In vitro interactions of Alternaria mycotoxins, an emerging class of food contaminants, with the gut microbiota: a bidirectional relationship

The human gut microbiota plays an important role in the maintenance of human health. Factors able to modify its composition might predispose the host to the development of pathologies. Among the various xenobiotics introduced through the diet, Alternaria mycotoxins are speculated to represent a threat for human health. However, limited data are currently available about the bidirectional relation between gut microbiota and Alternaria mycotoxins. In the present work, we investigated the in vitro effects of different concentrations of a complex extract of Alternaria mycotoxins (CE; containing eleven mycotoxins; e.g. 0.153 µM alternariol and 2.3 µM altersetin, at the maximum CE concentration tested) on human gut bacterial strains, as well as the ability of the latter to metabolize or adsorb these compounds. Results from the minimum inhibitory concentration assay showed the scarce ability of CE to inhibit the growth of the tested strains. However, the growth kinetics of most of the strains were negatively affected by exposure to the various CE concentrations, mainly at the highest dose (50 µg/mL). The CE was also found to antagonize the formation of biofilms, already at concentrations of 0.5 µg/mL. LC–MS/MS data analysis of the mycotoxin concentrations found in bacterial pellets and supernatants after 24 h incubation showed the ability of bacterial strains to adsorb some Alternaria mycotoxins, especially the key toxins alternariol, alternariol monomethyl ether, and altersetin. The tendency of these mycotoxins to accumulate within bacterial pellets, especially in those of Gram-negative strains, was found to be directly related to their lipophilicity

Free energy barrier for melittin reorientation from a membrane-bound state to a transmembrane state

An important step in a phospholipid membrane pore formation by melittin antimicrobial peptide is a reorientation of the peptide from a surface into a transmembrane conformation. In this work we perform umbrella sampling simulations to calculate the potential of mean force (PMF) for the reorientation of melittin from a surface-bound state to a transmembrane state and provide a molecular level insight into understanding peptide and lipid properties that influence the existence of the free energy barrier. The PMFs were calculated for a peptide to lipid (P/L) ratio of 1/128 and 4/128. We observe that the free energy barrier is reduced when the P/L ratio increased. In addition, we study the cooperative effect; specifically we investigate if the barrier is smaller for a second melittin reorientation, given that another neighboring melittin was already in the transmembrane state. We observe that indeed the barrier of the PMF curve is reduced in this case, thus confirming the presence of a cooperative effect

Optically detected spin-orbit torque ferromagnetic resonance in an in-plane magnetized ellipse (article)

This is the author accepted manuscript. The final version is available from AIP Publishing via the DOI in this recordThe dataset associated with this article is available in ORE at: https://doi.org/10.24378/exe.3343Time-resolved scanning Kerr microscopy has been used to perform optically-detected, phaseresolved spin-orbit torque ferromagnetic resonance (SOT-FMR) measurements on a microscale CoFeB ellipse at the centre of a Pt Hall cross subject to RF and DC current. Time-resolved polar Kerr images revealed localized dynamics with large amplitude at the center, and weaker amplitude at the edges. Therefore, field swept SOT-FMR spectra were acquired from the so-called center mode to probe the SOTs active at the center of the ellipse, thus minimising non-uniform edge contributions. When the magnetic field was applied at 30° from the hard axis of the ellipse and a DC current applied, a marked asymmetry was observed in the amplitude and linewidth of the FMR peaks as the applied field was reversed. Both absorptive and dispersive parts of the spectra were in good agreement with a macrospin calculation. The damping parameter (α) and the Slonczewski torque parameter (ST) were determined to be 0.025 and (6.75±0.75)×10-7 Oe A-1 cm2 respectively. The hard axis SOT-FMR linewidth was found to be almost independent of the DC current value, suggesting that the SOT has minimal influence in the hard axis configuration and also that thermal effects were insignificant. This study paves the way to spatially-resolved measurements of SOT probed using localized modes of microscale devices that go beyond the spatially averaged capability of electrical measurement techniques.Engineering and Physical Sciences Research Council (EPSRC

Drillstring-borehole interaction: backward whirl instabilities and axial loading

A major concern within the oil drilling industry remains the interaction between the drillstring and borehole. The interaction between the drillstring and borehole wall involves nonlinearities in the form of friction and contact. The drillstring borehole interaction induces whirling behaviour of the drillstring causing forward whirl, backward whirl or intermittent bouncing behaviour depending on the system parameters. The purpose of this study is to analyse the steady backward whirl behaviour within the system which reduces the fatigue life of the drillstring. Initially a two discs model was developed to analyse the behaviour of the system. The theoretical model was tuned by altering the phase of the eccentric mass. This excites each lateral modes of the system in isolation. The effects of impact, friction and mass unbalance are included in the model. For the tuned system the backward whirl behaviour was analysed by carrying out a rotor speed sweep spanning the lateral natural frequencies. The influence of rotor speed on the system dynamics is explored using a run up and run down and is analysed using a waterfall plot. The waterfall plot indicated the frequency of maximum response corresponding to each rotor speed. Depending on the whirling behaviour the dominant frequency was observed at the lateral natural frequency, the rotational speed or the backward whirl frequency. The influence of variation in whirling behaviour due to altering of the axial load was analysed for a multiple disc case consisting of five discs. A transition in behaviour along the length of the drillstring was observed due to the axial load and bending moment interactions. Depending on the mode excited impact and sustained contact initiation with the borehole varied across the different stabilizer locations

Giant spin Hall effect in graphene grown by chemical vapour deposition

Advances in large-area graphene synthesis via chemical vapour deposition on metals like copper were instrumental in the demonstration of graphene-based novel, wafer-scale electronic circuits and proof-of-concept applications such as flexible touch panels. Here, we show that graphene grown by chemical vapour deposition on copper is equally promising for spintronics applications. In contrast to natural graphene, our experiments demonstrate that chemically synthesized graphene has a strong spin-orbit coupling as high as 20 meV giving rise to a giant spin Hall effect. The exceptionally large spin Hall angle ∼0.2 provides an important step towards graphene-based spintronics devices within existing complementary metal-oxide-semiconductor technology. Our microscopic model shows that unavoidable residual copper adatom clusters act as local spin-orbit scatterers and, in the resonant scattering limit, induce transverse spin currents with enhanced skew-scattering contribution. Our findings are confirmed independently by introducing metallic adatoms-copper, silver and gold on exfoliated graphene samples

Slow Dissociation of a Charged Ligand: Analysis of the Primary Quinone QA Site of Photosynthetic Bacterial Reaction Centers

Reaction centers (RCs) are integral membrane proteins that undergo a series of electron transfer reactions during the process of photosynthesis. In the QA site of RCs from Rhodobacter sphaeroides, ubiquinone-10 is reduced, by a single electron transfer, to its semiquinone. The neutral quinone and anionic semiquinone have similar affinities, which is required for correct in situ reaction thermodynamics. A previous study showed that despite similar affinities, anionic quinones associate and dissociate from the QA site at rates ≈104 times slower than neutral quinones indicating that anionic quinones encounter larger binding barriers (Madeo, J.; Gunner, M. R. Modeling binding kinetics at the QA site in bacterial reaction centers. Biochemistry2005, 44, 10994–11004). The present study investigates these barriers computationally, using steered molecular dynamics (SMD) to model the unbinding of neutral ground state ubiquinone (UQ) and its reduced anionic semiquinone (SQ–) from the QA site. In agreement with experiment, the SMD unbinding barrier for SQ– is larger than for UQ. Multi Conformational Continuum Electrostatics (MCCE), used here to calculate the binding energy, shows that SQ– and UQ have comparable affinities. In the QA site, there are stronger binding interactions for SQ– compared to UQ, especially electrostatic attraction to a bound non-heme Fe2+. These interactions compensate for the higher SQ– desolvation penalty, allowing both redox states to have similar affinities. These additional interactions also increase the dissociation barrier for SQ– relative to UQ. Thus, the slower SQ– dissociation rate is a direct physical consequence of the additional binding interactions required to achieve a QA site affinity similar to that of UQ. By a similar mechanism, the slower association rate is caused by stronger interactions between SQ– and the polar solvent. Thus, stronger interactions for both the unbound and bound states of charged and highly polar ligands can slow their binding kinetics without a conformational gate. Implications of this for other systems are discussed

Compulsory admissions of patients with mental disorders : State of the art on ethical and legislative aspects in 40 European countries

Background. Compulsory admission procedures of patients with mental disorders vary between countries in Europe. The Ethics Committee of the European Psychiatric Association (EPA) launched a survey on involuntary admission procedures of patients with mental disorders in 40 countries to gather information from all National Psychiatric Associations that are members of the EPA to develop recommendations for improving involuntary admission processes and promote voluntary care. Methods. The survey focused on legislation of involuntary admissions and key actors involved in the admission procedure as well as most common reasons for involuntary admissions. Results. We analyzed the survey categorical data in themes, which highlight that both medical and legal actors are involved in involuntary admission procedures. Conclusions. We conclude that legal reasons for compulsory admission should be reworded in order to remove stigmatization of the patient, that raising awareness about involuntary admission procedures and patient rights with both patients and family advocacy groups is paramount, that communication about procedures should be widely available in lay-language for the general population, and that training sessions and guidance should be available for legal and medical practitioners. Finally, people working in the field need to be constantly aware about the ethical challenges surrounding compulsory admissions.Peer reviewe