Effects of invisible particle emission on global inclusive variables at hadron colliders

We examine the effects of invisible particle emission in conjunction with QCD initial state radiation (ISR) on quantities designed to probe the mass scale of new physics at hadron colliders, which involve longitudinal as well as transverse final-state momenta. This is an extension of our previous treatment, arXiv:0903.2013, of the effects of ISR on global inclusive variables. We present resummed results on the visible invariant mass distribution and compare them to parton-level Monte Carlo results for top quark and gluino pair-production at the LHC. There is good agreement as long as the visible pseudorapidity interval is large enough (eta ~ 3). The effect of invisible particle emission is small in the case of top pair production but substantial for gluino pair production. This is due mainly to the larger mass of the intermediate particles in gluino decay (squarks rather than W-bosons). We also show Monte Carlo modelling of the effects of hadronization and the underlying event. The effect of the underlying event is large but may be approximately universal.Comment: 22 pages, expanded sections and other minor modifications. Version published in JHE

Alterations of brain activity associated with resolution of emotional distress and pain in a case of severe irritable bowel syndrome

: The association of psychosocial disturbances with more severe irritable bowel syndrome (IBS) is well recognized. However, there is no evidence as to how these associations might be mediated. Functional magnetic resonance imaging (fMRI) offers an opportunity to study whether activation of the cingulate cortex, an area involved with the affective and pain intensity coding might be linked to poorer clinical status with IBS. In this case report, we found an association between the severity of a patient's clinical symptoms and psychosocial state, with activation of the cingulate cortex. We also found that clinical and psychosocial improvement was associated with reduced cingulate activation. : Observational case report of a young woman observed for 16 years with a history of sexual abuse, psychosocial distress, and functional GI complaints. Psychosocial, clinical, and fMRI assessment was performed when the patient experienced severe symptoms and again 8 months later when clinically improved. : During severe illness, the patient had major psychosocial impairment, high life stress, a low visceral pain threshold, and activation of the midcingulate cortex (MCC), prefrontal area 6/44, and the somatosensory cortex, areas associated with pain intensity encoding. When clinically improved, there was resolution in activation of these 3 areas, and this was associated with psychosocial improvement and an increased threshold to rectal distention. : Activation of the MCC and related areas involved with visceral pain encoding are associated with poor clinical status in patients with severe IBS and psychosocial distress and appear to be responsive to clinical improvement.GASTROENTEROLOGY 2003;124:754-76

The HST/ACS Coma Cluster Survey. II. Data Description and Source Catalogs

The Coma cluster was the target of a HST-ACS Treasury program designed for deep imaging in the F475W and F814W passbands. Although our survey was interrupted by the ACS instrument failure in 2007, the partially completed survey still covers ~50% of the core high-density region in Coma. Observations were performed for 25 fields that extend over a wide range of cluster-centric radii (~1.75 Mpc) with a total coverage area of 274 arcmin^2. The majority of the fields are located near the core region of Coma (19/25 pointings) with six additional fields in the south-west region of the cluster. In this paper we present reprocessed images and SExtractor source catalogs for our survey fields, including a detailed description of the methodology used for object detection and photometry, the subtraction of bright galaxies to measure faint underlying objects, and the use of simulations to assess the photometric accuracy and completeness of our catalogs. We also use simulations to perform aperture corrections for the SExtractor Kron magnitudes based only on the measured source flux and half-light radius. We have performed photometry for ~73,000 unique objects; one-half of our detections are brighter than the 10-sigma point-source detection limit at F814W=25.8 mag (AB). The slight majority of objects (60%) are unresolved or only marginally resolved by ACS. We estimate that Coma members are 5-10% of all source detections, which consist of a large population of unresolved objects (primarily GCs but also UCDs) and a wide variety of extended galaxies from a cD galaxy to dwarf LSB galaxies. The red sequence of Coma member galaxies has a constant slope and dispersion across 9 magnitudes (-21<M_F814W<-13). The initial data release for the HST-ACS Coma Treasury program was made available to the public in 2008 August. The images and catalogs described in this study relate to our second data release.Comment: Accepted for publication in ApJS. A high-resolution version is available at http://archdev.stsci.edu/pub/hlsp/coma/release2/PaperII.pd

Short-term synaptic plasticity in the nociceptive thalamic-anterior cingulate pathway

<p>Abstract</p> <p>Background</p> <p>Although the mechanisms of short- and long-term potentiation of nociceptive-evoked responses are well known in the spinal cord, including central sensitization, there has been a growing body of information on such events in the cerebral cortex. In view of the importance of anterior cingulate cortex (ACC) in chronic pain conditions, this review considers neuronal plasticities in the thalamocingulate pathway that may be the earliest changes associated with such syndromes.</p> <p>Results</p> <p>A single nociceptive electrical stimulus to the sciatic nerve induced a prominent sink current in the layer II/III of the ACC <it>in vivo</it>, while high frequency stimulation potentiated the response of this current. Paired-pulse facilitation by electrical stimulation of midline, mediodorsal and intralaminar thalamic nuclei (MITN) suggesting that the MITN projection to ACC mediates the nociceptive short-term plasticity. The short-term synaptic plasticities were evaluated for different inputs <it>in vitro </it>where the medial thalamic and contralateral corpus callosum afferents were compared. Stimulation of the mediodorsal afferent evoked a stronger short-term synaptic plasticity and effectively transferred the bursting thalamic activity to cingulate cortex that was not true for contralateral stimulation. This short-term enhancement of synaptic transmission was mediated by polysynaptic pathways and NMDA receptors. Layer II/III neurons of the ACC express a short-term plasticity that involves glutamate and presynaptic calcium influx and is an important mechanism of the short-term plasticity.</p> <p>Conclusion</p> <p>The potentiation of ACC neuronal activity induced by thalamic bursting suggest that short-term synaptic plasticities enable the processing of nociceptive information from the medial thalamus and this temporal response variability is particularly important in pain because temporal maintenance of the response supports cortical integration and memory formation related to noxious events. Moreover, these modifications of cingulate synapses appear to regulate afferent signals that may be important to the transition from acute to chronic pain conditions associated with persistent peripheral noxious stimulation. Enhanced and maintained nociceptive activities in cingulate cortex, therefore, can become adverse and it will be important to learn how to regulate such changes in thalamic firing patterns that transmit nociceptive information to ACC in early stages of chronic pain.</p

Neural correlates of evidence accumulation during value-based decisions revealed via simultaneous EEG-fMRI

Current computational accounts posit that, in simple binary choices, humans accumulate evidence in favour of the different alternatives before committing to a decision. Neural correlates of this accumulating activity have been found during perceptual decisions in parietal and prefrontal cortex; however the source of such activity in value-based choices remains unknown. Here we use simultaneous EEG–fMRI and computational modelling to identify EEG signals reflecting an accumulation process and demonstrate that the within- and across-trial variability in these signals explains fMRI responses in posterior-medial frontal cortex. Consistent with its role in integrating the evidence prior to reaching a decision, this region also exhibits task-dependent coupling with the ventromedial prefrontal cortex and the striatum, brain areas known to encode the subjective value of the decision alternatives. These results further endorse the proposition of an evidence accumulation process during value-based decisions in humans and implicate the posterior-medial frontal cortex in this process

The Near-IR Luminosity Function and Bimodal Surface Brightness Distribution of Virgo Cluster Galaxies

We have acquired deep, H-band, imaging for a sample of 286 Virgo cluster galaxies with B <= 16 mag and extracted surface photometry from optical g,r,i,z Sloan Digital Sky Survey images of 742 Virgo Cluster Catalog galaxies, including those with H-band images. We confirm the detection of a dip in the luminosity function indicative of a discontinuity in the cluster galaxy population; the dip is more pronounced at redder wavelengths. We find, in agreement with earlier works of Tully & Verheijen and ours for Ursa Major cluster galaxies, a clear dichotomy between high and low surface brightness galaxy disks. The difference between the low and high brightness peaks of Virgo disk galaxies is ~2 H-mag arcsec^-2, significantly larger than any systematic errors. The high surface brightness disk galaxies have two distinct classes of high and low concentration bulges, while low surface brightness galaxies have only low concentration bulges. Early-type galaxies exhibit a similar structural bimodality though offset from that of the spiral galaxies towards higher surface brightnesses. Both the early- and late-type structural bimodalities are uncorrelated with colour or any other structural parameter except, possibly, circular velocity. The structural bimodality may be linked to dynamical properties of galaxies. Low angular momentum systems may collapse to form dynamically important disks with high surface brightness, while high angular momentum systems would end up as low surface brightness galaxies dominated by the dark halo at all radii. The confirmation of structural bimodality for gas-rich and gas-poor galaxies in the high-density Virgo cluster as well as the low-density UMa cluster suggests that this phenomenon is independent of environment.Comment: Accepted for publication in MNRA

Glioma Through the Looking GLASS: Molecular Evolution of Diffuse Gliomas and the Glioma Longitudinal AnalySiS Consortium

Adult diffuse gliomas are a diverse group of brain neoplasms that inflict a high emotional toll on patients and their families. The Cancer Genome Atlas (TCGA) and similar projects have provided a comprehensive understanding of the somatic alterations and molecular subtypes of glioma at diagnosis. However, gliomas undergo significant cellular and molecular evolution during disease progression. We review the current knowledge on the genomic and epigenetic abnormalities in primary tumors and after disease recurrence, highlight the gaps in the literature, and elaborate on the need for a new multi-institutional effort to bridge these knowledge gaps and how the Glioma Longitudinal AnalySiS Consortium (GLASS) aims to systemically catalog the longitudinal changes in gliomas. The GLASS initiative will provide essential insights into the evolution of glioma toward a lethal phenotype, with the potential to reveal targetable vulnerabilities, and ultimately, improved outcomes for a patient population in need

The role of catalyst acidity and shape selectivity on products from the catalytic fast pyrolysis of beech wood

The catalytic fast pyrolysis (CFP) of biomass represents an efficient integrated process to produce deoxygenated stable liquid fuels and valuable chemical products from lignocellulosic biomass. The zeolite ZSM-5 is a widely studied catalyst for the CFP process. However, its microporous structure may limit the diffusion of high molecular weight pyrolysis intermediates to its active sites. Mesoporous aluminosilicates such as Al-SBA-15 are promising materials with larger pore sizes that can overcome these diffusional limitations. Previous comparisons between mesoporous aluminosilicates and ZSM-5 for the CFP process have neglected the disproportionately high acidity of ZSM-5. In this study, an Al-SBA-15 catalyst has been synthesised with high acidity, comparable to that of a ZSM-5 catalyst with a Si:Al ratio of 15:1. The synthesised Al-SBA-15 catalyst was characterised by N2 physisorption, XRD and propylamine-TPD, and was compared to a ZSM-5 catalyst and a typical industrial equilibrium fluid catalytic cracking catalyst (e-FCC). All three catalysts were used at three different catalyst to biomass (C/B) ratios, to investigate the effect of varying concentrations of acid sites on the product distribution from the catalytic fast pyrolysis of beech wood. Interestingly, despite their dissimilar structural architectures, all three solid acid catalysts displayed similar reaction pathways towards the cracking of high molecular weight products such as levoglucosan and formation of intermediates including phenolics and furans. However, the selectivity towards the final catalytic products was dictated mainly by the structure of the catalysts. Despite their very similar surface area and acidity, the ZSM-5 exhibited high selectivity for the formation of desirable aromatic hydrocarbon products due to its shape-selective micropore structure, while Al-SBA-15 instead shifted the selectivity towards the formation of undesirable coke. The results highlighted the importance of catalyst shape-selectivity in the catalytic fast pyrolysis of biomass for the conversion of pyrolysis vapours into desirable products and the suppression of undesirable solid byproduct formation

Prevalence and architecture of de novo mutations in developmental disorders.

The genomes of individuals with severe, undiagnosed developmental disorders are enriched in damaging de novo mutations (DNMs) in developmentally important genes. Here we have sequenced the exomes of 4,293 families containing individuals with developmental disorders, and meta-analysed these data with data from another 3,287 individuals with similar disorders. We show that the most important factors influencing the diagnostic yield of DNMs are the sex of the affected individual, the relatedness of their parents, whether close relatives are affected and the parental ages. We identified 94 genes enriched in damaging DNMs, including 14 that previously lacked compelling evidence of involvement in developmental disorders. We have also characterized the phenotypic diversity among these disorders. We estimate that 42% of our cohort carry pathogenic DNMs in coding sequences; approximately half of these DNMs disrupt gene function and the remainder result in altered protein function. We estimate that developmental disorders caused by DNMs have an average prevalence of 1 in 213 to 1 in 448 births, depending on parental age. Given current global demographics, this equates to almost 400,000 children born per year

Prevalence, phenotype and architecture of developmental disorders caused by de novo mutation: The Deciphering Developmental Disorders Study

Individuals with severe, undiagnosed developmental disorders (DDs) are enriched for damaging de novo mutations (DNMs) in developmentally important genes. We exome sequenced 4,293 families with individuals with DDs, and meta-analysed these data with published data on 3,287 individuals with similar disorders. We show that the most significant factors influencing the diagnostic yield of de novo mutations are the sex of the affected individual, the relatedness of their parents and the age of both father and mother. We identified 94 genes enriched for damaging de novo mutation at genome-wide significance (P < 7 × 10−7), including 14 genes for which compelling data for causation was previously lacking. We have characterised the phenotypic diversity among these genetic disorders. We demonstrate that, at current cost differentials, exome sequencing has much greater power than genome sequencing for novel gene discovery in genetically heterogeneous disorders. We estimate that 42% of our cohort carry pathogenic DNMs (single nucleotide variants and indels) in coding sequences, with approximately half operating by a loss-of-function mechanism, and the remainder resulting in altered-function (e.g. activating, dominant negative). We established that most haplo insufficient developmental disorders have already been identified, but that many altered-function disorders remain to be discovered. Extrapolating from the DDD cohort to the general population, we estimate that developmental disorders caused by DNMs have an average birth prevalence of 1 in 213 to 1 in 448 (0.22-0.47% of live births), depending on parental age