.00011). The Nesebar population of B. belone requires conservation efforts, due to the highly decreased mtDNA genetic diversity
Biodiversity of phytoplankton cyst assemblages in surface sediments of the Black Sea based on metabarcoding
Resting stages are common for the life cycle of some phytoplankton species, including blooming and potentially toxic species. The “seed bank” accumulated in the sediments can initiate blooms in the water column and could be an early warning signal of harmful algal blooms (HABs). In order to identify the phytoplankton cyst assemblages, thirteen surface sediment samples were collected from different sites in the Black Sea. The diversity of the resting stages was assessed using high-throughput sequencing metabarcoding (V7-9 hypervariable region of the 18S rDNA). One hundred and eighty microalgal species were identified with high level of similarity to the reference sequences. Dinoflagellates were dominated by Biecheleria, Gymnodinium and Karlodinium. Within diatoms, Skeletonema, Chaetoceros and Thalassiosira were the most abundant genera. Sixteen of the detected operational taxonomic units (OTUs) were assigned to harmful microalgae (12 dinoflagellates species, 1 diatom, 1 haptophyte and 2 raphidophytes). No pattern of microalgal sequences depth distribution was discriminated. The results show that DNA metabarcoding has a great potential for assessment of the phytoplankton diversity in environmental sediments