Taking the lead on climate change: Modelling and monitoring the fate of an Amazonian frog

Climate change is expected to have important impacts on biodiversity. However, cases showing explicit links between species decline and climate are scarce, mostly because of a lack of baseline data. Tropical ectotherms with narrow altitudinal ranges are particularly sensitive to climate change; for example the frog Pristimantis espedeus may be at risk, with only nine populations known to date in French Guiana, all on isolated massifs. Ecological niche modelling indicated that these populations could disappear by 2070. To facilitate testing of this prediction we conducted a study to design an efficient, cost-effective monitoring protocol, combining occupancy rate estimations using passive acoustic recorders, and abundance estimations using acoustic repeated counts and capture-mark-recapture. We found the passive recorders to be effective, with a detection probability of 0.8. Two recording sessions were sufficient to estimate occupancy rates reliably. A minimum of 57 surveyed sites were required to detect a decline of 15% in occupancy between two consecutive monitoring events. Acoustic repeated counts and capture-mark-recapture yielded similar density estimates (1.6 and 1.8 calling males per 100 m2, respectively). Based on these results we present a protocol based on passive acoustic recording and abundance monitoring to monitor P. espedeus populations

Nitrogen-rich indium nitride

Elastic recoil detection analysis, using an incident beam of 200 MeV Au ions, has been used to measureindium nitride films grown by radio-frequency sputtering. It is shown that the films have nitrogen-rich stoichiometry. Nitrogen vacancies are therefore unlikely to be responsible for the commonly observed high background carrier concentration. Ultraviolet Raman and secondary ion mass spectroscopymeasurements are used to probe the state of the excess nitrogen. The nitrogen on indium anti-site defect is implicated, though other possibilities for the site of the excess nitrogen, such as molecular nitrogen, or di-nitrogen interstitials cannot be excluded. It is further shown that a shift in the (0002) x-ray diffraction peak correlates with the excess nitrogen, but not with the oxygen observed in some samples.K.S.A.B. would like to acknowledge the support of an Australian Research Council Fellowship. We would also like to acknowledge the support of the Australian Research Council through a Large grant and a Discovery grant; the support of a Macquarie University Research Development Grant, and the Australian Institute of Nuclear Science and Engineering for SIMS access

Investigation of the solid/liquid phase transitions in the U–Pu–O system

Mixed oxides of uranium and plutonium U1-yPuyO2-x are currently studied as reference fuel for Sodium-cooled Fast Reactors (SFRs). To predict the margin to fuel melting, an accurate description of both solidus and liquidus temperatures of these materials is crucial. In this work, after a critical review of the literature data, the parameters of the liquid phase of the CALPHAD models of the Pu–O and U–Pu–O systems are reassessed based on the model of Gu´eneau et al.. A good agreement between the calculated and selected experimental data is obtained. Using this model, the melting behaviour of U1-yPuyO2±x oxides is then studied as a function of plutonium content and oxygen stoichiometry. The congruent melting for the mixed oxides is found to be shifted towards low O/M ratios compared to the end-members (UO1.97 and PuO1.95). The temperature of this congruent melting is nearly constant (3130–3140 K) along a ternary phase boundary from UO1.98 to U0.55Pu0.45O1.82 and then decreases with Pu content to a maximum of approximately 3040 K for PuO1.95. This observation is explained by the stabilisation of the hypo-stoichiometric mixed oxides due to the increase of the configurational entropy at high temperatures by the formation of oxygen vacancies and related cation mixing. The influence of the atmosphere used in the laser heating melting experiments on the oxygen stoichiometry of the sample and its solidus and liquidus temperatures is investigated. The determination of this O/M ratio after laser melting tests using XANES is also reported. The simultaneous presence of U6+, U5+, U4+, Pu3+ and Pu4+ is observed, highlighting the occurrence of charge compensation mechanisms. The samples are highly oxidised in air whereas close to stoichiometry (O/M = 2.00) in argon. These results are in agreement with the computed solidification paths. This work illustrates the complex melting behaviour of the U1-yPuyO2±x fuels and highlights the need for the CALPHAD method to accurately describe and predict the high-temperature transitions of the U–Pu–O system

Three-Dimensional Simulations of Jets from Keplerian Disks: Self--Regulatory Stability

We present the extension of previous two-dimensional simulations of the time-dependent evolution of non-relativistic outflows from the surface of Keplerian accretion disks, to three dimensions. The accretion disk itself is taken to provide a set of fixed boundary conditions for the problem. The 3-D results are consistent with the theory of steady, axisymmetric, centrifugally driven disk winds up to the Alfv\'en surface of the outflow. Beyond the Alfv\'en surface however, the jet in 3-D becomes unstable to non-axisymmetric, Kelvin-Helmholtz instabilities. We show that jets maintain their long-term stability through a self-limiting process wherein the average Alfv\'enic Mach number within the jet is maintained to order unity. This is accomplished in at least two ways. First, poloidal magnetic field is concentrated along the central axis of the jet forming a ``backbone'' in which the Alfv\'en speed is sufficiently high to reduce the average jet Alfv\'enic Mach number to unity. Second, the onset of higher order Kelvin-Helmholtz ``flute'' modes (m \ge 2) reduce the efficiency with which the jet material is accelerated, and transfer kinetic energy of the outflow into the stretched, poloidal field lines of the distorted jet. This too has the effect of increasing the Alfv\'en speed, and thus reducing the Alfv\'enic Mach number. The jet is able to survive the onset of the more destructive m=1 mode in this way. Our simulations also show that jets can acquire corkscrew, or wobbling types of geometries in this relatively stable end-state, depending on the nature of the perturbations upon them. Finally, we suggest that jets go into alternating periods of low and high activity as the disappearance of unstable modes in the sub-Alfv\'enic regime enables another cycle of acceleration to super-Alfv\'enic speeds.Comment: 57 pages, 22 figures, submitted to Ap

Salience not status: how category labels influence feature inference

Two main uses of categories are classification and feature inference, and category labels have been widely shown to play a dominant role in feature inference. However, the nature of this influence is unclear, and we evaluate two contrasting hypotheses formalized as mathematical models: the label special-mechanism hypothesis and the label super-salience hypothesis. The special-mechanism hypothesis is that category labels, unlike other features, trigger inference decision making in reference to the category prototypes. This results in a tendency for prototype-compatible inferences because the labels trigger a special mechanism rather than because of any influences they have on similarity evaluation. The super-salience hypothesis assumes that the large label influence is due to their high salience and corresponding impact on similarity without any need for a special mechanism. Application of the two models to a feature inference task based on a family resemblance category structure yields strong support for the label super-salience hypothesis and in particular does not support the need for a special mechanism based on prototypes

Transcriptional analysis of late ripening stages of grapevine berry

* Background: The composition of grapevine berry at harvest is a major determinant of wine quality. Optimal oenological maturity of berries is characterized by a high sugar/acidity ratio, high anthocyanin content in the skin, and low astringency. However, harvest time is still mostly determined empirically, based on crude biochemical composition and berry tasting. In this context, it is interesting to identify genes that are expressed/repressed specifically at the late stages of ripening and which may be used as indicators of maturity. * Results: Whole bunches and berries sorted by density were collected in vineyard on Chardonnay (white cultivar) grapevines for two consecutive years at three stages of ripening (7-days before harvest (TH-7), harvest (TH), and 10-days after harvest (TH+10)). Microvinification and sensory analysis indicate that the quality of the wines made from the whole bunches collected at TH-7, TH and TH+10 differed, TH providing the highest quality wines. In parallel, gene expression was studied with Qiagen/Operon microarrays using two types of samples, i.e. whole bunches and berries sorted by density. Only 12 genes were consistently up-or down-regulated in whole bunches and density sorted berries for the two years studied in Chardonnay. 52 genes were differentially expressed between the TH-7 and TH samples. In order to determine whether these genes followed a similar pattern of expression during the late stages of berry ripening in a red cultivar, nine genes were selected for RT-PCR analysis with Cabernet Sauvignon grown under two different temperature regimes affecting the precocity of ripening. The expression profiles and their relationship to ripening were confirmed in Cabernet Sauvignon for seven genes, encoding a carotenoid cleavage dioxygenase, a galactinol synthase, a late embryogenesis abundant protein, a dirigent-like protein, a histidine kinase receptor, a valencene synthase and a putative S-adenosyl-L-methionine: salicylic acid carboxyl methyltransferase. * Conclusions: This set of up-and down-regulated genes characterize the late stages of berry ripening in the two cultivars studied, and are indirectly linked to wine quality. They might be used directly or indirectly to design immunological, biochemical or molecular tools aimed at the determination of optimal ripening in these cultivars

Evidence for an X-Ray Jet in DG Tau A?

We present evidence for an X-ray jet in the T Tau star DG Tau A based on Chandra ACIS data. DG Tau A, a jet-driving classical T Tau star with a flat infrared spectrum, reveals an unusual X-ray spectrum that requires two thermal components with different intervening absorption column densities. The softer component shows a low temperature of T \approx 2.9 MK, and its absorption is compatible with the stellar optical extinction (hydrogen column density N_H \approx 5x10^21 cm^-2). In contrast, the harder component reveals a temperature (22 MK) characteristic for active T Tau stars but its emission is more strongly absorbed (N_H \approx 2.8x10^22 cm^-2). Furthermore, the high-resolution ACIS-S image reveals a weak excess of soft (0.5-2 keV) counts at distances of 2-4" from the star precisely along the optical jet, with a suggestive concentration at 4" where a bow-shock-like structure has previously been identified in optical line observations. The energy distribution of these photons is similar to those of the stellar soft component. We interpret the soft spectral component as originating from shocks at the base of the jet, with shock heating continuing out to a distance of at least 500 AU along the jet, whereas the hard component is most likely coronal/magnetospheric as in other young stellar systems.Comment: Accepted for publication in ApJ Letters, 12 pages, 2 figure

Discovery of a bipolar X-ray jet from the T Tauri star DG Tau

We have obtained and analyzed Chandra ACIS-S observations of the strongly accreting classical T Tauri star DG Tau. Our principal goals are to map the immediate environment of the star to characterize possible extended X-rays formed in the jet, and to re-visit the anomalous, doubly absorbed X-ray spectrum of DG Tau itself. We combine our new ACIS-S data with a data set previously obtained. The data are superimposed to obtain flux and hardness images. Separate X-ray spectra are extracted for DG Tau and areas outside its point spread function. We detect a prominent X-ray jet at a position angle of PA ~225 deg (tentatively suggested by Guedel et al. 2005), coincident with the optical jet axis. We also identify a counter jet at PA = 45 deg. The X-ray jets are detected out to a distance of ~5" from the star, their sources being extended at the ACIS-S resolution. The jet spectra are soft, with a best-fit electron temperature of 3.4 MK. We find evidence for excess absorption of the counter jet. The spectrum of the DG Tau point source shows two components with largely different temperatures and absorption column densities. The similar temperatures and small absorbing gas columns of the jet sources and the soft component of the "stellar" source suggest that these sources are related, produced either by shocks or by magnetic heating in the jets. Cooling estimates suggest that the pressure in the hot gas contributes to jet expansion. The hard "stellar" component, on the other hand, is associated with a stellar corona or magnetosphere. The excessive photoelectric absorption of this component suggests the presence of dust-depleted accretion streams above coronal magnetic fields.Comment: accepted by Astronomy & Astrophysics, 11 pages, 6 figure

Bruchpilot promotes active zone assembly, Ca2+-channel clustering, and vesicle release.

The molecular organization of presynaptic active zones during calcium influx - triggered neurotransmitter release is the focus of intense investigation. The Drosophila coiled-coil domain protein Bruchpilot (BRP) was observed in donut-shaped structures centered at active zones of neuromuscular synapses by using subdiffraction resolution STED ( stimulated emission depletion) fluorescence microscopy. At brp mutant active zones, electron-dense projections (T-bars) were entirely lost, Ca2+ channels were reduced in density, evoked vesicle release was depressed, and short-term plasticity was altered. BRP-like proteins seem to establish proximity between Ca2+ channels and vesicles to allow efficient transmitter release and patterned synaptic plasticity

A low energy demand scenario for meeting the 1.5 °C target and sustainable development goals without negative emission technologies

Scenarios that limit global warming to 1.5 °C describe major transformations in energy supply and ever-rising energy demand. Here, we provide a contrasting perspective by developing a narrative of future change based on observable trends that results in low energy demand. We describe and quantify changes in activity levels and energy intensity in the global North and global South for all major energy services. We project that global final energy demand by 2050 reduces to 245 EJ, around 40% lower than today, despite rises in population, income and activity. Using an integrated assessment modelling framework, we show how changes in the quantity and type of energy services drive structural change in intermediate and upstream supply sectors (energy and land use). Down-sizing the global energy system dramatically improves the feasibility of a low-carbon supply-side transformation. Our scenario meets the 1.5 °C climate target as well as many sustainable development goals, without relying on negative emission technologies