The late Ordovician Soom Shale Lagerstȁtte: an extraordinary post-glacial fossil and sedimentary record

Fossils of the Late Ordovician Soom Shale Lagerstätte are characterized by exceptional preservation of their soft tissues in clay minerals. The low-diversity community lived in an unusual cold-water setting, dominated by anoxic bottom waters, in the immediate aftermath of the Hirnantian glaciation. Giant conodonts represented by complete tooth sets, and one with trunk musculature and liver preserved, unarmoured jawless fish, lobopods and enigmatic taxa are some of the more important fossils. Furthermore, this Lagerstätte also preserves biomineralized Ordovician taxa such as brachiopods, orthoconic nautiloids and trilobites. It is important in capturing the only known examples of many taxa, extending temporal ranges of others and providing a unique glimpse of a post-glacial refugium, at a time when other Lagerstätten are unknown

Systematic analysis of exceptionally preserved fossils: correlated patterns of decay and preservation

From Wiley via Jisc Publications RouterHistory: received 2020-12-18, accepted 2021-06-29, pub-electronic 2021-08-24Article version: VoRPublication status: PublishedFunder: Natural Environmental Research Council; Grant(s): NE/E015336/1, NE/K004557/1Abstract: The fossil record of non‐biomineralized animals and tissues provides important insight into deep‐time evolutionary events. Interpretation of these highly variable remains requires an understanding of how both decay and preservation lead to fossilization. Here we establish a quantitative approach that unites data from decay experiments of extant taxa with preservation mode of fossils, allowing evaluation of both information loss and information retention, and their interaction, in non‐biomineralized fossils. We illustrate our approach using fossil data from two Lagerstätten with distinct taphonomic regimes, one characterized by phosphatization, and the other by pyritization of non‐biomineralized tissues. This demonstrates that frequency of occurrence of characters in fossil taxa is significantly correlated with sequences of character decay observed in extant comparator organisms, and that decay prone and decay resistant characters have distinct preservation modes; the former are mineralized and the latter are organically preserved. The methods and principles applied here to non‐biomineralized vertebrates are applicable to other exceptionally‐preserved fossils and allow for identification of systematic biases in fossil specimen completeness, character retention and the mode of their preservation. Furthermore, our analyses validates experimental decay in supporting the interpretation of anatomy in non‐biomineralized fossils

Experimental analysis of soft-tissue fossilization – opening the black box

Taphonomic experiments provide important insights into fossils that preserve the remains of decay‐prone soft tissues, tissues that are usually degraded and lost prior to fossilization. These fossils are among the most scientifically valuable evidence of ancient life on Earth, giving us a view into the past that is much less biased and incomplete than the picture provided by skeletal remains alone. Although the value of taphonomic experiments is beyond doubt, a lack of clarity regarding their purpose and limitations, and ambiguity in the use of terminology, are hampering progress. Here we distinguish between processes that promote information retention and those that promote information loss, in order to clarify the distinction between fossilization and preservation. Recognizing distinct processes of decay, mineralization and maturation, the sequence in which they act, and the potential for interactions, has important consequences for analysis of fossils, and for the design of taphonomic experiments. The purpose of well‐designed taphonomic experiments is generally to understand decay, maturation and preservation individually, thus limiting the number of variables involved. Much work remains to be done, but these methodologically reductionist foundations will allow researchers to build towards more complex taphonomic experiments and a more holistic understanding and analysis of the interactions between decay, maturation and preservation in the fossilization of non‐biomineralized remains. Our focus must remain on the key issue of understanding what exceptionally preserved fossils reveal about the history of biodiversity and evolution, rather than on debating the scope and value of an experimental approach

An early Cambrian greenhouse climate

The oceans of the early Cambrian (~541 to 509 million years ago) were the setting for a marked diversification of animal life. However, sea temperatures — a key component of the early Cambrian marine environment — remain unconstrained, in part because of a substantial time gap in the stable oxygen isotope (delta 18 O) record before the evolution of euconodonts. We show that previously overlooked sources of fossil biogenic phosphate have the potential to fill this gap. Pristine phosphatic microfossils from the Comley Limestones, UK, yield a robust delta 18 O signature, suggesting sea surface temperatures of 20° to 25°C at high southern paleolatitudes (~65°S to 70°S) between ~514 and 509 million years ago. These sea temperatures are consistent with the distribution of coeval evaporite and calcrete deposits, peak continental weathering rates, and also our climate model simulations for this interval. Our results support an early Cambrian greenhouse climate comparable to those of the late Mesozoic and early Cenozoic, offering a framework for exploring the interplay between biotic and environmental controls on Cambrian animal diversification

Experimental analysis of soft-tissue fossilization: opening the black box

Taphonomic experiments provide important insights into fossils that preserve the remains of decay-prone soft tissues, tissues that are usually degraded and lost prior to fossilization. These fossils are among the most scientifically valuable evidence of ancient life on Earth, giving us a view into the past that is much less biased and incomplete than the picture provided by skeletal remains alone. Although the value of taphonomic experiments is beyond doubt, a lack of clarity regarding their purpose and limitations, and ambiguity in the use of terminology, are hampering progress. Here we distinguish between processes that promote information retention and those that promote information loss, in order to clarify the distinction between fossilization and preservation. Recognizing distinct processes of decay, mineralization and maturation, the sequence in which they act, and the potential for interactions, has important consequences for analysis of fossils, and for the design of taphonomic experiments. The purpose of well-designed taphonomic experiments is generally to understand decay, maturation and preservation individually, thus limiting the number of variables involved. Much work remains to be done, but these methodologically reductionist foundations will allow researchers to build towards more complex taphonomic experiments and a more holistic understanding and analysis of the interactions between decay, maturation and preservation in the fossilization of non-biomineralized remains. Our focus must remain on the key issue of understanding what exceptionally preserved fossils reveal about the history of biodiversity and evolution, rather than on debating the scope and value of an experimental approach

Ancient amino acids from fossil feathers in amber

Ancient protein analysis is a rapidly developing field of research. Proteins ranging in age from the Quaternary to Jurassic are being used to answer questions about phylogeny, evolution, and extinction. However, these analyses are sometimes contentious, and focus primarily on large vertebrates in sedimentary fossilisation environments; there are few studies of protein preservation in fossils in amber. Here we show exceptionally slow racemisation rates during thermal degradation experiments of resin enclosed feathers, relative to previous thermal degradation experiments of ostrich eggshell, coral skeleton, and limpet shell. We also recover amino acids from two specimens of fossil feathers in amber. The amino acid compositions are broadly similar to those of degraded feathers, but concentrations are very low, suggesting that much of the original protein has been degraded and lost. High levels of racemisation in more apolar, slowly racemising amino acids suggest that some of the amino acids were ancient and therefore original. Our findings indicate that the unique fossilisation environment inside amber shows potential for the recovery of ancient amino acids and proteins

Unlocking preservation bias in the amber insect fossil record through experimental decay.

Fossils entombed in amber are a unique resource for reconstructing forest ecosystems, and resolving relationships of modern taxa. Such fossils are famous for their perfect, life-like appearance. However, preservation quality is vast with many sites showing only cuticular preservation, or no fossils. The taphonomic processes that control this range are largely unknown; as such, we know little about potential bias in this important record. Here we employ actualistic experiments, using, fruit flies and modern tree resin to determine whether resin type, gut microbiota, and dehydration prior to entombment affects decay. We used solid phase microextraction gas chromatography-mass spectrometry (SPME GC-MS) to confirm distinct tree resin chemistry; gut microbiota of flies was modified using antibiotics and categorized though sequencing. Decay was assessed using phase contrast synchrotron tomography. Resin type demonstrates a significant control on decay rate. The composition of the gut microbiota was also influential, with minor changes in composition affecting decay rate. Dehydration prior to entombment, contrary to expectations, enhanced decay. Our analyses show that there is potential significant bias in the amber fossil record, especially between sites with different resin types where ecological completeness and preservational fidelity are likely affected