24 research outputs found
Induction of radiata pine somatic embryogenesis at high temperatures provokes a long-term decrease in dna methylation/hydroxymethylation and differential expression of stress-related genes
Based on the hypothesis that embryo development is a crucial stage for the formation of stable epigenetic marks that could modulate the behaviour of the resulting plants, in this study, radiata pine somatic embryogenesis was induced at high temperatures (23¿ C, eight weeks, control; 40¿ C, 4 h; 60¿ C, 5 min) and the global methylation and hydroxymethylation levels of emerging embryonal masses and somatic plants were analysed using LC-ESI-MS/ MS-MRM. In this context, the expression pattern of six genes previously described as stress-mediators was studied throughout the embryogenic process until plant level to assess whether the observed epigenetic changes could have provoked a sustained alteration of the transcriptome. Results indicated that the highest temperatures led to hypomethylation of both embryonal masses and somatic plants. Moreover, we detected for the first time in a pine species the presence of 5-hydroxymethylcytosine, and revealed its tissue specificity and potential involvement in heat-stress responses. Additionally, a heat shock protein-coding gene showed a down-regulation tendency along the process, with a special emphasis given to embryonal masses at first subculture and ex vitro somatic plants. Likewise, the transcripts of several proteins related with translation, oxidative stress response, and drought resilience were differentially expressed
Dynamics of Coronal Bright Points as seen by Sun Watcher using Active Pixel System detector and Image Processing (SWAP), Atmospheric Imaging Assembly AIA), and Helioseismic and Magnetic Imager (HMI)
The \textit{Sun Watcher using Active Pixel system detector and Image
Processing}(SWAP) on board the \textit{PRoject for OnBoard Autonomy\todash 2}
(PROBA\todash 2) spacecraft provides images of the solar corona in EUV channel
centered at 174 \AA. These data, together with \textit{Atmospheric Imaging
Assembly} (AIA) and the \textit{Helioseismic and Magnetic Imager} (HMI) on
board \textit{Solar Dynamics Observatory} (SDO), are used to study the dynamics
of coronal bright points. The evolution of the magnetic polarities and
associated changes in morphology are studied using magnetograms and
multi-wavelength imaging. The morphology of the bright points seen in
low-resolution SWAP images and high-resolution AIA images show different
structures, whereas the intensity variations with time show similar trends in
both SWAP 174 and AIA 171 channels. We observe that bright points are seen in
EUV channels corresponding to a magnetic-flux of the order of Mx. We
find that there exists a good correlation between total emission from the
bright point in several UV\todash EUV channels and total unsigned photospheric
magnetic flux above certain thresholds. The bright points also show periodic
brightenings and we have attempted to find the oscillation periods in bright
points and their connection to magnetic flux changes. The observed periods are
generally long (10\todash 25 minutes) and there is an indication that the
intensity oscillations may be generated by repeated magnetic reconnection
Signatures of the slow solar wind streams from active regions in the inner corona
Some of local sources of the slow solar wind can be associated with
spectroscopically detected plasma outflows at edges of active regions
accompanied with specific signatures in the inner corona. The EUV telescopes
(e.g. SPIRIT/CORONAS-F, TESIS/CORONAS-Photon and SWAP/PROBA2) sometimes
observed extended ray-like structures seen at the limb above active regions in
1MK iron emission lines and described as "coronal rays". To verify the
relationship between coronal rays and plasma outflows, we analyze an isolated
active region (AR) adjacent to small coronal hole (CH) observed by different
EUV instruments in the end of July - beginning of August 2009. On August 1 EIS
revealed in the AR two compact outflows with the Doppler velocities V =10-30
km/s accompanied with fan loops diverging from their regions. At the limb the
ARCH interface region produced coronal rays observed by EUVI/STEREO-A on July
31 as well as by TESIS on August 7. The rays were co-aligned with open magnetic
field lines expanded to the streamer stalks. Using the DEM analysis, it was
found that the fan loops diverged from the outflow regions had the dominant
temperature of ~1 MK, which is similar to that of the outgoing plasma streams.
Parameters of the solar wind measured by STEREO-B, ACE, WIND, STEREO-A were
conformed with identification of the ARCH as a source region at the
Wang-Sheeley-Arge map of derived coronal holes for CR 2086. The results of the
study support the suggestion that coronal rays can represent signatures of
outflows from ARs propagating in the inner corona along open field lines into
the heliosphere.Comment: Accepted for publication in Solar Physics; 31 Pages; 13 Figure
Team dynamics in emergency surgery teams: results from a first international survey
Background: Emergency surgery represents a unique context. Trauma teams are often multidisciplinary and need to operate under extreme stress and time constraints, sometimes with no awareness of the trauma\u2019s causes or the patient\u2019s personal and clinical information. In this perspective, the dynamics of how trauma teams function is fundamental to ensuring the best performance and outcomes. Methods: An online survey was conducted among the World Society of Emergency Surgery members in early 2021. 402 fully filled questionnaires on the topics of knowledge translation dynamics and tools, non-technical skills, and difficulties in teamwork were collected. Data were analyzed using the software R, and reported following the Checklist for Reporting Results of Internet E-Surveys (CHERRIES). Results: Findings highlight how several surgeons are still unsure about the meaning and potential of knowledge translation and its mechanisms. Tools like training, clinical guidelines, and non-technical skills are recognized and used in clinical practice. Others, like patients\u2019 and stakeholders\u2019 engagement, are hardly implemented, despite their increasing importance in the modern healthcare scenario. Several difficulties in working as a team are described, including the lack of time, communication, training, trust, and ego. Discussion: Scientific societies should take the lead in offering training and support about the abovementioned topics. Dedicated educational initiatives, practical cases and experiences, workshops and symposia may allow mitigating the difficulties highlighted by the survey\u2019s participants, boosting the performance of emergency teams. Additional investigation of the survey results and its characteristics may lead to more further specific suggestions and potential solutions
Observation of inverse Compton emission from a long γ-ray burst.
Long-duration γ-ray bursts (GRBs) originate from ultra-relativistic jets launched from the collapsing cores of dying massive stars. They are characterized by an initial phase of bright and highly variable radiation in the kiloelectronvolt-to-megaelectronvolt band, which is probably produced within the jet and lasts from milliseconds to minutes, known as the prompt emission1,2. Subsequently, the interaction of the jet with the surrounding medium generates shock waves that are responsible for the afterglow emission, which lasts from days to months and occurs over a broad energy range from the radio to the gigaelectronvolt bands1-6. The afterglow emission is generally well explained as synchrotron radiation emitted by electrons accelerated by the external shock7-9. Recently, intense long-lasting emission between 0.2 and 1 teraelectronvolts was observed from GRB 190114C10,11. Here we report multi-frequency observations of GRB 190114C, and study the evolution in time of the GRB emission across 17 orders of magnitude in energy, from 5 × 10-6 to 1012 electronvolts. We find that the broadband spectral energy distribution is double-peaked, with the teraelectronvolt emission constituting a distinct spectral component with power comparable to the synchrotron component. This component is associated with the afterglow and is satisfactorily explained by inverse Compton up-scattering of synchrotron photons by high-energy electrons. We find that the conditions required to account for the observed teraelectronvolt component are typical for GRBs, supporting the possibility that inverse Compton emission is commonly produced in GRBs
Observations of the Sun at Vacuum-Ultraviolet Wavelengths from Space. Part II: Results and Interpretations
Empirical Bayes and Fully Bayes procedures to detect high-risk areas in disease mapping
Disease mapping studies have experienced an enormous development in the last twenty years. Both an Empirical Bayes (EB) and a Fully Bayes (FB) approach have been used for smoothing purposes. However, an excess of smoothing might hinder the detection of true high-risk areas. Identifying these extreme regions minimizing the misclassification of background or normal areas, and then, avoiding false alarms is crucial in epidemiology. Bayesian decision rules, based on the posterior distribution of the relative risks, have been investigated for this task, but no similar studies have been conducted under the EB approach. Within this framework, second order correct estimators of the MSE of the log-relative risk predictor can be used to build appropriate confidence intervals for the relative risks. Their ability to detect high-risk areas is investigated through a simulation study using the geographical structure of the well-known Scottish lip cancer data. Bayesian credibility intervals and decision rules, based on the posterior distribution of the relative risks, are also investigated to check if any of the approaches outperforms the others when classifying high-risk regions. The conclusion is that Bayesian decision rules, exploiting the posterior distribution of the relative risks, are more powerful to detect high-risk areas than EB confidence intervals, but no general rules can be defined as a global criterion to be routinely applied in every real setting.
Spline smoothing in small area trend estimation and forecasting
Semiparametric models combining both non-parametric trends and small area random effects are now currently being investigated in small area estimation (SAE). These models can prevent bias when the functional form of the relationship between the response and the covariates is unknown. Furthermore, penalized spline regression can be a good tool to incorporate non-parametric regression models into the SAE techniques, as it can be represented as a mixed effects model. A penalized spline model is considered to analyze trends in small areas and to forecast future values of the response. The prediction mean squared error (MSE) for the fitted and the predicted values, together with estimators for those quantities, are derived. The procedure is illustrated with real data consisting of average prices per squared meter of used dwellings in nine neighborhoods of the city of Vitoria, Spain, during the period 1993-2007. Dwelling prices for the next five years are also forecast. A simulation study is conducted to assess the performance of both the small area trend estimator and the prediction MSE estimators. The results confirm a good behavior of the proposed estimators in terms of bias and variability.
Unpaired spatio-temporal fusion of image patches (USTFIP) from cloud covered images
Spatio-temporal image fusion aims to increase the frequency and resolution of multispectral satellite sensor images in a cost-effective manner. However, practical constraints on input data requirements and computational cost prevent a wider adoption of these methods in real case-studies. We propose an ensemble of strategies to eliminate the need for cloud-free matching pairs of satellite sensor images. The new methodology called Unpaired Spatio-Temporal Fusion of Image Patches (USTFIP) is tested in situations where classical requirements are progressively difficult to meet. Overall, the study shows that USTFIP reduces the root mean square error by 2-to-13% relative to the state-of-the-art Fit-FC fusion method, due to an efficient use of the available information. Implementation of USTFIP through parallel computing saves up to 40% of the computational time required for Fit-FC