Stratosphere-troposphere transport in a numerical simulation of midlatitude convection

The transport of stratospheric air deep into the troposphere via convection is investigated numerically using the UK Met Office Unified Model. A convective system that formed on 27 June 2004 near southeast England, in the vicinity an upper level potential vorticity anomaly and a lowered tropopause, provides the basis for analysis. Transport is diagnosed using a stratospheric tracer that can either be passed through or withheld from the model’s convective parameterization scheme. Three simulations are performed at increasingly finer resolutions, with horizontal grid lengths of 12, 4, and 1 km. In the 12 and 4 km simulations, tracer is transported deeply into the troposphere by the parameterized convection. In the 1 km simulation, for which the convective parameterization is disengaged, deep transport is still accomplished but with a much smaller magnitude. However, the 1 km simulation resolves stirring along the tropopause that does not exist in the coarser simulations. In all three simulations, the concentration of the deeply transported tracer is small, three orders of magnitude less than that of the shallow transport near the tropopause, most likely because of the efficient dilution of parcels in the lower troposphere

Satellite detection of volcanic ash from Eyjafjallajökull and the threat to aviation

Earth orbiting satellites provide an excellent means for monitoring and measuring emissions from volcanic eruptions. The recent eruption of Eyjafjallajökull in Iceland on 14 April, 2010 and the subsequent movement of the ash clouds were tracked using a variety of satellite instruments as they moved over Europe. Data from the rapid sampling (every 15 minutes) SEVIRI on Meteosat Second Generation were especially useful during this event as the thermal channels between 10–12 micron could be used to detect the ash signal and perform quantitative ash retrievals of mass loadings, optical depths and effective particle size. Higher-spatial resolution ( 1 km2) information from the MODIS sensors on NASA’s Terra and Aqua platforms were also analysed to determine ash microphysics and also to provide ash cloud top height. High-spectral resolution data from the IASI and AIRS sensors showed that initially quantities of ice, potentially with ash cores, were present, and that multi-species retrievals could be performed by exploiting the spectral content of the data. Vertically resolved ash layers were detected using the Caliop lidar on board the Calipso platform. Ash was clearly detected over Europe using the infra-red sensors with mass loadings typically in the range 0.1–5 gm-2, which for layers of 500–1000 m thickness, suggests ash concentrations in the range 0.1–10 mg m-3, and therefore represent a potential hazard to aviation.Little SO2 was detected at the start of the eruption, although both OMI and AIRS detected upper-level SO2 on 15 April. By late April and early May, 0.1–0.3 Tg (SO2) could be detected using these sensors. The wealth of satellite data available, some in near real-time, and the ability of infrared and ultra-violet sensors to detect volcanic ash and SO2 are emphasised in this presentation. The ash/aviation problem can be addressed using remote sensing measurements, validated with ground-based and air-borne, and combined with dispersion modelling. The volcanic ash threat to aviation can be ameliorated by utilising these space-based resources

Emission and transport of bromocarbons: from the West Pacific ocean into the stratosphere

Oceanic emissions of halogenated very short-lived substances (VSLS) are expected to contribute significantly to the stratospheric halogen loading and therefore to ozone depletion. The amount of VSLS transported into the stratosphere is estimated based on in-situ observations around the tropical tropopause layer (TTL) and on modeling studies which mostly use prescribed global emission scenarios to reproduce observed atmospheric concentrations. In addition to upper-air VSLS measurements, direct observations of oceanic VSLS emissions are available along ship cruise tracks. Here we use such in-situ observations of VSLS emissions from the West Pacific and tropical Atlantic together with an atmospheric Lagrangian transport model to estimate the direct contribution of bromoform (CHBr3), and dibromomethane (CH2Br2) to the stratospheric bromine loading as well as their ozone depletion potential. Our emission-based estimates of VSLS profiles are compared to upper-air observations and thus link observed oceanic emissions and in situ TTL measurements. This comparison determines how VSLS emissions and transport in the cruise track regions contribute to global upper-air VSLS estimates. The West Pacific emission-based profiles and the global upper-air observations of CHBr3 show a relatively good agreement indicating that emissions from the West Pacific provide an average contribution to the global CHBr3 budget. The tropical Atlantic, although also being a CHBr3 source region, is of less importance for global upper-air CHBr3 estimates as revealed by the small emission-based abundances in the TTL. Western Pacific CH2Br2 emission-based estimates are considerably smaller than upper-air observations as a result of the relatively low sea-to-air flux found in the West Pacific. Together, CHBr3 and CH2Br2 emissions from the West Pacific are projected to contribute to the stratospheric bromine budget with 0.4 pptv Br on average and 2.3 pptv Br for cases of maximum emissions through product and source gas injection. These relatively low estimates reveal that the tropical West Pacific, although characterized by strong convective transport, might overall contribute less VSLS to the stratospheric bromine budget than other regions as a result of only low CH2Br2 and moderate CHBr3 oceanic emissions

Establishing Lagrangian connections between observations within air masses crossing the Atlantic during the International Consortium for Atmospheric Research on Transport and Transformation experiment

The ITCT-Lagrangian-2K4 (Intercontinental Transport and Chemical Transformation) experiment was conceived with an aim to quantify the effects of photochemistry and mixing on the transformation of air masses in the free troposphere away from emissions. To this end, attempts were made to intercept and sample air masses several times during their journey across the North Atlantic using four aircraft based in New Hampshire (USA), Faial (Azores) and Creil (France). This article begins by describing forecasts from two Lagrangian models that were used to direct the aircraft into target air masses. A novel technique then identifies Lagrangian matches between flight segments. Two independent searches are conducted: for Lagrangian model matches and for pairs of whole air samples with matching hydrocarbon fingerprints. The information is filtered further by searching for matching hydrocarbon samples that are linked by matching trajectories. The quality of these "coincident matches'' is assessed using temperature, humidity and tracer observations. The technique pulls out five clear Lagrangian cases covering a variety of situations and these are examined in detail. The matching trajectories and hydrocarbon fingerprints are shown, and the downwind minus upwind differences in tracers are discussed

Satellite detection of volcanic ash from Eyjafjallajökull and the threat to aviation

Earth orbiting satellites provide an excellent means for monitoring and measuring emissions from volcanic eruptions. The recent eruption of Eyjafjallajökull in Iceland on 14 April, 2010 and the subsequent movement of the ash clouds were tracked using a variety of satellite instruments as they moved over Europe. Data from the rapid sampling (every 15 minutes) SEVIRI on Meteosat Second Generation were especially useful during this event as the thermal channels between 10–12 micron could be used to detect the ash signal and perform quantitative ash retrievals of mass loadings, optical depths and effective particle size. Higher-spatial resolution ( 1 km2) information from the MODIS sensors on NASA’s Terra and Aqua platforms were also analysed to determine ash microphysics and also to provide ash cloud top height. High-spectral resolution data from the IASI and AIRS sensors showed that initially quantities of ice, potentially with ash cores, were present, and that multi-species retrievals could be performed by exploiting the spectral content of the data. Vertically resolved ash layers were detected using the Caliop lidar on board the Calipso platform. Ash was clearly detected over Europe using the infra-red sensors with mass loadings typically in the range 0.1–5 gm-2, which for layers of 500–1000 m thickness, suggests ash concentrations in the range 0.1–10 mg m-3, and therefore represent a potential hazard to aviation.Little SO2 was detected at the start of the eruption, although both OMI and AIRS detected upper-level SO2 on 15 April. By late April and early May, 0.1–0.3 Tg (SO2) could be detected using these sensors. The wealth of satellite data available, some in near real-time, and the ability of infrared and ultra-violet sensors to detect volcanic ash and SO2 are emphasised in this presentation. The ash/aviation problem can be addressed using remote sensing measurements, validated with ground-based and air-borne, and combined with dispersion modelling. The volcanic ash threat to aviation can be ameliorated by utilising these space-based resources

Satellite observations of long range transport of a large BrO plume in the Arctic

Ozone Depletion Events (ODE) during polar springtime are a well known phenomenon in the Arctic and Antarctic boundary layer. They are caused by the catalytic destruction of ozone by halogens producing reactive halogen oxides like bromine monoxide (BrO). The key halogen bromine can be rapidly transferred into the gas phase in an autocatalytic process – the so called "Bromine Explosion". However, the exact mechanism, which leads to an initial bromine release as well as the influence of transport and chemical processes on BrO, is still not clearly understood. <br><br> In this study, BrO measurements from the satellite instrument GOME-2 are used together with model calculations with the dispersion model FLEXPART to study an arctic BrO event in March 2007, which could be tracked over several days and a large area. Full BrO activation was observed within one day east of Siberia with subsequent transport to Hudson Bay. The event was linked to a cyclone with very high surface wind speeds, which could have been involved in the production and lifting of aerosols or blowing snow. Considering the short life time of BrO, transported aerosols or snow can also provide the surface for BrO recycling within the plume for several days. The evolution of the BrO plume could be reproduced by FLEXPART simulations of a passive tracer indicating that the activated air mass was transported all the way from Siberia to Hudson Bay. To localise the most probable transport height, model runs initialised in different heights have been performed showing similar transport patterns throughout the troposphere but best agreement with the measurements between the surface and 3 km. The influence of changes in tropopause height on measured BrO values has been considered, but cannot completely explain the observed high BrO values. Backward trajectories from the area of BrO initialisation show upward lifting from the surface up to 3 km and no indication for intrusion of stratospheric air. These observations are consistent with a scenario in which bromine in the air mass was activated on the surface within the cyclone, lifted upwards and transported over several thousand kilometres to Hudson Bay

The Protein Arginine Methyltransferases 1 and 5 affect Myc properties in glioblastoma stem cells

Protein Arginine (R) methylation is the most common post-translational methylation in mammalian cells. Protein Arginine Methyltransferases (PRMT) 1 and 5 dimethylate their substrates on R residues, asymmetrically and symmetrically, respectively. They are ubiquitously expressed and play fundamental roles in tumour malignancies, including glioblastoma multiforme (GBM) which presents largely deregulated Myc activity. Previously, we demonstrated that PRMT5 associates with Myc in GBM cells, modulating, at least in part, its transcriptional properties. Here we show that Myc/PRMT5 protein complex includes PRMT1, in both HEK293T and glioblastoma stem cells (GSCs). We demonstrate that Myc is both asymmetrically and symmetrically dimethylated by PRMT1 and PRMT5, respectively, and that these modifications differentially regulate its stability. Moreover, we show that the ratio between symmetrically and asymmetrically dimethylated Myc changes in GSCs grown in stem versus differentiating conditions. Finally, both PRMT1 and PRMT5 activity modulate Myc binding at its specific target promoters. To our knowledge, this is the first work reporting R asymmetrical and symmetrical dimethylation as novel Myc post-translational modifications, with different functional properties. This opens a completely unexplored field of investigation in Myc biology and suggests symmetrically dimethylated Myc species as novel diagnostic and prognostic markers and druggable therapeutic targets for GBM