The isolation of differentially expressed cDNA clones from the filarial nematode <i>Brugia pahangi</i>

A cDNA library constructed from 3 day post-infective L3 of the filarial nematode Brugia pahangi was screened by differential hybridization with cDNA probes prepared from different life-cycle stages. Five cDNA clones hybridizing selectively to the mosquito-derived L3 probe were isolated and characterized. Northern blot analysis of 4 of the clones confirmed that each was most highly expressed in the mosquito-derived L3. The expression of each mRNA during parasite development in the mosquito vector was investigated using RT-PCR, and all were shown to be abundant in the immature L3. Four of the 5 cDNAs cloned coded for structural proteins: 2 cuticular collagens, and the muscle proteins tropomyosin and troponin. Further studies on troponin using an antiserum raised to the recombinant protein demonstrated that the protein, unlike the mRNA, was present in all life-cycle stages examined, while immunogold labelling demonstrated that it was localized to the muscle blocks

Accounting for the foreground contribution to the dust emission towards Kepler's supernova remnant

‘The definitive version is available at www3.interscience.wiley.com '. Copyright Royal Astronomical Society. DOI: 10.1111/j.1365-2966.2009.15061.xWhether or not supernovae contribute significantly to the overall dust budget is a controversial subject. Submillimetre (sub-mm) observations, sensitive to cold dust, have shown an excess at 450 and 850 μm in young remnants Cassiopeia A (Cas A) and Kepler. Some of the sub-mm emission from Cas A has been shown to be contaminated by unrelated material along the line of sight. In this paper, we explore the emission from material towards Kepler using sub-mm continuum imaging and spectroscopic observations of atomic and molecular gas, via H i, 12CO(J= 2–1) and 13CO(J= 2–1). We detect weak CO emission (peak T*A = 0.2–1 K, 1–2 km s−1 full width at half-maximum) from diffuse, optically thin gas at the locations of some of the sub-mm clumps. The contribution to the sub-mm emission from foreground molecular and atomic clouds is negligible. The revised dust mass for Kepler's remnant is 0.1–1.2 M⊙ , about half of the quoted values in the original study by Morgan et al., but still sufficient to explain the origin of dust at high redshifts.Peer reviewe

Culture change in a professional sports team: Shaping environmental contexts and regulating power

Although high performing cultures are crucial for the enduring success of professional sport performance teams, theoretical and practical understanding of how they are established and sustained is lacking. To develop knowledge in this area, a case study was undertaken to examine the key mechanisms and processes of a successful culture change programme at English Rugby Union’s Leeds Carnegie. Exploring the change process from a 360 degree perspective, semi-structured interviews were conducted with team management, one specialist coach, six players, and the CEO. Analysed and explained through decentred theory, results revealed that culture change was effectively facilitated by team management: a) subtly and covertly shaping the physical, structural, and psychosocial context in which support staff and players made performance-impacting choices, and b) regulating the ‘to and fro’ of power which characterises professional sport performance teams. Decentred theory is also supported as an effective framework for culture change study

A latent profile analysis of math achievement, numerosity, and math anxiety in twins.

Underperformance in math is a problem with increasing prevalence, complex etiology, and severe repercussions. This study examined the etiological heterogeneity of math performance in a sample of 264 pairs of 12-year-old twins assessed on measures of math achievement, numerosity and math anxiety. Latent profile analysis indicated five groupings of individuals representing different patterns of math achievement, numerosity and math anxiety, coupled with differing degrees of familial transmission. These results suggest that there may be distinct profiles of math achievement, numerosity and anxiety; particularly for students who struggle in math

Constraining fundamental constants of physics with quasar absorption line systems

We summarize the attempts by our group and others to derive constraints on variations of fundamental constants over cosmic time using quasar absorption lines. Most upper limits reside in the range 0.5-1.5x10-5 at the 3sigma level over a redshift range of approximately 0.5-2.5 for the fine-structure constant, alpha, the proton-to-electron mass ratio, mu, and a combination of the proton gyromagnetic factor and the two previous constants, gp(alpha^2/mu)^nu, for only one claimed variation of alpha. It is therefore very important to perform new measurements to improve the sensitivity of the numerous methods to at least <0.1x10-5 which should be possible in the next few years. Future instrumentations on ELTs in the optical and/or ALMA, EVLA and SKA pathfinders in the radio will undoutedly boost this field by allowing to reach much better signal-to-noise ratios at higher spectral resolution and to perform measurements on molecules in the ISM of high redshift galaxies.Comment: 11 pages, 3 figure

Self-optimization, community stability, and fluctuations in two individual-based models of biological coevolution

We compare and contrast the long-time dynamical properties of two individual-based models of biological coevolution. Selection occurs via multispecies, stochastic population dynamics with reproduction probabilities that depend nonlinearly on the population densities of all species resident in the community. New species are introduced through mutation. Both models are amenable to exact linear stability analysis, and we compare the analytic results with large-scale kinetic Monte Carlo simulations, obtaining the population size as a function of an average interspecies interaction strength. Over time, the models self-optimize through mutation and selection to approximately maximize a community fitness function, subject only to constraints internal to the particular model. If the interspecies interactions are randomly distributed on an interval including positive values, the system evolves toward self-sustaining, mutualistic communities. In contrast, for the predator-prey case the matrix of interactions is antisymmetric, and a nonzero population size must be sustained by an external resource. Time series of the diversity and population size for both models show approximate 1/f noise and power-law distributions for the lifetimes of communities and species. For the mutualistic model, these two lifetime distributions have the same exponent, while their exponents are different for the predator-prey model. The difference is probably due to greater resilience toward mass extinctions in the food-web like communities produced by the predator-prey model.Comment: 26 pages, 12 figures. Discussion of early-time dynamics added. J. Math. Biol., in pres

Star formation in molecular cores

We investigate the effect of the turbulent power spectrum ( $P(k) \propto k^{-n}$, with $n = 3,\,4\;{\rm or}\;5$) on the fragmentation of low-mass cores, by means of SPH simulations. We adopt initial density profiles and low levels of turbulence based on observation, and for each n-value we conduct an ensemble of simulations with different initial seeds for the turbulent velocity field, so as to obtain reasonable statistics. We find that when power is concentrated at larger scales (i.e. for larger n), more protostellar objects form and there is a higher proportion of low-mass stars and brown dwarfs. This is in direct contrast with the recent results of Delgado Donate et al., presumably because they adopted much higher levels of turbulence

Higher moments of nucleon spin structure functions in heavy baryon chiral perturbation theory and in a resonance model

The third moment $d_2$ of the twist-3 part of the nucleon spin structure function $g_2$ is generalized to arbitrary momentum transfer $Q^2$ and is evaluated in heavy baryon chiral perturbation theory (HBChPT) up to order ${\mathcal{O}}(p^4)$ and in a unitary isobar model (MAID). We show how to link $d_2$ as well as higher moments of the nucleon spin structure functions $g_1$ and $g_2$ to nucleon spin polarizabilities. We compare our results with the most recent experimental data, and find a good description of these available data within the unitary isobar model. We proceed to extract the twist-4 matrix element $f_2$ which appears in the $1/Q^2$ suppressed term in the twist expansion of the spin structure function $g_1$ for proton and neutron.Comment: 30 pages, 7 figure

Analysis of bilinear oscillators under harmonic loading using nonlinear output frequency response functions

In this paper, the new concept of Nonlinear Output Frequency Response Functions (NOFRFs) is extended to the harmonic input case, an input-independent relationship is found between the NOFRFs and the Generalized Frequency Response Functions (GFRFs). This relationship can greatly simplify the application of the NOFRFs. Then, beginning with the demonstration that a bilinear oscillator can be approximated using a polynomial type nonlinear oscillator, the NOFRFs are used to analyze the energy transfer phenomenon of bilinear oscillators in the frequency domain. The analysis provides insight into how new frequency generation can occur using bilinear oscillators and how the sub-resonances occur for the bilinear oscillators, and reveals that it is the resonant frequencies of the NOFRFs that dominate the occurrence of this well-known nonlinear behaviour. The results are of significance for the design and fault diagnosis of mechanical systems and structures which can be described by a bilinear oscillator model

Improved genetic algorithm for multiple sequence alignment using segment profiles (GASP)

This paper presents a novel genetic algorithm (GA) for multiple sequence alignment in protein analysis. The most significant improvement afforded by this algorithm results from its use of segment profiles to generate the diversified initial population and prevent the destruction of conserved regions by crossover and mutation operations. Segment profiles contain rich local information, thereby speeding up convergence. Secondly, it introduces the use of the norMD function in a genetic algorithm to measure multiple alignment Finally, as an approach to the premature problem, an improved progressive method is used to optimize the highest-scoring individual of each new generation. The new algorithm is compared with the ClustalX and T-Coffee programs on several data cases from the BAliBASE benchmark alignment database. The experimental results show that it can yield better performance on data sets with long sequences, regardless of similarity