The structure and function of complex networks

Inspired by empirical studies of networked systems such as the Internet, social networks, and biological networks, researchers have in recent years developed a variety of techniques and models to help us understand or predict the behavior of these systems. Here we review developments in this field, including such concepts as the small-world effect, degree distributions, clustering, network correlations, random graph models, models of network growth and preferential attachment, and dynamical processes taking place on networks.Comment: Review article, 58 pages, 16 figures, 3 tables, 429 references, published in SIAM Review (2003

Approximate entropy of network parameters

We study the notion of approximate entropy within the framework of network theory. Approximate entropy is an uncertainty measure originally proposed in the context of dynamical systems and time series. We firstly define a purely structural entropy obtained by computing the approximate entropy of the so called slide sequence. This is a surrogate of the degree sequence and it is suggested by the frequency partition of a graph. We examine this quantity for standard scale-free and Erd\H{o}s-R\'enyi networks. By using classical results of Pincus, we show that our entropy measure converges with network size to a certain binary Shannon entropy. On a second step, with specific attention to networks generated by dynamical processes, we investigate approximate entropy of horizontal visibility graphs. Visibility graphs permit to naturally associate to a network the notion of temporal correlations, therefore providing the measure a dynamical garment. We show that approximate entropy distinguishes visibility graphs generated by processes with different complexity. The result probes to a greater extent these networks for the study of dynamical systems. Applications to certain biological data arising in cancer genomics are finally considered in the light of both approaches.Comment: 11 pages, 5 EPS figure

Extreme value theory, Poisson-Dirichlet distributions and FPP on random networks

We study first passage percolation on the configuration model (CM) having power-law degrees with exponent $\tau\in [1,2)$. To this end we equip the edges with exponential weights. We derive the distributional limit of the minimal weight of a path between typical vertices in the network and the number of edges on the minimal weight path, which can be computed in terms of the Poisson-Dirichlet distribution. We explicitly describe these limits via the construction of an infinite limiting object describing the FPP problem in the densely connected core of the network. We consider two separate cases, namely, the {\it original CM}, in which each edge, regardless of its multiplicity, receives an independent exponential weight, as well as the {\it erased CM}, for which there is an independent exponential weight between any pair of direct neighbors. While the results are qualitatively similar, surprisingly the limiting random variables are quite different. Our results imply that the flow carrying properties of the network are markedly different from either the mean-field setting or the locally tree-like setting, which occurs as $\tau>2$, and for which the hopcount between typical vertices scales as $\log{n}$. In our setting the hopcount is tight and has an explicit limiting distribution, showing that one can transfer information remarkably quickly between different vertices in the network. This efficiency has a down side in that such networks are remarkably fragile to directed attacks. These results continue a general program by the authors to obtain a complete picture of how random disorder changes the inherent geometry of various random network models

Degree distribution of shortest path trees and bias of network sampling algorithms

In this article, we explicitly derive the limiting degree distribution of the shortest path tree from a single source on various random network models with edge weights. We determine the asymptotics of the degree distribution for large degrees of this tree and compare it to the degree distribution of the original graph. We perform this analysis for the complete graph with edge weights that are powers of exponential random variables (weak disorder in the stochastic mean-field model of distance), as well as on the configuration model with edge-weights drawn according to any continuous distribution. In the latter, the focus is on settings where the degrees obey a power law, and we show that the shortest path tree again obeys a power law with the same degree power-law exponent. We also consider random $r$-regular graphs for large $r$, and show that the degree distribution of the shortest path tree is closely related to the shortest path tree for the stochastic mean-field model of distance. We use our results to shed light on an empirically observed bias in network sampling methods. This is part of a general program initiated in previous works by Bhamidi, van der Hofstad and Hooghiemstra [Ann. Appl. Probab. 20 (2010) 1907-1965], [Combin. Probab. Comput. 20 (2011) 683-707], [Adv. in Appl. Probab. 42 (2010) 706-738] of analyzing the effect of attaching random edge lengths on the geometry of random network models.Comment: Published at http://dx.doi.org/10.1214/14-AAP1036 in the Annals of Applied Probability (http://www.imstat.org/aap/) by the Institute of Mathematical Statistics (http://www.imstat.org

Temporal Networks

A great variety of systems in nature, society and technology -- from the web of sexual contacts to the Internet, from the nervous system to power grids -- can be modeled as graphs of vertices coupled by edges. The network structure, describing how the graph is wired, helps us understand, predict and optimize the behavior of dynamical systems. In many cases, however, the edges are not continuously active. As an example, in networks of communication via email, text messages, or phone calls, edges represent sequences of instantaneous or practically instantaneous contacts. In some cases, edges are active for non-negligible periods of time: e.g., the proximity patterns of inpatients at hospitals can be represented by a graph where an edge between two individuals is on throughout the time they are at the same ward. Like network topology, the temporal structure of edge activations can affect dynamics of systems interacting through the network, from disease contagion on the network of patients to information diffusion over an e-mail network. In this review, we present the emergent field of temporal networks, and discuss methods for analyzing topological and temporal structure and models for elucidating their relation to the behavior of dynamical systems. In the light of traditional network theory, one can see this framework as moving the information of when things happen from the dynamical system on the network, to the network itself. Since fundamental properties, such as the transitivity of edges, do not necessarily hold in temporal networks, many of these methods need to be quite different from those for static networks