Graph run-length matrices for histopathological image segmentation

Cataloged from PDF version of article.The histopathological examination of tissue specimens is essential for cancer diagnosis and grading. However, this examination is subject to a considerable amount of observer variability as it mainly relies on visual interpretation of pathologists. To alleviate this problem, it is very important to develop computational quantitative tools, for which image segmentation constitutes the core step. In this paper, we introduce an effective and robust algorithm for the segmentation of histopathological tissue images. This algorithm incorporates the background knowledge of the tissue organization into segmentation. For this purpose, it quantifies spatial relations of cytological tissue components by constructing a graph and uses this graph to define new texture features for image segmentation. This new texture definition makes use of the idea of gray-level run-length matrices. However, it considers the runs of cytological components on a graph to form a matrix, instead of considering the runs of pixel intensities. Working with colon tissue images, our experiments demonstrate that the texture features extracted from "graph run-length matrices" lead to high segmentation accuracies, also providing a reasonable number of segmented regions. Compared with four other segmentation algorithms, the results show that the proposed algorithm is more effective in histopathological image segmentatio

Towards an operationalization of test-driven development skills: An industrial empirical study

Abstract Context: The majority of the empirical studies on Test-driven development (TDD) are concerned with verifying or refuting the effectiveness of the technique over a traditional approach, and they tend to neglect whether the subjects possess the necessary skills to apply TDD, though they argue such skills are necessary. Objective: We evaluate a set of minimal, a priori and in process skills necessary to apply TDD. We determine whether variations in external quality (i.e., number of defects) and productivity (i.e., number of features implemented) can be associated with different clusters of the TDD skills? set. Method: We executed a quasi-experiment involving 30 practitioners from industry. We first grouped the participants according to their TDD skills? set (consisting of a priori experience on programming and testing as well as in-process TDD conformance) into three levels (Low-Medium-High) using k-means clustering. We then applied ANOVA to compare the clusters in terms of external quality and productivity, and conducted post-hoc pairwise analysis. Results: We did not observe a statistically significant difference between the clusters either for external software quality ( F ( 2 , 27 = 1.44 , p = . 260 ), or productivity ( F ( 2 , 27 ) = 3.02 , p = . 065 ). However, the analysis of the effect sizes and their confidence intervals shows that the TDD skills? set is a factor that could account for up to 28% of the external quality, and 38% for productivity. Conclusion: We have reason to conclude that focusing on the improvement of TDD skills? set investigated in this study could benefit software developers in improving their baseline productivity and the external quality of the code they produce. However, replications are needed to overcome the issues related with the statistical power of this study. We suggest practical insights for future work to investigate the phenomenon further.hisresearchispartiallysupportedbytheAcademyofFinlandwithdecisionno.:278354,andbyFinnishDistinguishedProfessor(Fi.Di.Pro.) programme, ESEIL

Proportionate and disproportionate policy responses to climate change: core concepts and empirical applications

A fresh perspective on policy-making and planning has emerged which views disproportionate policy as an intentional policy response. A disproportionate policy response is understood to be a lack of‘fit’or balance between the costs of a public policy and the benefits that are derived from this policy, and between policy ends and means. This paper applies this new perspective on the proportionality of policy-making to the area of climate change. The first part of the paper discusses the underlying causes of disproportionate policy responses in broad terms and then applies the theoretical reasoning to understand the conditions in which they are likely to appear in relation to climate change. These conditions are hypothesized to relate to four main factors: economic considerations; levels of public demand; focusing events; and strategic considerations. It concludes with the suggestion that societal actors may be able to manipulate these four factors to encourage politicians to adopt policies that mitigate climate change more rapidly than is currently the case in most countries

Perceived economic self‑sufficiency: a countryand generation‑comparative approach

We thank Michael Camasso and Radha Jagannathan as well as Asimina Christoforou, Gerbert Kraaykamp, Fay Makantasi, Tiziana Nazio, Kyriakos Pierrakakis, Jacqueline O’Reilly and Jan van Deth for their contribution to the CUPESSE project (Seventh Framework Programme; Grant Agreement No. 61325). CUPESSE received additional funding from the Mannheim Centre for European Social Research (MZES) and the Field of Focus 4 “Self-Regulation and Regulation: Individuals and Organisations” at Heidelberg University. We further acknowledge helpful comments on this article by two anonymous reviewers. Julian Rossello provided valuable research assistance.Electronic supplementary material The online version of this article (https ://doi.org/10.1057/ s4130 4-018-0186-3) contains supplementary material, which is available to authorized users.Existing datasets provided by statistical agencies (e.g. Eurostat) show that the economic and financial crisis that unfolded in 2008 significantly impacted the lives and livelihoods of young people across Europe. Taking these official statistics as a starting point, the collaborative research project “Cultural Pathways to Economic Self-Sufficiency and Entrepreneurship in Europe” (CUPESSE) generated new survey data on the economic and social situation of young Europeans (18–35 years). The CUPESSE dataset allows for country-comparative assessments of young people’s perceptions about their socio-economic situation. Furthermore, the dataset includes a variety of indicators examining the socio-economic situation of both young adults and their parents. In this data article, we introduce the CUPESSE dataset to political and social scientists in an attempt to spark a debate on the measurements, patterns and mechanisms of intergenerational transmission of economic self-sufficiency as well as its political implications.CUPESSE project (Seventh Framework Programme; Grant Agreement No. 61325

An industry experiment on the effects of test-driven development on external quality and productivity

Existing empirical studies on test-driven development (TDD) report different conclusions about its effects on quality and productivity. Very few of those studies are experiments conducted with software professionals in industry. We aim to analyse the effects of TDD on the external quality of the work done and the productivity of developers in an industrial setting. We conducted an experiment with 24 professionals from three different sites of a software organization. We chose a repeated-measures design, and asked subjects to implement TDD and incremental test last development (ITLD) in two simple tasks and a realistic application close to real-life complexity. To analyse our findings, we applied a repeated-measures general linear model procedure and a linear mixed effects procedure. We did not observe a statistical difference between the quality of the work done by subjects in both treatments. We observed that the subjects are more productive when they implement TDD on a simple task compared to ITLD, but the productivity drops significantly when applying TDD to a complex brownfield task. So, the task complexity significantly obscured the effect of TDD. Further evidence is necessary to conclude whether TDD is better or worse than ITLD in terms of external quality and productivity in an industrial setting. We found that experimental factors such as selection of tasks could dominate the findings in TDD studies.This research has been partly funded by Spanish Ministry of Science and Innovation projects TIN2011-23216, the Distinguished Professor Program of Tekes, and the Academy of Finland (Grant Decision No. 260871)

Grain rotation and lattice deformation during perovskite spray coating and annealing probed in situ by GI-WAXS

We report for the first time on grain rotation in CH3NH3PbI3 perovskite films for ∼12% efficient planar solar cells and present a new method for investigating their texture evolution during thermal annealing. Our technique is based on in situ 2D grazing incidence wide-angle X-ray scattering (GI-WAXS) and employs a 10 keV wide-focussed X-ray beam to simultaneously probe a large number of grains. The ability to track the texture dynamics from a statistically relevant number of spots diffracting from single grains during thermal annealing and in grazing incidence geometry can have applications understanding the processing dynamics of a range of new materials

Screening of chickpea accessions for resistance against the pulse beetle, Callosobruchus chinensis L. (Coleoptera: Bruchidae)

During storage, chickpea (Cicer arietinum L.) is severely attacked by some bruchid species, especially Callosobruchus chinensis L. (Coleoptera: Bruchidae), resulting in losses in quantity and nutritional quality. In the present study, three species of Cicer including five accessions of Cicer arietinum L. (three kabuli and two desi chickpeas), four accessions of C. echinospermum P.H. Davis and five accessions of C. reticulatum Ladiz. were screened for resistance to C. chinensis in both free-choice and no-choice tests in the laboratory. Resistance was evaluated by measuring oviposition (number of eggs per seed), adult emergence (number of holes per seed), damaged seed rate and seed weight loss (%). The results revealed that no eggs were laid by the bruchid females to the C. echinospermum accessions in free-choice test, but in no-choice test only two C. echinospermum accessions (AWC 304 and AWC 305) had few eggs (4.3 and 3.3 eggs/seed, respectively). The highest rate of oviposition occurred in kabuli chickpeas, especially in YAR (25.1 eggs/seed in free-choice test). The accessions exhibited a similar pattern for adult emergence like in the oviposition rates. As for damaged seed rate, no damage was observed in both tests in the C. echinospermum accessions, except AWC 304 (6.7%) in no-choice test. The highest seed damage was seen in kabuli-type accessions, being 100% in YAR and ILC 8617. Considering seed weight loss, no weight loss occurred in the C. echinospermum accessions in both tests (except, AWC 304 in no-choice test) whereas the highest weight loss was seen in the kabuli-type accession, CA 2969 (28.6%) in free-choice test and in the desi type accession, ICC 4957 (35.0%) in no-choice test. Since lower numbers of eggs were laid on hairy, wrinkled/reticulated and dark seed accessions, these features seemed to be important in the preference of the bruchid for host selection and oviposition. These results suggest that resistant varieties can be used as gene sources in breeding new cultivars resistant to C. chinensis

The tourism and economic growth enigma: Examining an ambiguous relationship through multiple prisms

This paper revisits the ambiguous relationship between tourism and economic growth, providing a comprehensive study of destinations across the globe which takes into account the key dynamics that influence tourism and economic performance. We focus on 113 countries over the period 1995-2014, clustered, for the first time, around six criteria that reflect their economic, political and tourism dimensions. A Panel Vector Autoregressive model is employed which, in contrast to previous studies, allows the data to reveal any tourism-economy interdependencies across these clusters, without imposing a priori the direction of causality. Overall, the economic-driven tourism growth hypothesis seems to prevail in countries which are developing, non-democratic, highly bureaucratic and have low tourism specialization. Conversely, bidirectional relationships are established for economies which are stronger, democratic and with higher levels of government effectiveness. Thus, depending on the economic, political and tourism status of a destination, different policy implications apply

The Atlantic Bonito ( Sarda sarda,Bloch 1793) Transcriptome and Detection of Differential Expression during Larvae Development

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