Alongshore current over variable beach topography

The nonlinear dynamics of unstable alongshore currents in the nearshore surf zone over variable barred beach topography are studied using numerical experiments. These experiments extend the recent studies of Allen et al. [1996] and Slnn et al. [1998], which utilized alongshore uniform beach topographies by including sinusoidal alongshore variation to shore parallel sandbars. The model involves finite difference solutions to the nonlinear shallow water equations for forced, dissipative, initial value problems and employs periodic boundary conditions in the alongshore direction. Effects of dissipation are modeled by linear bottom friction. Forcing for the alongshore currents is provided by gradients in the radiation stress, which are specified using linear theory and the dissipation function for breaking waves formulated by Thornton and Cuza [1983]. Distinct flows develop depending on the amplitude c and wavelength λ of the topographic variability and the dimensionless parameter Q, the ratio of an advective to a frictional timescale. For Q greater than a critical value Qc the flows are linearly stable. For ∆Q = Qc- Q > 0 the flow can be unstable. For small values of ∆Q the effect of increasing is to stabilize or regularize the flows and to cause the mean flow to approximately follow contours of constant depth. Equilibrated shear waves develop that propagate along the mean current path at phase speeds and wavelengths that are close to predictions for the most unstable mode from linear theory applied to alongshore-averaged conditions. At intermediate values of ∆Q, unsteady vortices form and exhibit nonlinear interactions as they propagate along the mean current path, occasionally merging, pairing, or being shed seaward of the sandbar. Eddies preferentially form in the mean current when approaching alongshore troughs of the sandbar and break free from the mean current when approaching alongshore crests of the sandbar. At the largest values of ∆Q examined the resulting flow fields resemble a turbulent shear flow and are less strongly influenced by the alongshore variability in topography. As the amplitude of the alongshore topographic variability increases, alongshore wavenumber-frequency spectra of the across-shore velocity show a corresponding increase in energy at both higher aiongshore wavenumbers and over a broader frequency range with significant energy at wavenumbers of topographic variability and harmonics. Across-shore fluxes of mass and momentum generally increase with increasing topographic amplitude and increasing ∆Q. Time- and space-lagged correlations of the across-shore velocity show that correlation length scales decrease as topographic perturbation amplitudes increase. Terms from the vorticity equation show that the alongshore variation of the radiation stresses and the value of ∆Q are of importance to the flow behavior. Hybrid experiments separating effects of spatially variable forcing and the dynamic influence of topography on time-averaged currents show that the effects are generally comparable with the relative importance of each effect a function of ∆Q. The results show that topographic variability has a significant influence on nearshore circulation.Copyrighted by American Geophysical Union

Abiotic formation of O2 and O3 in high-CO2 terrestrial atmospheres

Previous research has indicated that high amounts of ozone (O3) and oxygen (O2) may be produced abiotically in atmospheres with high concentrations of CO2. The abiotic production of these two gases, which are also characteristic of photosynthetic life processes, could pose a potential "false-positive" for remote-sensing detection of life on planets around other stars.We show here that such false positives are unlikely on any planet that possesses abundant liquid water, as rainout of oxidized species onto a reduced planetary surface should ensure that atmospheric H2 concentrations remain relatively high, and that O2 and O3 remain low. Our aim is to determine the amount of O3 and O2 formed in a high CO2 atmosphere for a habitable planet without life. We use a photochemical model that considers hydrogen (H2) escape and a detailed hydrogen balance to calculate the O2 and O3 formed on planets with 0.2 of CO2 around the Sun, and 0.02, 0.2 and 2 bars of CO2 around a young Sun-like star with higher UV radiation. The concentrations obtained by the photochemical model were used as input in a radiative transfer model that calculated the spectra of the modeled planets. The O3 and O2 concentrations in the simulated planets are extremely small, and unlikely to produce a detectable signature in the spectra of those planets. We conclude that with a balanced hydrogen budget, and for planets with an active hydrological cycle, abiotic formation of O2 and O3 is unlikely to create a possible false positive for life detection in either the visible/near-infrared or mid-infrared wavelength regimes.Comment: 27 pages, 15 figures, Astronomy & Astrophysics accepte

A randomized, multicenter, open-label, blinded end point trial comparing the effects of spironolactone to chlorthalidone on left ventricular mass in patients with early-stage chronic kidney disease: Rationale and design of the SPIRO-CKD trial

Background Chronic kidney disease (CKD) is associated with increased left ventricular (LV) mass and arterial stiffness. In a previous trial, spironolactone improved these end points compared with placebo in subjects with early-stage CKD, but it is not known whether these effects were specific to the drug or secondary to blood pressure lowering. Aim The aim was to investigate the hypothesis that spironolactone is superior to chlorthalidone in the reduction of LV mass while exerting similar effects on blood pressure. Design This is a multicenter, prospective, randomized, open-label, blinded end point clinical trial initially designed to compare the effects of 40 weeks of treatment with spironolactone 25 mg once daily to chlorthalidone 25 mg once daily on the co-primary end points of change in pulse wave velocity and change in LV mass in 350 patients with stages 2 and 3 CKD on established treatment with an angiotensin-converting enzyme inhibitor or an angiotensin receptor blocker. Because of slow recruitment rates, it became apparent that it would not be possible to recruit this sample size within the funded time period. The study design was therefore changed to one with a single primary end point of LV mass requiring 150 patients. Recruitment was completed on 31 December 2016, at which time 154 patients had been recruited. Investigations included cardiac magnetic resonance imaging, applanation tonometry, 24-hour ambulatory blood pressure monitoring, and laboratory tests. Subjects are assessed before and after 40 weeks of randomly allocated drug therapy and at 46 weeks after discontinuation of the study drug.We acknowledge the assistance and facilities provided by the NIHR/Wellcome Trust Birmingham Clinical Research Facility

The effect of atmospheric acid processing on the global deposition of bioavailable phosphorus from dust

The role of dust as a source of bioavailable phosphorus (Bio-P) is quantified using a new parameterization for apatite dissolution in combination with global soil data maps and a global aerosol transport model. Mineral dust provides 31.2 Gg-P yr-1 of Bio-P to the oceans, with 14.3 Gg-P yr-1 from labile P present in the dust, and an aditional 16.9 Gg-P yr from acid dissolution of apatite in the atmosphere, representing an increase of 120%. The North Atlantic, north west Pacific, and Mediterranean Sea are identified as important sites of Bio-P deposition from mineral dust. The acid dissolution process increases the fraction of total-P that is bioavailable from ~10% globally from the labile pool to 23% in the Atlantic Ocean, 45% in the Pacific Ocean, and 21% in the Indian Ocean, with an ocean global mean value of 22%. Strong seasonal variations, especially in the North Pacific, northwest Atlantic, and Indian Ocean, are driven by large-scale meteorology and pollution sources from industrial and biomass-burning regions. Globally constant values of total-P content and bioavailable fraction used previously do not capture the simulated variability. We find particular sensitivity to the representation of particle-to-particle variability of apatite, which supplies Bio-P through acid-dissolution, and calcium carbonate, which helps to buffer the dissolution process. A modest 10% external mixing results in an increase of Bio-P deposition by 18%. The total Bio-P calculated here (31.2 Gg-P yr-1) represents a minimum compared to previous estimates due to the relatively low total-P in the global soil map used

Circulating microRNAs in sera correlate with soluble biomarkers of immune activation but do not predict mortality in ART treated individuals with HIV-1 infection: A case control study

Introduction: The use of anti-retroviral therapy (ART) has dramatically reduced HIV-1 associated morbidity and mortality. However, HIV-1 infected individuals have increased rates of morbidity and mortality compared to the non-HIV-1 infected population and this appears to be related to end-organ diseases collectively referred to as Serious Non-AIDS Events (SNAEs). Circulating miRNAs are reported as promising biomarkers for a number of human disease conditions including those that constitute SNAEs. Our study sought to investigate the potential of selected miRNAs in predicting mortality in HIV-1 infected ART treated individuals. Materials and Methods: A set of miRNAs was chosen based on published associations with human disease conditions that constitute SNAEs. This case: control study compared 126 cases (individuals who died whilst on therapy), and 247 matched controls (individuals who remained alive). Cases and controls were ART treated participants of two pivotal HIV-1 trials. The relative abundance of each miRNA in serum was measured, by RTqPCR. Associations with mortality (all-cause, cardiovascular and malignancy) were assessed by logistic regression analysis. Correlations between miRNAs and CD4+ T cell count, hs-CRP, IL-6 and D-dimer were also assessed. Results: None of the selected miRNAs was associated with all-cause, cardiovascular or malignancy mortality. The levels of three miRNAs (miRs -21, -122 and -200a) correlated with IL-6 while miR-21 also correlated with D-dimer. Additionally, the abundance of miRs -31, -150 and -223, correlated with baseline CD4+ T cell count while the same three miRNAs plus miR- 145 correlated with nadir CD4+ T cell count. Discussion: No associations with mortality were found with any circulating miRNA studied. These results cast doubt onto the effectiveness of circulating miRNA as early predictors of mortality or the major underlying diseases that contribute to mortality in participants treated for HIV-1 infection